Task 38649836

Name test_98-GPUGRID_TEST_ATM_4STEP_20261023-2-4-RND1544_0
Workunit 31594407
Created 23 Oct 2026, 22:12:06 UTC
Sent 23 Oct 2026, 22:40:12 UTC
Report deadline 28 Oct 2026, 22:40:12 UTC
Received 24 Oct 2026, 0:38:49 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 651905
Run time 36 min 14 sec
CPU time 29 min 44 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 15,624.74 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 732.91 MB
Peak swap size 6.90 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
03:03:15 (43404): wrapper (7.9.26016): starting
03:03:15 (43404): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
03:03:16 (43404): Library/usr/bin/tar.exe exited; CPU time 0.000000
03:03:16 (43404): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
03:38:29 (43404): C:/Windows/system32/cmd.exe exited; CPU time 1784.125000
03:38:29 (43404): called boinc_finish(0)
0 bytes in 0 Free Blocks.
566 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 30052039 bytes.
Dumping objects ->
{3835555} normal block at 0x000001E0BABA3CA0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835544} normal block at 0x000001E0BABA4100, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835533} normal block at 0x000001E0B8D95290, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835522} normal block at 0x000001E0B8D95220, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835511} normal block at 0x000001E0B8D95450, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835480} normal block at 0x000001E0BAB1B5C0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835469} normal block at 0x000001E0BAA40AB0, 155 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835466} normal block at 0x000001E0B8D8E030, 8 bytes long.
 Data: <  &#134;&#186;&#224;   > 00 00 86 BA E0 01 00 00 
{3834693} normal block at 0x000001E0BAA40730, 155 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833961} normal block at 0x000001E0B8D8E5D0, 8 bytes long.
 Data: < &#187;&#219;&#184;&#224;   > 20 BB DB B8 E0 01 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x000001E0B8D91E60, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001E0B8D86EA0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x000001E0B8D96980, 16 bytes long.
 Data: <8p&#217;&#184;&#224;           > 38 70 D9 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001E0B8D96200, 16 bytes long.
 Data: < p&#217;&#184;&#224;           > 10 70 D9 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001E0B8D90530, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x000001E0B8D96110, 16 bytes long.
 Data: <&#232;o&#217;&#184;&#224;           > E8 6F D9 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001E0B8D96890, 16 bytes long.
 Data: <&#192;o&#217;&#184;&#224;           > C0 6F D9 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001E0B8D95E40, 16 bytes long.
 Data: < o&#217;&#184;&#224;           > 98 6F D9 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001E0B8D96070, 16 bytes long.
 Data: <po&#217;&#184;&#224;           > 70 6F D9 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001E0B8D95140, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x000001E0B8D962F0, 16 bytes long.
 Data: <h&#150;&#216;&#184;&#224;           > 68 96 D8 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001E0B8D901D0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x000001E0B8D96430, 16 bytes long.
 Data: <@&#150;&#216;&#184;&#224;           > 40 96 D8 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001E0B8D95F80, 16 bytes long.
 Data: < &#150;&#216;&#184;&#224;           > 18 96 D8 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001E0B8D95DF0, 16 bytes long.
 Data: <&#240;&#149;&#216;&#184;&#224;           > F0 95 D8 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001E0B8D95DA0, 16 bytes long.
 Data: <&#200;&#149;&#216;&#184;&#224;           > C8 95 D8 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001E0B8D963E0, 16 bytes long.
 Data: <&#160;&#149;&#216;&#184;&#224;           > A0 95 D8 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001E0B8D95FD0, 16 bytes long.
 Data: <x&#149;&#216;&#184;&#224;           > 78 95 D8 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001E0B8D8FF90, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x000001E0B8D96AC0, 16 bytes long.
 Data: <P&#149;&#216;&#184;&#224;           > 50 95 D8 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001E0B8D89550, 320 bytes long.
 Data: <&#192;j&#217;&#184;&#224;   &#144;&#255;&#216;&#184;&#224;   > C0 6A D9 B8 E0 01 00 00 90 FF D8 B8 E0 01 00 00 
{276} normal block at 0x000001E0B8D967F0, 16 bytes long.
