Task 38646570

Name test_674-GPUGRID_TEST_ATM_1000_20261023-0-1-RND2573_0
Workunit 31591511
Created 23 Oct 2026, 16:40:26 UTC
Sent 23 Oct 2026, 17:37:59 UTC
Report deadline 28 Oct 2026, 17:37:59 UTC
Received 23 Oct 2026, 19:53:46 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 615524
Run time 1 hours 45 min 11 sec
CPU time 1 hours 43 min 24 sec
Validate state Valid
Credit 1,000.00
Device peak FLOPS 2,238.46 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 672.02 MB
Peak swap size 5.20 GB
Peak disk usage 2.97 GB

Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
03:05:30 (33656): wrapper (7.9.26016): starting
03:05:30 (33656): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
03:05:31 (33656): Library/usr/bin/tar.exe exited; CPU time 0.000000
03:05:31 (33656): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'D:\BOINC\slots\12\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'D:\BOINC\slots\12\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
04:49:38 (33656): C:/Windows/system32/cmd.exe exited; CPU time 6204.843750
04:49:38 (33656): called boinc_finish(0)
0 bytes in 0 Free Blocks.
176 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 135909347 bytes.
Dumping objects ->
{3835350} normal block at 0x000001B65D9116B0, 48 bytes long.
 Data: <PATH=D:\BOINC\sl> 50 41 54 48 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835339} normal block at 0x000001B65DA52D40, 32 bytes long.
 Data: <HOME=D:\BOINC\sl> 48 4F 4D 45 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835328} normal block at 0x000001B65DA52200, 32 bytes long.
 Data: <TMP=D:\BOINC\slo> 54 4D 50 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 6F 
{3835317} normal block at 0x000001B65DA52140, 32 bytes long.
 Data: <TEMP=D:\BOINC\sl> 54 45 4D 50 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835306} normal block at 0x000001B65DA53160, 32 bytes long.
 Data: <TMPDIR=D:\BOINC\> 54 4D 50 44 49 52 3D 44 3A 5C 42 4F 49 4E 43 5C 
{3835275} normal block at 0x000001B65D910DF0, 48 bytes long.
 Data: <PATH=D:\BOINC\sl> 50 41 54 48 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 
..\api\boinc_api.cpp(309) : {3835262} normal block at 0x000001B65BA664E0, 8 bytes long.
 Data: <  >]&#182;   > 00 00 3E 5D B6 01 00 00 
{3834045} normal block at 0x000001B65BA66490, 8 bytes long.
 Data: < Y&#165;]&#182;   > 00 59 A5 5D B6 01 00 00 
..\zip\boinc_zip.cpp(122) : {309} normal block at 0x000001B65BA710B0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001B65BA71FF0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{293} normal block at 0x000001B65BA72CD0, 16 bytes long.
 Data: <&#216;3&#167;[&#182;           > D8 33 A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001B65BA729B0, 16 bytes long.
 Data: <&#176;3&#167;[&#182;           > B0 33 A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001B65BA6C6A0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{290} normal block at 0x000001B65BA72910, 16 bytes long.
 Data: < 3&#167;[&#182;           > 88 33 A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001B65BA727D0, 16 bytes long.
 Data: <`3&#167;[&#182;           > 60 33 A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001B65BA72870, 16 bytes long.
 Data: <83&#167;[&#182;           > 38 33 A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001B65BA72FA0, 16 bytes long.
 Data: < 3&#167;[&#182;           > 10 33 A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001B65BA6A870, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{285} normal block at 0x000001B65BA72780, 16 bytes long.
 Data: <  &#167;[&#182;           > 88 1F A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001B65BA6C940, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{283} normal block at 0x000001B65BA728C0, 16 bytes long.
 Data: <` &#167;[&#182;           > 60 1F A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001B65BA72960, 16 bytes long.
 Data: <8 &#167;[&#182;           > 38 1F A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001B65BA72FF0, 16 bytes long.
 Data: <  &#167;[&#182;           > 10 1F A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001B65BA726E0, 16 bytes long.
 Data: <  &#167;[&#182;           > E8 1E A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001B65BA72AF0, 16 bytes long.
