Task 38644030

Name cdk8_A26_A01_r0_4-QUICO_ATM_OpenFF23_NAGL_cdk8-4-6-RND0674_0
Workunit 31589918
Created 8 May 2026, 1:41:21 UTC
Sent 8 May 2026, 1:41:25 UTC
Report deadline 13 May 2026, 1:41:25 UTC
Received 8 May 2026, 7:57:56 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 629402
Run time 6 hours 15 min 17 sec
CPU time 5 hours 13 min 41 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 15,624.36 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 995.47 MB
Peak swap size 13.35 GB
Peak disk usage 3.67 GB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
20:42:22 (105532): wrapper (7.9.26016): starting
20:42:22 (105532): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A26_A01_0.pdb
QB_A26_A01_0.xml
QB_A26_A01.inpcrd
QB_A26_A01_input.yaml
QB_A26_A01.pdb
QB_A26_A01.prmtop
QB_A26_A01_sys.xml
run.bat
run.sh
20:42:24 (105532): Library/usr/bin/tar.exe exited; CPU time 0.015625
20:42:24 (105532): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\32\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\32\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
02:56:53 (105532): C:/Windows/system32/cmd.exe exited; CPU time 18821.656250
02:56:53 (105532): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 366632287 bytes.
Dumping objects ->
{3835313} normal block at 0x000002519D4BC490, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835302} normal block at 0x000002519D4BC8F0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835291} normal block at 0x000002519D4BC420, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835280} normal block at 0x000002519B754AB0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835269} normal block at 0x000002519B754A40, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835238} normal block at 0x000002519D504EA0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835227} normal block at 0x000002519D51ECB0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835224} normal block at 0x000002519B751230, 8 bytes long.
 Data: <  l&#155;Q   > 00 00 6C 9B 51 02 00 00 
{3834577} normal block at 0x000002519D51EEC0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833963} normal block at 0x000002519B7510F0, 8 bytes long.
 Data: <p7V Q   > 70 37 56 9D 51 02 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x000002519B7471D0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000002519B73FF20, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{297} normal block at 0x000002519B755810, 16 bytes long.
 Data: <hdu&#155;Q           > 68 64 75 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000002519B755270, 16 bytes long.
 Data: <@du&#155;Q           > 40 64 75 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000002519B74F6A0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{294} normal block at 0x000002519B7557C0, 16 bytes long.
 Data: < du&#155;Q           > 18 64 75 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000002519B7555E0, 16 bytes long.
 Data: <&#240;cu&#155;Q           > F0 63 75 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000002519B7554F0, 16 bytes long.
 Data: <&#200;cu&#155;Q           > C8 63 75 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000002519B756030, 16 bytes long.
 Data: <&#160;cu&#155;Q           > A0 63 75 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000002519B7548F0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{289} normal block at 0x000002519B755C70, 16 bytes long.
 Data: <&#168; t&#155;Q           > A8 08 74 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000002519B74FB20, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{287} normal block at 0x000002519B755450, 16 bytes long.
 Data: <  t&#155;Q           > 80 08 74 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000002519B755400, 16 bytes long.
 Data: <X t&#155;Q           > 58 08 74 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002519B7553B0, 16 bytes long.
 Data: <0 t&#155;Q           > 30 08 74 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002519B755770, 16 bytes long.
 Data: <  t&#155;Q           > 08 08 74 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002519B755360, 16 bytes long.
 Data: <&#224; t&#155;Q           > E0 07 74 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002519B7551D0, 16 bytes long.
 Data: <&#184; t&#155;Q           > B8 07 74 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000002519B74F8E0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{279} normal block at 0x000002519B755590, 16 bytes long.
 Data: <  t&#155;Q           > 90 07 74 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000002519B740790, 320 bytes long.
 Data: < Uu&#155;Q   &#224;&#248;t&#155;Q   > 90 55 75 9B 51 02 00 00 E0 F8 74 9B 51 02 00 00 
{277} normal block at 0x000002519B755F40, 16 bytes long.
 Data: < cu&#155;Q           > 80 63 75 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000002519B755540, 16 bytes long.
 Data: <Xcu&#155;Q           > 58 63 75 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002519B74F880, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{274} normal block at 0x000002519B755720, 16 bytes long.
 Data: <0cu&#155;Q           > 30 63 75 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002519B74F940, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{272} normal block at 0x000002519B755310, 16 bytes long.
 Data: <xbu&#155;Q           > 78 62 75 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002519B755950, 16 bytes long.
 Data: <Pbu&#155;Q           > 50 62 75 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000002519B755C20, 16 bytes long.
 Data: <(bu&#155;Q           > 28 62 75 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002519B755BD0, 16 bytes long.
 Data: < bu&#155;Q           > 00 62 75 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000002519B755EF0, 16 bytes long.
 Data: <&#216;au&#155;Q           > D8 61 75 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002519B755680, 16 bytes long.
 Data: <&#176;au&#155;Q           > B0 61 75 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000002519B755DB0, 16 bytes long.
 Data: < Hu&#155;Q           > 80 48 75 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002519B754880, 40 bytes long.
 Data: <&#176;]u&#155;Q   &#160;NP Q   > B0 5D 75 9B 51 02 00 00 A0 4E 50 9D 51 02 00 00 
{263} normal block at 0x000002519B7556D0, 16 bytes long.
 Data: < au&#155;Q           > 90 61 75 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000002519B7554A0, 16 bytes long.
 Data: <hau&#155;Q           > 68 61 75 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002519B74FCA0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{260} normal block at 0x000002519B755180, 16 bytes long.
 Data: <@au&#155;Q           > 40 61 75 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000002519B756140, 992 bytes long.
 Data: < Qu&#155;Q   &#160;&#252;t&#155;Q   > 80 51 75 9B 51 02 00 00 A0 FC 74 9B 51 02 00 00 
{95} normal block at 0x000002519B7504E0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{94} normal block at 0x000002519B750650, 16 bytes long.
 Data: < Ku&#155;Q           > 20 4B 75 9B 51 02 00 00 00 00 00 00 00 00 00 00 
{93} normal block at 0x000002519B754B20, 40 bytes long.
 Data: <P u&#155;Q   &#224; u&#155;Q   > 50 06 75 9B 51 02 00 00 E0 04 75 9B 51 02 00 00 
{72} normal block at 0x000002519B750A60, 16 bytes long.
 Data: < &#234; &#195;&#246;           > 80 EA 01 C3 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000002519B750EC0, 16 bytes long.
 Data: <@&#233; &#195;&#246;           > 40 E9 01 C3 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000002519B750920, 16 bytes long.
 Data: <&#248;W&#254;&#194;&#246;           > F8 57 FE C2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000002519B750790, 16 bytes long.
 Data: <&#216;W&#254;&#194;&#246;           > D8 57 FE C2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000002519B7515A0, 16 bytes long.
 Data: <P &#254;&#194;&#246;           > 50 04 FE C2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000002519B751050, 16 bytes long.
 Data: <0 &#254;&#194;&#246;           > 30 04 FE C2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000002519B750F10, 16 bytes long.
 Data: <&#224; &#254;&#194;&#246;           > E0 02 FE C2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000002519B751410, 16 bytes long.
 Data: <  &#254;&#194;&#246;           > 10 04 FE C2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000002519B750880, 16 bytes long.
 Data: <p &#254;&#194;&#246;           > 70 04 FE C2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000002519B751140, 16 bytes long.
 Data: < &#192;&#252;&#194;&#246;           > 18 C0 FC C2 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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