Task 38642850

Name BACE_A06_A36_r0_3-QUICO_ATM_OpenFF23_NAGL_BACE-5-6-RND5476_0
Workunit 31589489
Created 7 May 2026, 4:26:47 UTC
Sent 7 May 2026, 4:26:52 UTC
Report deadline 12 May 2026, 4:26:52 UTC
Received 8 May 2026, 13:38:19 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 606123
Run time 7 hours 41 min 42 sec
CPU time 7 hours 41 min 42 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 29,773.00 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 596.27 MB
Peak swap size 9.85 GB
Peak disk usage 4.49 GB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
23:47:50 (21024): wrapper (7.9.26016): starting
23:47:50 (21024): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A06_A36_0.pdb
QB_A06_A36_0.xml
QB_A06_A36.inpcrd
QB_A06_A36_input.yaml
QB_A06_A36.pdb
QB_A06_A36.prmtop
QB_A06_A36_sys.xml
run.bat
run.sh
23:47:51 (21024): Library/usr/bin/tar.exe exited; CPU time 0.031250
23:47:51 (21024): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\26\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\26\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3835236} normal block at 0x000002A557E968F0, 8 bytes long.
 Data: <   W    > 00 00 E6 57 A5 02 00 00 
..\lib\diagnostics_win.cpp(417) : {3833952} normal block at 0x000002A559C270C0, 1080 bytes long.
 Data: < R              > FC 52 00 00 CD CD CD CD 10 01 00 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {308} normal block at 0x000002A557E9EB70, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
Object dump complete.
01:56:05 (9388): wrapper (7.9.26016): starting
01:56:05 (9388): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
&#143;&#174;&#164;&#175;&#160;&#175;&#170;&#160; &#168;&#171;&#168; &#228;&#160;&#169;&#171; C:\ProgramData\BOINC\slots\26\tmp &#227;&#166;&#165; &#225;&#227;&#233;&#165;&#225;&#226;&#162;&#227;&#165;&#226;.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3849919} normal block at 0x0000017C6C575AA0, 8 bytes long.
 Data: <   m|   > 00 00 E0 6D 7C 01 00 00 
..\lib\diagnostics_win.cpp(417) : {3848635} normal block at 0x0000017C6E18EFA0, 1080 bytes long.
 Data: <8(      H       > 38 28 00 00 CD CD CD CD 48 01 00 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {308} normal block at 0x0000017C6C57E3E0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
Object dump complete.
06:04:46 (5256): wrapper (7.9.26016): starting
06:04:46 (5256): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
&#143;&#174;&#164;&#175;&#160;&#175;&#170;&#160; &#168;&#171;&#168; &#228;&#160;&#169;&#171; C:\ProgramData\BOINC\slots\26\tmp &#227;&#166;&#165; &#225;&#227;&#233;&#165;&#225;&#226;&#162;&#227;&#165;&#226;.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3849919} normal block at 0x00000200F9897570, 8 bytes long.
 Data: <        > 00 00 81 F9 00 02 00 00 
..\lib\diagnostics_win.cpp(417) : {3848635} normal block at 0x00000200F98F6540, 1080 bytes long.
 Data: <|b      l       > 7C 62 00 00 CD CD CD CD 6C 01 00 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {308} normal block at 0x00000200F989F7E0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
Object dump complete.
10:08:10 (23124): wrapper (7.9.26016): starting
10:08:10 (23124): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
&#143;&#174;&#164;&#175;&#160;&#175;&#170;&#160; &#168;&#171;&#168; &#228;&#160;&#169;&#171; C:\ProgramData\BOINC\slots\26\tmp &#227;&#166;&#165; &#225;&#227;&#233;&#165;&#225;&#226;&#162;&#227;&#165;&#226;.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
13:26:54 (8188): wrapper (7.9.26016): starting
13:26:54 (8188): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
&#143;&#174;&#164;&#175;&#160;&#175;&#170;&#160; &#168;&#171;&#168; &#228;&#160;&#169;&#171; C:\ProgramData\BOINC\slots\26\tmp &#227;&#166;&#165; &#225;&#227;&#233;&#165;&#225;&#226;&#162;&#227;&#165;&#226;.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3849919} normal block at 0x000002A00CCE6800, 8 bytes long.
