Task 38647766

Name test_648-GPUGRID_TEST_ATM_4STEP_20261023-0-4-RND7795_0
Workunit 31592493
Created 23 Oct 2026, 20:20:10 UTC
Sent 23 Oct 2026, 20:53:05 UTC
Report deadline 28 Oct 2026, 20:53:05 UTC
Received 24 Oct 2026, 0:18:52 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 654792
Run time 14 min 22 sec
CPU time 13 min 11 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 48,740.91 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 724.57 MB
Peak swap size 6.98 GB
Peak disk usage 2.97 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
01:58:34 (11040): wrapper (7.9.26016): starting
01:58:34 (11040): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
01:58:35 (11040): Library/usr/bin/tar.exe exited; CPU time 0.000000
01:58:35 (11040): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'F:\Festplattenpogramme\Boinc\Boincy\slots\16\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'F:\Festplattenpogramme\Boinc\Boincy\slots\16\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3835487} normal block at 0x0000023A45FA0EB0, 8 bytes long.
 Data: <  VF:   > 00 00 56 46 3A 02 00 00 
..\lib\diagnostics_win.cpp(417) : {3833956} normal block at 0x0000023A47D16900, 1080 bytes long.
 Data: <        @       > D0 0D 00 00 CD CD CD CD 40 01 00 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {310} normal block at 0x0000023A45FA22A0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
Object dump complete.
02:11:57 (22760): wrapper (7.9.26016): starting
02:11:57 (22760): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file F:\Festplattenpogramme\Boinc\Boincy\slots\16\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
02:18:34 (22760): C:/Windows/system32/cmd.exe exited; CPU time 383.031250
02:18:34 (22760): called boinc_finish(0)
0 bytes in 0 Free Blocks.
352 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 8877414 bytes.
Dumping objects ->
{1922} normal block at 0x0000027E914ED300, 64 bytes long.
 Data: <PATH=F:\Festplat> 50 41 54 48 3D 46 3A 5C 46 65 73 74 70 6C 61 74 
{1911} normal block at 0x0000027E914EC1C0, 64 bytes long.
 Data: <HOME=F:\Festplat> 48 4F 4D 45 3D 46 3A 5C 46 65 73 74 70 6C 61 74 
{1900} normal block at 0x0000027E914EC140, 64 bytes long.
 Data: <TMP=F:\Festplatt> 54 4D 50 3D 46 3A 5C 46 65 73 74 70 6C 61 74 74 
{1889} normal block at 0x0000027E914FE720, 64 bytes long.
 Data: <TEMP=F:\Festplat> 54 45 4D 50 3D 46 3A 5C 46 65 73 74 70 6C 61 74 
{1878} normal block at 0x0000027E914EE590, 64 bytes long.
 Data: <TMPDIR=F:\Festpl> 54 4D 50 44 49 52 3D 46 3A 5C 46 65 73 74 70 6C 
{1847} normal block at 0x0000027E914F6200, 80 bytes long.
 Data: <PATH=F:\Festplat> 50 41 54 48 3D 46 3A 5C 46 65 73 74 70 6C 61 74 
..\api\boinc_api.cpp(309) : {1834} normal block at 0x0000027E91505AA0, 8 bytes long.
 Data: <    ~   > 00 00 EF 92 7E 02 00 00 
{304} normal block at 0x0000027E91506090, 8 bytes long.
 Data: <0iP ~   > 30 69 50 91 7E 02 00 00 
{295} normal block at 0x0000027E914F68C0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{294} normal block at 0x0000027E91505E10, 16 bytes long.
 Data: <8hP ~           > 38 68 50 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000027E91506400, 16 bytes long.
 Data: < hP ~           > 10 68 50 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000027E915005E0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{291} normal block at 0x0000027E91505D70, 16 bytes long.
 Data: < gP ~           > E8 67 50 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000027E91505730, 16 bytes long.
 Data: < gP ~           > C0 67 50 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000027E91505BE0, 16 bytes long.
 Data: < gP ~           > 98 67 50 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000027E91505DC0, 16 bytes long.
 Data: <pgP ~           > 70 67 50 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000027E91504950, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{286} normal block at 0x0000027E91506040, 16 bytes long.
