Task 38646385

Name test_497-GPUGRID_TEST_ATM_1000_20261023-0-1-RND6134_0
Workunit 31591334
Created 23 Oct 2026, 16:34:35 UTC
Sent 23 Oct 2026, 17:17:51 UTC
Report deadline 28 Oct 2026, 17:17:51 UTC
Received 23 Oct 2026, 18:17:52 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 635377
Run time 59 min 1 sec
CPU time 57 min 41 sec
Validate state Valid
Credit 1,000.00
Device peak FLOPS 16,492.58 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 728.79 MB
Peak swap size 6.90 GB
Peak disk usage 2.97 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
19:19:29 (22872): wrapper (7.9.26016): starting
19:19:29 (22872): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
19:19:31 (22872): Library/usr/bin/tar.exe exited; CPU time 0.015625
19:19:32 (22872): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\7\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\7\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
20:17:11 (22872): C:/Windows/system32/cmd.exe exited; CPU time 3461.796875
20:17:11 (22872): called boinc_finish(0)
0 bytes in 0 Free Blocks.
656 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 56962429 bytes.
Dumping objects ->
{3835638} normal block at 0x000001E5CBBD04F0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835627} normal block at 0x000001E5CBBD05D0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835616} normal block at 0x000001E5CBBD0480, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835605} normal block at 0x000001E5CBBCFCA0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835594} normal block at 0x000001E5C9EF75B0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835563} normal block at 0x000001E5CBC1AFD0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835552} normal block at 0x000001E5C9EEB120, 200 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835549} normal block at 0x000001E5C9EEE2E0, 8 bytes long.
 Data: <  6&#202;&#229;   > 00 00 36 CA E5 01 00 00 
{3834745} normal block at 0x000001E5C9EEC330, 200 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833967} normal block at 0x000001E5C9EEDB60, 8 bytes long.
 Data: <0&#220;&#237;&#201;&#229;   > 30 DC ED C9 E5 01 00 00 
..\zip\boinc_zip.cpp(122) : {315} normal block at 0x000001E5C9EF1740, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x000001E5C9EE6A90, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{299} normal block at 0x000001E5C9EF8050, 16 bytes long.
 Data: < &#145;&#239;&#201;&#229;           > 08 91 EF C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000001E5C9EF8640, 16 bytes long.
 Data: <&#224; &#239;&#201;&#229;           > E0 90 EF C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001E5C9EF02D0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{296} normal block at 0x000001E5C9EF8AF0, 16 bytes long.
 Data: <&#184; &#239;&#201;&#229;           > B8 90 EF C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001E5C9EF87D0, 16 bytes long.
 Data: <  &#239;&#201;&#229;           > 90 90 EF C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001E5C9EF7E20, 16 bytes long.
 Data: <h &#239;&#201;&#229;           > 68 90 EF C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001E5C9EF8780, 16 bytes long.
 Data: <@ &#239;&#201;&#229;           > 40 90 EF C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001E5C9EF77E0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{291} normal block at 0x000001E5C9EF8C80, 16 bytes long.
 Data: <H&#150;&#238;&#201;&#229;           > 48 96 EE C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001E5C9EEFCD0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{289} normal block at 0x000001E5C9EF81E0, 16 bytes long.
 Data: < &#150;&#238;&#201;&#229;           > 20 96 EE C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001E5C9EF8A00, 16 bytes long.
 Data: <&#248;&#149;&#238;&#201;&#229;           > F8 95 EE C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001E5C9EF85F0, 16 bytes long.
 Data: <&#208;&#149;&#238;&#201;&#229;           > D0 95 EE C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001E5C9EF85A0, 16 bytes long.
 Data: <&#168;&#149;&#238;&#201;&#229;           > A8 95 EE C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001E5C9EF89B0, 16 bytes long.
 Data: < &#149;&#238;&#201;&#229;           > 80 95 EE C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001E5C9EF8550, 16 bytes long.
 Data: <X&#149;&#238;&#201;&#229;           > 58 95 EE C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001E5C9EF0450, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{281} normal block at 0x000001E5C9EF80A0, 16 bytes long.
 Data: <0&#149;&#238;&#201;&#229;           > 30 95 EE C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001E5C9EE9530, 320 bytes long.
 Data: <&#160; &#239;&#201;&#229;   P &#239;&#201;&#229;   > A0 80 EF C9 E5 01 00 00 50 04 EF C9 E5 01 00 00 
{279} normal block at 0x000001E5C9EF8410, 16 bytes long.