 Data: <        > 00 00 C4 0C A0 02 00 00 
..\lib\diagnostics_win.cpp(417) : {3848635} normal block at 0x000002A00E8DB200, 1080 bytes long.
 Data: < >      X       > BC 3E 00 00 CD CD CD CD 58 01 00 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {308} normal block at 0x000002A00CCEFB50, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
Object dump complete.
15:26:55 (15756): wrapper (7.9.26016): starting
15:26:55 (15756): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
&#143;&#174;&#164;&#175;&#160;&#175;&#170;&#160; &#168;&#171;&#168; &#228;&#160;&#169;&#171; C:\ProgramData\BOINC\slots\26\tmp &#227;&#166;&#165; &#225;&#227;&#233;&#165;&#225;&#226;&#162;&#227;&#165;&#226;.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3849919} normal block at 0x000001E7A9855850, 8 bytes long.
 Data: <  z     > 00 00 7A A9 E7 01 00 00 
..\lib\diagnostics_win.cpp(417) : {3848635} normal block at 0x000001E7AB4B6B50, 1080 bytes long.
 Data: <T>      <       > 54 3E 00 00 CD CD CD CD 3C 01 00 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {308} normal block at 0x000001E7A985E3B0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
Object dump complete.
16:35:18 (16088): wrapper (7.9.26016): starting
16:35:18 (16088): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
&#143;&#174;&#164;&#175;&#160;&#175;&#170;&#160; &#168;&#171;&#168; &#228;&#160;&#169;&#171; C:\ProgramData\BOINC\slots\26\tmp &#227;&#166;&#165; &#225;&#227;&#233;&#165;&#225;&#226;&#162;&#227;&#165;&#226;.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
16:37:05 (16088): C:/Windows/system32/cmd.exe exited; CPU time 79.671875
16:37:05 (16088): called boinc_finish(0)
0 bytes in 0 Free Blocks.
616 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 1218993 bytes.
Dumping objects ->
{3850008} normal block at 0x00000153C6743810, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3849997} normal block at 0x00000153C6743B90, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3849986} normal block at 0x00000153C6744060, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3849975} normal block at 0x00000153C6743500, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3849964} normal block at 0x00000153C6743880, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3849933} normal block at 0x00000153C83A9230, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3849922} normal block at 0x00000153C8492720, 180 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3849919} normal block at 0x00000153C6715F50, 8 bytes long.
 Data: <  f&#198;S   > 00 00 66 C6 53 01 00 00 
{3849269} normal block at 0x00000153C8492EA0, 180 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3848636} normal block at 0x00000153C6715EB0, 8 bytes long.
 Data: <0&#146;@&#200;S   > 30 92 40 C8 53 01 00 00 
..\zip\boinc_zip.cpp(122) : {308} normal block at 0x00000153C671ED30, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x00000153C6705820, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{292} normal block at 0x00000153C6720B30, 16 bytes long.
 Data: <X r&#198;S           > 58 12 72 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000153C671FE10, 16 bytes long.
 Data: <0 r&#198;S           > 30 12 72 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000153C671ACA0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{289} normal block at 0x00000153C67206D0, 16 bytes long.
 Data: <  r&#198;S           > 08 12 72 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000153C6720AE0, 16 bytes long.
 Data: <&#224; r&#198;S           > E0 11 72 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x00000153C6720680, 16 bytes long.
 Data: <&#184; r&#198;S           > B8 11 72 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000153C6720A90, 16 bytes long.
 Data: <&#144; r&#198;S           > 90 11 72 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000153C6718C70, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{284} normal block at 0x00000153C6720360, 16 bytes long.
 Data: <  q&#198;S           > 88 98 71 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000153C671A6A0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{282} normal block at 0x00000153C67204A0, 16 bytes long.
 Data: <` q&#198;S           > 60 98 71 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000153C6720270, 16 bytes long.
 Data: <8 q&#198;S           > 38 98 71 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000153C6720860, 16 bytes long.
