Task 38648116

Name test_968-GPUGRID_TEST_ATM_4STEP_20261023-0-4-RND4663_0
Workunit 31592833
Created 23 Oct 2026, 20:31:11 UTC
Sent 23 Oct 2026, 22:02:52 UTC
Report deadline 28 Oct 2026, 22:02:52 UTC
Received 23 Oct 2026, 22:33:52 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 648901
Run time 27 min 16 sec
CPU time 25 min 2 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 20,670.50 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 698.80 MB
Peak swap size 8.42 GB
Peak disk usage 2.97 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
16:06:39 (488): wrapper (7.9.26016): starting
16:06:39 (488): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
16:06:40 (488): Library/usr/bin/tar.exe exited; CPU time 0.015625
16:06:40 (488): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\17\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\17\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
16:32:35 (488): C:/Windows/system32/cmd.exe exited; CPU time 1502.343750
16:32:35 (488): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 29109235 bytes.
Dumping objects ->
{3835198} normal block at 0x000001A3678D6810, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835187} normal block at 0x000001A3678D7370, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835176} normal block at 0x000001A3678D6F80, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835165} normal block at 0x000001A365B96F40, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835154} normal block at 0x000001A365B96ED0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835123} normal block at 0x000001A3678784B0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835110} normal block at 0x000001A365B8E2F0, 8 bytes long.
 Data: <  &#245;e&#163;   > 00 00 F5 65 A3 01 00 00 
{3833959} normal block at 0x000001A365B8DA30, 8 bytes long.
 Data: <0&#234;&#198;e&#163;   > 30 EA C6 65 A3 01 00 00 
..\zip\boinc_zip.cpp(122) : {311} normal block at 0x000001A365B91FC0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000001A365B86480, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{295} normal block at 0x000001A365B986F0, 16 bytes long.
 Data: <&#216;x&#185;e&#163;           > D8 78 B9 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001A365B97ED0, 16 bytes long.
 Data: <&#176;x&#185;e&#163;           > B0 78 B9 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001A365B8FD70, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{292} normal block at 0x000001A365B98330, 16 bytes long.
 Data: < x&#185;e&#163;           > 88 78 B9 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001A365B97E80, 16 bytes long.
 Data: <`x&#185;e&#163;           > 60 78 B9 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001A365B983D0, 16 bytes long.
 Data: <8x&#185;e&#163;           > 38 78 B9 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001A365B97CA0, 16 bytes long.
 Data: < x&#185;e&#163;           > 10 78 B9 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001A365B96FB0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{287} normal block at 0x000001A365B981F0, 16 bytes long.
 Data: <&#216;&#246;&#183;e&#163;           > D8 F6 B7 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001A365B8F9B0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{285} normal block at 0x000001A365B98970, 16 bytes long.
 Data: <&#176;&#246;&#183;e&#163;           > B0 F6 B7 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001A365B98420, 16 bytes long.
 Data: < &#246;&#183;e&#163;           > 88 F6 B7 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001A365B97AC0, 16 bytes long.
 Data: <`&#246;&#183;e&#163;           > 60 F6 B7 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001A365B97E30, 16 bytes long.
 Data: <8&#246;&#183;e&#163;           > 38 F6 B7 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001A365B98290, 16 bytes long.
 Data: < &#246;&#183;e&#163;           > 10 F6 B7 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001A365B97F20, 16 bytes long.
 Data: <&#232;&#245;&#183;e&#163;           > E8 F5 B7 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001A365B8FC50, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{277} normal block at 0x000001A365B97DE0, 16 bytes long.
 Data: <&#192;&#245;&#183;e&#163;           > C0 F5 B7 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001A365B7F5C0, 320 bytes long.
 Data: <&#224;}&#185;e&#163;   P&#252;&#184;e&#163;   > E0 7D B9 65 A3 01 00 00 50 FC B8 65 A3 01 00 00 
{275} normal block at 0x000001A365B97FC0, 16 bytes long.