 Data: <  &#239;&#201;&#229;           > 20 90 EF C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001E5C9EF82D0, 16 bytes long.
 Data: <&#248;&#143;&#239;&#201;&#229;           > F8 8F EF C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001E5C9EEF910, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{276} normal block at 0x000001E5C9EF8D20, 16 bytes long.
 Data: <&#208;&#143;&#239;&#201;&#229;           > D0 8F EF C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001E5C9EEFDF0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{274} normal block at 0x000001E5C9EF8AA0, 16 bytes long.
 Data: < &#143;&#239;&#201;&#229;           > 18 8F EF C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001E5C9EF8960, 16 bytes long.
 Data: <&#240;&#142;&#239;&#201;&#229;           > F0 8E EF C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001E5C9EF8500, 16 bytes long.
 Data: <&#200;&#142;&#239;&#201;&#229;           > C8 8E EF C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001E5C9EF83C0, 16 bytes long.
 Data: <&#160;&#142;&#239;&#201;&#229;           > A0 8E EF C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001E5C9EF8730, 16 bytes long.
 Data: <x&#142;&#239;&#201;&#229;           > 78 8E EF C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001E5C9EF8910, 16 bytes long.
 Data: <P&#142;&#239;&#201;&#229;           > 50 8E EF C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001E5C9EF8BE0, 16 bytes long.
 Data: <&#192;x&#239;&#201;&#229;           > C0 78 EF C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001E5C9EF78C0, 40 bytes long.
 Data: <&#224;&#139;&#239;&#201;&#229;   &#208;&#175;&#193;&#203;&#229;   > E0 8B EF C9 E5 01 00 00 D0 AF C1 CB E5 01 00 00 
{265} normal block at 0x000001E5C9EF8870, 16 bytes long.
 Data: <0&#142;&#239;&#201;&#229;           > 30 8E EF C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001E5C9EF8370, 16 bytes long.
 Data: < &#142;&#239;&#201;&#229;           > 08 8E EF C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001E5C9EEFC10, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{262} normal block at 0x000001E5C9EF84B0, 16 bytes long.
 Data: <&#224;&#141;&#239;&#201;&#229;           > E0 8D EF C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001E5C9EF8DE0, 992 bytes long.
 Data: <&#176;&#132;&#239;&#201;&#229;    &#252;&#238;&#201;&#229;   > B0 84 EF C9 E5 01 00 00 10 FC EE C9 E5 01 00 00 
{97} normal block at 0x000001E5C9EF04B0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{96} normal block at 0x000001E5C9EEE6F0, 16 bytes long.
 Data: <Px&#239;&#201;&#229;           > 50 78 EF C9 E5 01 00 00 00 00 00 00 00 00 00 00 
{95} normal block at 0x000001E5C9EF7850, 40 bytes long.
 Data: <&#240;&#230;&#238;&#201;&#229;   &#176; &#239;&#201;&#229;   > F0 E6 EE C9 E5 01 00 00 B0 04 EF C9 E5 01 00 00 
{74} normal block at 0x000001E5C9EEDCF0, 16 bytes long.
 Data: < &#234;&#223;o&#247;           > 80 EA DF 6F F7 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x000001E5C9EEE560, 16 bytes long.
 Data: <@&#233;&#223;o&#247;           > 40 E9 DF 6F F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x000001E5C9EEDA70, 16 bytes long.
 Data: <&#248;W&#220;o&#247;           > F8 57 DC 6F F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000001E5C9EEDF70, 16 bytes long.
 Data: <&#216;W&#220;o&#247;           > D8 57 DC 6F F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001E5C9EEDC50, 16 bytes long.
 Data: <P &#220;o&#247;           > 50 04 DC 6F F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001E5C9EEDC00, 16 bytes long.
 Data: <0 &#220;o&#247;           > 30 04 DC 6F F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001E5C9EEE0B0, 16 bytes long.
 Data: <&#224; &#220;o&#247;           > E0 02 DC 6F F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001E5C9EED7F0, 16 bytes long.
 Data: <  &#220;o&#247;           > 10 04 DC 6F F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001E5C9EEDE30, 16 bytes long.
 Data: <p &#220;o&#247;           > 70 04 DC 6F F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001E5C9EED8E0, 16 bytes long.
 Data: < &#192;&#218;o&#247;           > 18 C0 DA 6F F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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