Task 38646725

Name test_826-GPUGRID_TEST_ATM_1000_20261023-0-1-RND1759_0
Workunit 31591663
Created 23 Oct 2026, 16:45:33 UTC
Sent 23 Oct 2026, 17:54:17 UTC
Report deadline 28 Oct 2026, 17:54:17 UTC
Received 23 Oct 2026, 19:43:09 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 639300
Run time 1 hours 46 min 5 sec
CPU time 1 hours 44 min 26 sec
Validate state Valid
Credit 1,000.00
Device peak FLOPS 2,491.90 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 831.96 MB
Peak swap size 5.24 GB
Peak disk usage 2.97 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
13:56:04 (35764): wrapper (7.9.26016): starting
13:56:04 (35764): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
13:56:05 (35764): Library/usr/bin/tar.exe exited; CPU time 0.000000
13:56:05 (35764): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
15:40:44 (35764): C:/Windows/system32/cmd.exe exited; CPU time 6266.843750
15:40:44 (35764): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 103873113 bytes.
Dumping objects ->
{3835429} normal block at 0x000001ECEEAB1800, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835418} normal block at 0x000001ECEEAB0F40, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835407} normal block at 0x000001ECEEAB1480, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835396} normal block at 0x000001ECEEAB1AA0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835385} normal block at 0x000001ECEEAB1720, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835354} normal block at 0x000001ECEEC1AB20, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835341} normal block at 0x000001ECECFAF850, 8 bytes long.
 Data: <  &#245;&#236;&#236;   > 00 00 F5 EC EC 01 00 00 
{3833963} normal block at 0x000001ECECFAFE40, 8 bytes long.
 Data: < &#230; &#237;&#236;   > 10 E6 08 ED EC 01 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x000001ECECFACEF0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000001ECECFA3AC0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{297} normal block at 0x000001ECECFBA680, 16 bytes long.
 Data: <&#200;&#174;&#251;&#236;&#236;           > C8 AE FB EC EC 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000001ECECFBA630, 16 bytes long.
 Data: <&#160;&#174;&#251;&#236;&#236;           > A0 AE FB EC EC 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001ECECFB36F0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{294} normal block at 0x000001ECECFB9EB0, 16 bytes long.
 Data: <x&#174;&#251;&#236;&#236;           > 78 AE FB EC EC 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001ECECFB9E60, 16 bytes long.
 Data: <P&#174;&#251;&#236;&#236;           > 50 AE FB EC EC 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001ECECFBA860, 16 bytes long.
 Data: <(&#174;&#251;&#236;&#236;           > 28 AE FB EC EC 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001ECECFBA400, 16 bytes long.
 Data: < &#174;&#251;&#236;&#236;           > 00 AE FB EC EC 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001ECECFB5C00, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{289} normal block at 0x000001ECECFBA3B0, 16 bytes long.
 Data: <&#168;3&#250;&#236;&#236;           > A8 33 FA EC EC 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001ECECFB3510, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{287} normal block at 0x000001ECECFBA590, 16 bytes long.
 Data: < 3&#250;&#236;&#236;           > 80 33 FA EC EC 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001ECECFB9E10, 16 bytes long.
 Data: <X3&#250;&#236;&#236;           > 58 33 FA EC EC 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001ECECFB9DC0, 16 bytes long.
 Data: <03&#250;&#236;&#236;           > 30 33 FA EC EC 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001ECECFBAB30, 16 bytes long.
 Data: < 3&#250;&#236;&#236;           > 08 33 FA EC EC 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001ECECFB9C80, 16 bytes long.
 Data: <&#224;2&#250;&#236;&#236;           > E0 32 FA EC EC 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001ECECFBA360, 16 bytes long.
 Data: <&#184;2&#250;&#236;&#236;           > B8 32 FA EC EC 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001ECECFB4230, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{279} normal block at 0x000001ECECFBA220, 16 bytes long.
 Data: < 2&#250;&#236;&#236;           > 90 32 FA EC EC 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001ECECFA3290, 320 bytes long.
 Data: < &#162;&#251;&#236;&#236;   0B&#251;&#236;&#236;   > 20 A2 FB EC EC 01 00 00 30 42 FB EC EC 01 00 00 
{277} normal block at 0x000001ECECFBA810, 16 bytes long.