 Data: <  O ~           > F8 8F 4F 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000027E914FF8C0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{284} normal block at 0x0000027E91505910, 16 bytes long.
 Data: <  O ~           > D0 8F 4F 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000027E91505D20, 16 bytes long.
 Data: <  O ~           > A8 8F 4F 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000027E91505CD0, 16 bytes long.
 Data: <  O ~           > 80 8F 4F 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000027E915061D0, 16 bytes long.
 Data: <X O ~           > 58 8F 4F 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000027E91506180, 16 bytes long.
 Data: <0 O ~           > 30 8F 4F 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000027E91505550, 16 bytes long.
 Data: <  O ~           > 08 8F 4F 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000027E915006A0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{276} normal block at 0x0000027E91505AF0, 16 bytes long.
 Data: <  O ~           > E0 8E 4F 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000027E914F8EE0, 320 bytes long.
 Data: < ZP ~     P ~   > F0 5A 50 91 7E 02 00 00 A0 06 50 91 7E 02 00 00 
{274} normal block at 0x0000027E91505A50, 16 bytes long.
 Data: <PgP ~           > 50 67 50 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000027E91505F00, 16 bytes long.
 Data: <(gP ~           > 28 67 50 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000027E914FFD40, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{271} normal block at 0x0000027E91505A00, 16 bytes long.
 Data: < gP ~           > 00 67 50 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000027E914FF920, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{269} normal block at 0x0000027E91506270, 16 bytes long.
 Data: <HfP ~           > 48 66 50 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000027E91505960, 16 bytes long.
 Data: < fP ~           > 20 66 50 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000027E915059B0, 16 bytes long.
 Data: < eP ~           > F8 65 50 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000027E91505B90, 16 bytes long.
 Data: < eP ~           > D0 65 50 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000027E915055A0, 16 bytes long.
 Data: < eP ~           > A8 65 50 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000027E915058C0, 16 bytes long.
 Data: < eP ~           > 80 65 50 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000027E91505C80, 16 bytes long.
 Data: <0JP ~           > 30 4A 50 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000027E91504A30, 40 bytes long.
 Data: < \P ~    bO ~   > 80 5C 50 91 7E 02 00 00 00 62 4F 91 7E 02 00 00 
{260} normal block at 0x0000027E91505FF0, 16 bytes long.
 Data: <`eP ~           > 60 65 50 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000027E91505B40, 16 bytes long.
 Data: <8eP ~           > 38 65 50 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000027E91500340, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{257} normal block at 0x0000027E91506220, 16 bytes long.
 Data: < eP ~           > 10 65 50 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x0000027E91506510, 992 bytes long.
 Data: < bP ~   @ P ~   > 20 62 50 91 7E 02 00 00 40 03 50 91 7E 02 00 00 
{92} normal block at 0x0000027E914FFF80, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{91} normal block at 0x0000027E914FF020, 16 bytes long.
 Data: <  N ~           > 20 E5 4E 91 7E 02 00 00 00 00 00 00 00 00 00 00 
{90} normal block at 0x0000027E914EE520, 40 bytes long.
 Data: <  O ~     O ~   > 20 F0 4F 91 7E 02 00 00 80 FF 4F 91 7E 02 00 00 
{69} normal block at 0x0000027E914FEE90, 16 bytes long.
 Data: <                > 80 EA A6 EA F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000027E914FF520, 16 bytes long.
 Data: <@               > 40 E9 A6 EA F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000027E914FED50, 16 bytes long.
 Data: < W              > F8 57 A3 EA F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000027E914FEE40, 16 bytes long.
 Data: < W              > D8 57 A3 EA F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000027E914FF3E0, 16 bytes long.
 Data: <P               > 50 04 A3 EA F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000027E914FEAD0, 16 bytes long.
 Data: <0               > 30 04 A3 EA F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000027E914FF2F0, 16 bytes long.
 Data: <                > E0 02 A3 EA F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000027E914FF2A0, 16 bytes long.
 Data: <                > 10 04 A3 EA F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000027E914FE8F0, 16 bytes long.
 Data: <p               > 70 04 A3 EA F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000027E914FEB70, 16 bytes long.
 Data: <                > 18 C0 A1 EA F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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