Task 38648226

Name test_62-GPUGRID_TEST_ATM_40STEP_20261023-0-40-RND0522_0
Workunit 31592935
Created 23 Oct 2026, 20:34:49 UTC
Sent 23 Oct 2026, 22:57:01 UTC
Report deadline 28 Oct 2026, 22:57:01 UTC
Received 23 Oct 2026, 23:35:48 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 622627
Run time 37 min 29 sec
CPU time 34 min 2 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 20,317.22 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 720.66 MB
Peak swap size 9.92 GB
Peak disk usage 2.97 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
19:58:50 (11180): wrapper (7.9.26016): starting
19:58:50 (11180): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
19:58:51 (11180): Library/usr/bin/tar.exe exited; CPU time 0.031250
19:58:51 (11180): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\2\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\2\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
20:35:06 (11180): C:/Windows/system32/cmd.exe exited; CPU time 2042.703125
20:35:06 (11180): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 37505359 bytes.
Dumping objects ->
{3835223} normal block at 0x000001E4BC830D10, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835212} normal block at 0x000001E4BC8307D0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835201} normal block at 0x000001E4BC8316B0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835190} normal block at 0x000001E4BC830CA0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835179} normal block at 0x000001E4BC8311E0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835148} normal block at 0x000001E4BC8DB580, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835135} normal block at 0x000001E4BACCCC80, 8 bytes long.
 Data: <  &#202;&#186;&#228;   > 00 00 CA BA E4 01 00 00 
{3833977} normal block at 0x000001E4BACCC960, 8 bytes long.
 Data: <P&#235;&#131;&#188;&#228;   > 50 EB 83 BC E4 01 00 00 
..\zip\boinc_zip.cpp(122) : {320} normal block at 0x000001E4BACCDCC0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{305} normal block at 0x000001E4BACC6E80, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{304} normal block at 0x000001E4BACD48B0, 16 bytes long.
 Data: <&#232;U&#205;&#186;&#228;           > E8 55 CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{303} normal block at 0x000001E4BACD42C0, 16 bytes long.
 Data: <&#192;U&#205;&#186;&#228;           > C0 55 CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{302} normal block at 0x000001E4BACCEE60, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{301} normal block at 0x000001E4BACD4AE0, 16 bytes long.
 Data: < U&#205;&#186;&#228;           > 98 55 CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x000001E4BACD3F50, 16 bytes long.
 Data: <pU&#205;&#186;&#228;           > 70 55 CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x000001E4BACD3F00, 16 bytes long.
 Data: <HU&#205;&#186;&#228;           > 48 55 CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000001E4BACD46D0, 16 bytes long.
 Data: < U&#205;&#186;&#228;           > 20 55 CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001E4BACCF7A0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{296} normal block at 0x000001E4BACD4DB0, 16 bytes long.
 Data: < =&#205;&#186;&#228;           > 98 3D CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001E4BACCE7A0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{294} normal block at 0x000001E4BACD4A40, 16 bytes long.
 Data: <p=&#205;&#186;&#228;           > 70 3D CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001E4BACD49A0, 16 bytes long.
 Data: <H=&#205;&#186;&#228;           > 48 3D CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001E4BACD4D10, 16 bytes long.
 Data: < =&#205;&#186;&#228;           > 20 3D CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001E4BACD4CC0, 16 bytes long.
 Data: <&#248;<&#205;&#186;&#228;           > F8 3C CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001E4BACD4040, 16 bytes long.
 Data: <&#208;<&#205;&#186;&#228;           > D0 3C CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001E4BACD4E00, 16 bytes long.
 Data: <&#168;<&#205;&#186;&#228;           > A8 3C CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001E4BACCF3A0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{286} normal block at 0x000001E4BACD4810, 16 bytes long.
 Data: < <&#205;&#186;&#228;           > 80 3C CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001E4BACD3C80, 320 bytes long.
 Data: < H&#205;&#186;&#228;   &#160;&#243;&#204;&#186;&#228;   > 10 48 CD BA E4 01 00 00 A0 F3 CC BA E4 01 00 00 
{284} normal block at 0x000001E4BACD4A90, 16 bytes long.
 Data: < U&#205;&#186;&#228;           > 00 55 CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001E4BACD4270, 16 bytes long.