 Data: <Po&#217;&#184;&#224;           > 50 6F D9 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001E0B8D96C50, 16 bytes long.
 Data: <(o&#217;&#184;&#224;           > 28 6F D9 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001E0B8D903B0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x000001E0B8D96840, 16 bytes long.
 Data: < o&#217;&#184;&#224;           > 00 6F D9 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001E0B8D8FCF0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x000001E0B8D967A0, 16 bytes long.
 Data: <Hn&#217;&#184;&#224;           > 48 6E D9 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001E0B8D95D50, 16 bytes long.
 Data: < n&#217;&#184;&#224;           > 20 6E D9 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001E0B8D96CA0, 16 bytes long.
 Data: <&#248;m&#217;&#184;&#224;           > F8 6D D9 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001E0B8D96020, 16 bytes long.
 Data: <&#208;m&#217;&#184;&#224;           > D0 6D D9 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001E0B8D96390, 16 bytes long.
 Data: <&#168;m&#217;&#184;&#224;           > A8 6D D9 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001E0B8D96930, 16 bytes long.
 Data: <&#128;m&#217;&#184;&#224;           > 80 6D D9 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001E0B8D96610, 16 bytes long.
 Data: <&#240;V&#217;&#184;&#224;           > F0 56 D9 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001E0B8D956F0, 40 bytes long.
 Data: < f&#217;&#184;&#224;   &#192;&#181;&#177;&#186;&#224;   > 10 66 D9 B8 E0 01 00 00 C0 B5 B1 BA E0 01 00 00 
{262} normal block at 0x000001E0B8D96700, 16 bytes long.
 Data: <`m&#217;&#184;&#224;           > 60 6D D9 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001E0B8D96BB0, 16 bytes long.
 Data: <8m&#217;&#184;&#224;           > 38 6D D9 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001E0B8D905F0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x000001E0B8D96C00, 16 bytes long.
 Data: < m&#217;&#184;&#224;           > 10 6D D9 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001E0B8D96D10, 992 bytes long.
 Data: < l&#217;&#184;&#224;   &#240; &#217;&#184;&#224;   > 00 6C D9 B8 E0 01 00 00 F0 05 D9 B8 E0 01 00 00 
{94} normal block at 0x000001E0B8D908F0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x000001E0B8D8DFE0, 16 bytes long.
 Data: <&#128;&#244;&#216;&#184;&#224;           > 80 F4 D8 B8 E0 01 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x000001E0B8D8F480, 40 bytes long.
 Data: <&#224;&#223;&#216;&#184;&#224;   &#240; &#217;&#184;&#224;   > E0 DF D8 B8 E0 01 00 00 F0 08 D9 B8 E0 01 00 00 
{71} normal block at 0x000001E0B8D8DE50, 16 bytes long.
 Data: <&#128;&#234;/#&#247;           > 80 EA 2F 23 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001E0B8D8E580, 16 bytes long.
 Data: <@&#233;/#&#247;           > 40 E9 2F 23 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001E0B8D8E530, 16 bytes long.
 Data: <&#248;W,#&#247;           > F8 57 2C 23 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001E0B8D8DE00, 16 bytes long.
 Data: <&#216;W,#&#247;           > D8 57 2C 23 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001E0B8D8E3A0, 16 bytes long.
 Data: <P ,#&#247;           > 50 04 2C 23 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001E0B8D8E4E0, 16 bytes long.
 Data: <0 ,#&#247;           > 30 04 2C 23 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001E0B8D8E490, 16 bytes long.
 Data: <&#224; ,#&#247;           > E0 02 2C 23 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001E0B8D8E670, 16 bytes long.
 Data: <  ,#&#247;           > 10 04 2C 23 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001E0B8D8DD60, 16 bytes long.
 Data: <p ,#&#247;           > 70 04 2C 23 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001E0B8D8DF40, 16 bytes long.
 Data: < &#192;*#&#247;           > 18 C0 2A 23 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


©2026 Universitat Pompeu Fabra