 Data: <&#224;&#173;&#251;&#236;&#236;           > E0 AD FB EC EC 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001ECECFBA7C0, 16 bytes long.
 Data: <&#184;&#173;&#251;&#236;&#236;           > B8 AD FB EC EC 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001ECECFB3E10, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{274} normal block at 0x000001ECECFBA310, 16 bytes long.
 Data: < &#173;&#251;&#236;&#236;           > 90 AD FB EC EC 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001ECECFB3690, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{272} normal block at 0x000001ECECFB9D70, 16 bytes long.
 Data: <&#216;&#172;&#251;&#236;&#236;           > D8 AC FB EC EC 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001ECECFBAAE0, 16 bytes long.
 Data: <&#176;&#172;&#251;&#236;&#236;           > B0 AC FB EC EC 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001ECECFBA2C0, 16 bytes long.
 Data: < &#172;&#251;&#236;&#236;           > 88 AC FB EC EC 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001ECECFBA270, 16 bytes long.
 Data: <`&#172;&#251;&#236;&#236;           > 60 AC FB EC EC 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001ECECFBA4A0, 16 bytes long.
 Data: <8&#172;&#251;&#236;&#236;           > 38 AC FB EC EC 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001ECECFB9D20, 16 bytes long.
 Data: < &#172;&#251;&#236;&#236;           > 10 AC FB EC EC 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001ECECFBA8B0, 16 bytes long.
 Data: <0^&#251;&#236;&#236;           > 30 5E FB EC EC 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001ECECFB5E30, 40 bytes long.
 Data: <&#176;&#168;&#251;&#236;&#236;    &#171;&#193;&#238;&#236;   > B0 A8 FB EC EC 01 00 00 20 AB C1 EE EC 01 00 00 
{263} normal block at 0x000001ECECFB9F00, 16 bytes long.
 Data: <&#240;&#171;&#251;&#236;&#236;           > F0 AB FB EC EC 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001ECECFBA450, 16 bytes long.
 Data: <&#200;&#171;&#251;&#236;&#236;           > C8 AB FB EC EC 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001ECECFB3AB0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{260} normal block at 0x000001ECECFBA770, 16 bytes long.
 Data: <&#160;&#171;&#251;&#236;&#236;           > A0 AB FB EC EC 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001ECECFBABA0, 992 bytes long.
 Data: <p&#167;&#251;&#236;&#236;   &#176;:&#251;&#236;&#236;   > 70 A7 FB EC EC 01 00 00 B0 3A FB EC EC 01 00 00 
{95} normal block at 0x000001ECECFB3C90, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{94} normal block at 0x000001ECECFB00C0, 16 bytes long.
 Data: <@Z&#251;&#236;&#236;           > 40 5A FB EC EC 01 00 00 00 00 00 00 00 00 00 00 
{93} normal block at 0x000001ECECFB5A40, 40 bytes long.
 Data: <&#192; &#251;&#236;&#236;    <&#251;&#236;&#236;   > C0 00 FB EC EC 01 00 00 90 3C FB EC EC 01 00 00 
{72} normal block at 0x000001ECECFAF760, 16 bytes long.
 Data: < &#234;[g&#247;           > 80 EA 5B 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000001ECECFB0070, 16 bytes long.
 Data: <@&#233;[g&#247;           > 40 E9 5B 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001ECECFAF990, 16 bytes long.
 Data: <&#248;WXg&#247;           > F8 57 58 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001ECECFAFB70, 16 bytes long.
 Data: <&#216;WXg&#247;           > D8 57 58 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001ECECFB0340, 16 bytes long.
 Data: <P Xg&#247;           > 50 04 58 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001ECECFAFD50, 16 bytes long.
 Data: <0 Xg&#247;           > 30 04 58 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001ECECFAF670, 16 bytes long.
 Data: <&#224; Xg&#247;           > E0 02 58 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001ECECFAFDF0, 16 bytes long.
 Data: <  Xg&#247;           > 10 04 58 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001ECECFB0390, 16 bytes long.
 Data: <p Xg&#247;           > 70 04 58 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001ECECFAFFD0, 16 bytes long.
 Data: < &#192;Vg&#247;           > 18 C0 56 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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