 Data: <&#216;T&#205;&#186;&#228;           > D8 54 CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001E4BACCEF80, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{281} normal block at 0x000001E4BACD4450, 16 bytes long.
 Data: <&#176;T&#205;&#186;&#228;           > B0 54 CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001E4BACCE6E0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{279} normal block at 0x000001E4BACD49F0, 16 bytes long.
 Data: <&#248;S&#205;&#186;&#228;           > F8 53 CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001E4BACD43B0, 16 bytes long.
 Data: <&#208;S&#205;&#186;&#228;           > D0 53 CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001E4BACD4360, 16 bytes long.
 Data: <&#168;S&#205;&#186;&#228;           > A8 53 CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001E4BACD4180, 16 bytes long.
 Data: < S&#205;&#186;&#228;           > 80 53 CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001E4BACD47C0, 16 bytes long.
 Data: <XS&#205;&#186;&#228;           > 58 53 CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001E4BACD4310, 16 bytes long.
 Data: <0S&#205;&#186;&#228;           > 30 53 CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001E4BACD4E50, 16 bytes long.
 Data: < &#248;&#204;&#186;&#228;           > 10 F8 CC BA E4 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001E4BACCF810, 40 bytes long.
 Data: <PN&#205;&#186;&#228;    &#181; &#188;&#228;   > 50 4E CD BA E4 01 00 00 80 B5 8D BC E4 01 00 00 
{270} normal block at 0x000001E4BACD4C20, 16 bytes long.
 Data: < S&#205;&#186;&#228;           > 10 53 CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001E4BACD4950, 16 bytes long.
 Data: <&#232;R&#205;&#186;&#228;           > E8 52 CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001E4BACCEE00, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{267} normal block at 0x000001E4BACD4BD0, 16 bytes long.
 Data: <&#192;R&#205;&#186;&#228;           > C0 52 CD BA E4 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001E4BACD52C0, 992 bytes long.
 Data: <&#208;K&#205;&#186;&#228;    &#238;&#204;&#186;&#228;   > D0 4B CD BA E4 01 00 00 00 EE CC BA E4 01 00 00 
{102} normal block at 0x000001E4BACCE620, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{101} normal block at 0x000001E4BACCC870, 16 bytes long.
 Data: <0&#247;&#204;&#186;&#228;           > 30 F7 CC BA E4 01 00 00 00 00 00 00 00 00 00 00 
{100} normal block at 0x000001E4BACCF730, 40 bytes long.
 Data: <p&#200;&#204;&#186;&#228;    &#230;&#204;&#186;&#228;   > 70 C8 CC BA E4 01 00 00 20 E6 CC BA E4 01 00 00 
{79} normal block at 0x000001E4BACCC820, 16 bytes long.
 Data: < &#234;+&#146;&#246;           > 80 EA 2B 92 F6 7F 00 00 00 00 00 00 00 00 00 00 
{78} normal block at 0x000001E4BACCC6E0, 16 bytes long.
 Data: <@&#233;+&#146;&#246;           > 40 E9 2B 92 F6 7F 00 00 00 00 00 00 00 00 00 00 
{77} normal block at 0x000001E4BACCC8C0, 16 bytes long.
 Data: <&#248;W(&#146;&#246;           > F8 57 28 92 F6 7F 00 00 00 00 00 00 00 00 00 00 
{76} normal block at 0x000001E4BACCC1E0, 16 bytes long.
 Data: <&#216;W(&#146;&#246;           > D8 57 28 92 F6 7F 00 00 00 00 00 00 00 00 00 00 
{75} normal block at 0x000001E4BACCCD70, 16 bytes long.
 Data: <P (&#146;&#246;           > 50 04 28 92 F6 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x000001E4BACCC910, 16 bytes long.
 Data: <0 (&#146;&#246;           > 30 04 28 92 F6 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x000001E4BACCCE10, 16 bytes long.
 Data: <&#224; (&#146;&#246;           > E0 02 28 92 F6 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x000001E4BACCC500, 16 bytes long.
 Data: <  (&#146;&#246;           > 10 04 28 92 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000001E4BACCC690, 16 bytes long.
 Data: <p (&#146;&#246;           > 70 04 28 92 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001E4BACCCC30, 16 bytes long.
 Data: < &#192;&&#146;&#246;           > 18 C0 26 92 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


©2026 Universitat Pompeu Fabra