 Data: <&#192; &#167;[&#182;           > C0 1E A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001B65BA72640, 16 bytes long.
 Data: <  &#167;[&#182;           > 98 1E A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001B65BA6C1C0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{275} normal block at 0x000001B65BA72E10, 16 bytes long.
 Data: <p &#167;[&#182;           > 70 1E A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001B65BA71E70, 320 bytes long.
 Data: < .&#167;[&#182;   &#192;&#193;&#166;[&#182;   > 10 2E A7 5B B6 01 00 00 C0 C1 A6 5B B6 01 00 00 
{273} normal block at 0x000001B65BA72A00, 16 bytes long.
 Data: < 2&#167;[&#182;           > F0 32 A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001B65BA72AA0, 16 bytes long.
 Data: <&#200;2&#167;[&#182;           > C8 32 A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001B65BA6C7C0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{270} normal block at 0x000001B65BA72820, 16 bytes long.
 Data: < 2&#167;[&#182;           > A0 32 A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001B65BA6C100, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{268} normal block at 0x000001B65BA725A0, 16 bytes long.
 Data: < 1&#167;[&#182;           > E8 31 A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001B65BA72D20, 16 bytes long.
 Data: <&#192;1&#167;[&#182;           > C0 31 A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001B65BA721E0, 16 bytes long.
 Data: < 1&#167;[&#182;           > 98 31 A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001B65BA72C30, 16 bytes long.
 Data: <p1&#167;[&#182;           > 70 31 A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001B65BA72370, 16 bytes long.
 Data: <H1&#167;[&#182;           > 48 31 A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001B65BA72550, 16 bytes long.
 Data: < 1&#167;[&#182;           > 20 31 A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001B65BA72320, 16 bytes long.
 Data: <&#192;&#169;&#166;[&#182;           > C0 A9 A6 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001B65BA6A9C0, 40 bytes long.
 Data: < #&#167;[&#182;      ]&#182;   > 20 23 A7 5B B6 01 00 00 F0 0D 91 5D B6 01 00 00 
{259} normal block at 0x000001B65BA72DC0, 16 bytes long.
 Data: < 1&#167;[&#182;           > 00 31 A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001B65BA72BE0, 16 bytes long.
 Data: <&#216;0&#167;[&#182;           > D8 30 A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x000001B65BA6BCE0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{256} normal block at 0x000001B65BA724B0, 16 bytes long.
 Data: <&#176;0&#167;[&#182;           > B0 30 A7 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000001B65BA730B0, 992 bytes long.
 Data: <&#176;$&#167;[&#182;    &#188;&#166;[&#182;   > B0 24 A7 5B B6 01 00 00 E0 BC A6 5B B6 01 00 00 
{91} normal block at 0x000001B65BA6C040, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{90} normal block at 0x000001B65BA65B80, 16 bytes long.
 Data: < &#167;&#166;[&#182;           > 90 A7 A6 5B B6 01 00 00 00 00 00 00 00 00 00 00 
{89} normal block at 0x000001B65BA6A790, 40 bytes long.
 Data: < [&#166;[&#182;   @&#192;&#166;[&#182;   > 80 5B A6 5B B6 01 00 00 40 C0 A6 5B B6 01 00 00 
{66} normal block at 0x000001B65BA66350, 16 bytes long.
 Data: <                > 80 EA 19 99 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001B65BA66300, 16 bytes long.
 Data: <@               > 40 E9 19 99 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001B65BA65900, 16 bytes long.
 Data: < W              > F8 57 16 99 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001B65BA65D60, 16 bytes long.
 Data: <&#216;W              > D8 57 16 99 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001B65BA65A90, 16 bytes long.
 Data: <P               > 50 04 16 99 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001B65BA658B0, 16 bytes long.
 Data: <0               > 30 04 16 99 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001B65BA65D10, 16 bytes long.
 Data: <                > E0 02 16 99 F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000001B65BA65CC0, 16 bytes long.
 Data: <                > 10 04 16 99 F6 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000001B65BA66080, 16 bytes long.
 Data: <p               > 70 04 16 99 F6 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000001B65BA65BD0, 16 bytes long.
 Data: < &#192;              > 18 C0 14 99 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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