 Data: <&#240;w&#185;e&#163;           > F0 77 B9 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001A365B97A70, 16 bytes long.
 Data: <&#200;w&#185;e&#163;           > C8 77 B9 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001A365B8F8F0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{272} normal block at 0x000001A365B984C0, 16 bytes long.
 Data: <&#160;w&#185;e&#163;           > A0 77 B9 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001A365B8F650, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{270} normal block at 0x000001A365B97D90, 16 bytes long.
 Data: <&#232;v&#185;e&#163;           > E8 76 B9 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001A365B98150, 16 bytes long.
 Data: <&#192;v&#185;e&#163;           > C0 76 B9 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001A365B97F70, 16 bytes long.
 Data: < v&#185;e&#163;           > 98 76 B9 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001A365B980B0, 16 bytes long.
 Data: <pv&#185;e&#163;           > 70 76 B9 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001A365B985B0, 16 bytes long.
 Data: <Hv&#185;e&#163;           > 48 76 B9 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001A365B8E250, 16 bytes long.
 Data: < v&#185;e&#163;           > 20 76 B9 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001A365B8E200, 16 bytes long.
 Data: < q&#185;e&#163;           > 00 71 B9 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001A365B97100, 40 bytes long.
 Data: < &#226;&#184;e&#163;   &#176;&#132;&#135;g&#163;   > 00 E2 B8 65 A3 01 00 00 B0 84 87 67 A3 01 00 00 
{261} normal block at 0x000001A365B8E1B0, 16 bytes long.
 Data: < v&#185;e&#163;           > 00 76 B9 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001A365B8E110, 16 bytes long.
 Data: <&#216;u&#185;e&#163;           > D8 75 B9 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001A365B8F470, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{258} normal block at 0x000001A365B8DDA0, 16 bytes long.
 Data: <&#176;u&#185;e&#163;           > B0 75 B9 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x000001A365B975B0, 992 bytes long.
 Data: <&#160;&#221;&#184;e&#163;   p&#244;&#184;e&#163;   > A0 DD B8 65 A3 01 00 00 70 F4 B8 65 A3 01 00 00 
{93} normal block at 0x000001A365B8FD10, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{92} normal block at 0x000001A365B8D620, 16 bytes long.
 Data: <Pr&#185;e&#163;           > 50 72 B9 65 A3 01 00 00 00 00 00 00 00 00 00 00 
{91} normal block at 0x000001A365B97250, 40 bytes long.
 Data: < &#214;&#184;e&#163;    &#253;&#184;e&#163;   > 20 D6 B8 65 A3 01 00 00 10 FD B8 65 A3 01 00 00 
{70} normal block at 0x000001A365B8DC60, 16 bytes long.
 Data: < &#234; =&#247;           > 80 EA 8D 3D F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001A365B8DFD0, 16 bytes long.
 Data: <@&#233; =&#247;           > 40 E9 8D 3D F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001A365B8D850, 16 bytes long.
 Data: <&#248;W&#138;=&#247;           > F8 57 8A 3D F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001A365B8DB20, 16 bytes long.
 Data: <&#216;W&#138;=&#247;           > D8 57 8A 3D F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001A365B8E160, 16 bytes long.
 Data: <P &#138;=&#247;           > 50 04 8A 3D F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001A365B8DE40, 16 bytes long.
 Data: <0 &#138;=&#247;           > 30 04 8A 3D F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001A365B8D580, 16 bytes long.
 Data: <&#224; &#138;=&#247;           > E0 02 8A 3D F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001A365B8DB70, 16 bytes long.
 Data: <  &#138;=&#247;           > 10 04 8A 3D F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001A365B8DAD0, 16 bytes long.
 Data: <p &#138;=&#247;           > 70 04 8A 3D F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001A365B8D760, 16 bytes long.
 Data: < &#192; =&#247;           > 18 C0 88 3D F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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