Task 38645151

Name tnks2_A23_A13_r0_4-QUICO_ATM_OpenFF23_NAGL_tnks2-3-6-RND7725_0
Workunit 31590196
Created 13 May 2026, 12:18:07 UTC
Sent 13 May 2026, 12:18:13 UTC
Report deadline 18 May 2026, 12:18:13 UTC
Received 13 May 2026, 16:26:49 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 628466
Run time 3 hours 39 min 54 sec
CPU time 2 hours 58 min 2 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 49,327.96 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 532.00 MB
Peak swap size 6.73 GB
Peak disk usage 2.95 GB

Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
05:47:06 (1008): wrapper (7.9.26016): starting
05:47:06 (1008): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A23_A13_0.pdb
QB_A23_A13_0.xml
QB_A23_A13.inpcrd
QB_A23_A13_input.yaml
QB_A23_A13.pdb
QB_A23_A13.prmtop
QB_A23_A13_sys.xml
run.bat
run.sh
05:47:08 (1008): Library/usr/bin/tar.exe exited; CPU time 0.000000
05:47:08 (1008): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
09:26:09 (1008): C:/Windows/system32/cmd.exe exited; CPU time 10682.609375
09:26:09 (1008): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
2288 bytes in 2 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 158353169 bytes.
Dumping objects ->
{3835637} normal block at 0x0000019F99F2CAC0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835626} normal block at 0x0000019F982A48D0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835615} normal block at 0x0000019F982A4860, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835604} normal block at 0x0000019F982A4780, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835593} normal block at 0x0000019F982A4E10, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835562} normal block at 0x0000019F99F779F0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835551} normal block at 0x0000019F99F8F000, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835548} normal block at 0x0000019F9829A250, 8 bytes long.
 Data: <  	&#154;&#159;   > 00 00 09 9A 9F 01 00 00 
{3834722} normal block at 0x0000019F99F8EF50, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833961} normal block at 0x0000019F9829AA70, 8 bytes long.
 Data: <&#160;# &#154;&#159;   > A0 23 00 9A 9F 01 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x0000019F982A0C20, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x0000019F98296750, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x0000019F982A5DB0, 16 bytes long.
 Data: <(h* &#159;           > 28 68 2A 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000019F982A59F0, 16 bytes long.
 Data: < h* &#159;           > 00 68 2A 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000019F982A0750, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x0000019F982A5540, 16 bytes long.
 Data: <&#216;g* &#159;           > D8 67 2A 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000019F982A6490, 16 bytes long.
 Data: <&#176;g* &#159;           > B0 67 2A 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000019F982A5AE0, 16 bytes long.
 Data: < g* &#159;           > 88 67 2A 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000019F982A6440, 16 bytes long.
 Data: <`g* &#159;           > 60 67 2A 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000019F982A47F0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x0000019F982A5CC0, 16 bytes long.
 Data: <&#184; ) &#159;           > B8 90 29 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000019F9829FFD0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x0000019F982A5EF0, 16 bytes long.
 Data: <  ) &#159;           > 90 90 29 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000019F982A63F0, 16 bytes long.
 Data: <h ) &#159;           > 68 90 29 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000019F982A5E50, 16 bytes long.
 Data: <@ ) &#159;           > 40 90 29 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000019F982A5770, 16 bytes long.
 Data: <  ) &#159;           > 18 90 29 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000019F982A5950, 16 bytes long.
 Data: <&#240; ) &#159;           > F0 8F 29 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000019F982A5F90, 16 bytes long.
 Data: <&#200; ) &#159;           > C8 8F 29 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000019F982A04B0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x0000019F982A63A0, 16 bytes long.
 Data: <&#160; ) &#159;           > A0 8F 29 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000019F98298FA0, 320 bytes long.
 Data: <&#160;c* &#159;   &#176; * &#159;   > A0 63 2A 98 9F 01 00 00 B0 04 2A 98 9F 01 00 00 
{276} normal block at 0x0000019F982A6350, 16 bytes long.
 Data: <@g* &#159;           > 40 67 2A 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000019F982A5900, 16 bytes long.
 Data: < g* &#159;           > 18 67 2A 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000019F9829FA90, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x0000019F982A5C20, 16 bytes long.
 Data: <&#240;f* &#159;           > F0 66 2A 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000019F982A0030, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x0000019F982A5720, 16 bytes long.
 Data: <8f* &#159;           > 38 66 2A 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000019F982A5EA0, 16 bytes long.
 Data: < f* &#159;           > 10 66 2A 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000019F982A56D0, 16 bytes long.
 Data: <&#232;e* &#159;           > E8 65 2A 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000019F982A5A90, 16 bytes long.
 Data: <&#192;e* &#159;           > C0 65 2A 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000019F982A5680, 16 bytes long.
 Data: < e* &#159;           > 98 65 2A 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000019F982A62B0, 16 bytes long.
 Data: <pe* &#159;           > 70 65 2A 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000019F982A58B0, 16 bytes long.
 Data: <&#192;L* &#159;           > C0 4C 2A 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000019F982A4CC0, 40 bytes long.
 Data: <&#176;X* &#159;   &#240;y&#247; &#159;   > B0 58 2A 98 9F 01 00 00 F0 79 F7 99 9F 01 00 00 
{262} normal block at 0x0000019F982A5D60, 16 bytes long.
 Data: <Pe* &#159;           > 50 65 2A 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000019F982A5860, 16 bytes long.
 Data: <(e* &#159;           > 28 65 2A 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000019F9829FB50, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x0000019F982A61C0, 16 bytes long.
 Data: < e* &#159;           > 00 65 2A 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000019F982A6500, 992 bytes long.
 Data: <&#192;a* &#159;   P&#251;) &#159;   > C0 61 2A 98 9F 01 00 00 50 FB 29 98 9F 01 00 00 
{94} normal block at 0x0000019F982A0390, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x0000019F9829A7F0, 16 bytes long.
 Data: <&#176;&#210;( &#159;           > B0 D2 28 98 9F 01 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x0000019F9828D2B0, 40 bytes long.
 Data: <&#240;&#167;) &#159;     * &#159;   > F0 A7 29 98 9F 01 00 00 90 03 2A 98 9F 01 00 00 
{71} normal block at 0x0000019F9829A5C0, 16 bytes long.
 Data: < &#234;&#133;&#130;&#247;           > 80 EA 85 82 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000019F9829B0B0, 16 bytes long.
 Data: <@&#233;&#133;&#130;&#247;           > 40 E9 85 82 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000019F9829B150, 16 bytes long.
 Data: <&#248;W&#130;&#130;&#247;           > F8 57 82 82 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000019F9829B010, 16 bytes long.
 Data: <&#216;W&#130;&#130;&#247;           > D8 57 82 82 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000019F9829A750, 16 bytes long.
 Data: <P &#130;&#130;&#247;           > 50 04 82 82 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000019F9829B100, 16 bytes long.
 Data: <0 &#130;&#130;&#247;           > 30 04 82 82 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000019F9829A390, 16 bytes long.
 Data: <&#224; &#130;&#130;&#247;           > E0 02 82 82 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000019F9829A9D0, 16 bytes long.
 Data: <  &#130;&#130;&#247;           > 10 04 82 82 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000019F9829A980, 16 bytes long.
 Data: <p &#130;&#130;&#247;           > 70 04 82 82 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000019F9829ABB0, 16 bytes long.
 Data: < &#192; &#130;&#247;           > 18 C0 80 82 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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