 Data: <  q&#198;S           > 10 98 71 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000153C6720090, 16 bytes long.
 Data: <&#232;&#151;q&#198;S           > E8 97 71 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000153C67201D0, 16 bytes long.
 Data: <&#192;&#151;q&#198;S           > C0 97 71 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000153C6720630, 16 bytes long.
 Data: < &#151;q&#198;S           > 98 97 71 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000153C671AE20, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{274} normal block at 0x00000153C6720770, 16 bytes long.
 Data: <p&#151;q&#198;S           > 70 97 71 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000153C6719770, 320 bytes long.
 Data: <p r&#198;S    &#174;q&#198;S   > 70 07 72 C6 53 01 00 00 20 AE 71 C6 53 01 00 00 
{272} normal block at 0x00000153C6720040, 16 bytes long.
 Data: <p r&#198;S           > 70 11 72 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000153C6720590, 16 bytes long.
 Data: <H r&#198;S           > 48 11 72 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000153C671AAC0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{269} normal block at 0x00000153C6720540, 16 bytes long.
 Data: <  r&#198;S           > 20 11 72 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000153C671A640, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{267} normal block at 0x00000153C6720810, 16 bytes long.
 Data: <h r&#198;S           > 68 10 72 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000153C6720310, 16 bytes long.
 Data: <@ r&#198;S           > 40 10 72 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000153C67205E0, 16 bytes long.
 Data: <  r&#198;S           > 18 10 72 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000153C671FF50, 16 bytes long.
 Data: <&#240; r&#198;S           > F0 0F 72 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000153C67209F0, 16 bytes long.
 Data: <&#200; r&#198;S           > C8 0F 72 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000153C671FDC0, 16 bytes long.
 Data: <&#160; r&#198;S           > A0 0F 72 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x00000153C6720D10, 16 bytes long.
 Data: <&#144;&#139;q&#198;S           > 90 8B 71 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x00000153C6718B90, 40 bytes long.
 Data: <  r&#198;S   0&#146;:&#200;S   > 10 0D 72 C6 53 01 00 00 30 92 3A C8 53 01 00 00 
{258} normal block at 0x00000153C671FE60, 16 bytes long.
 Data: <&#128; r&#198;S           > 80 0F 72 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x00000153C671FF00, 16 bytes long.
 Data: <X r&#198;S           > 58 0F 72 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x00000153C671A9A0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{255} normal block at 0x00000153C6720950, 16 bytes long.
 Data: <0 r&#198;S           > 30 0F 72 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x00000153C6720F30, 992 bytes long.
 Data: <P	r&#198;S   &#160;&#169;q&#198;S   > 50 09 72 C6 53 01 00 00 A0 A9 71 C6 53 01 00 00 
{90} normal block at 0x00000153C6719F20, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{89} normal block at 0x00000153C6716040, 16 bytes long.
 Data: <P&#134;q&#198;S           > 50 86 71 C6 53 01 00 00 00 00 00 00 00 00 00 00 
{88} normal block at 0x00000153C6718650, 40 bytes long.
 Data: <@`q&#198;S    &#159;q&#198;S   > 40 60 71 C6 53 01 00 00 20 9F 71 C6 53 01 00 00 
{67} normal block at 0x00000153C67160E0, 16 bytes long.
 Data: <&#128;&#234;E1&#246;           > 80 EA 45 31 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000153C67165E0, 16 bytes long.
 Data: <@&#233;E1&#246;           > 40 E9 45 31 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000153C6716310, 16 bytes long.
 Data: <&#248;WB1&#246;           > F8 57 42 31 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000153C6715E60, 16 bytes long.
 Data: <&#216;WB1&#246;           > D8 57 42 31 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000153C67161D0, 16 bytes long.
 Data: <P B1&#246;           > 50 04 42 31 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000153C6715DC0, 16 bytes long.
 Data: <0 B1&#246;           > 30 04 42 31 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x00000153C6716180, 16 bytes long.
 Data: <&#224; B1&#246;           > E0 02 42 31 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x00000153C67162C0, 16 bytes long.
 Data: <  B1&#246;           > 10 04 42 31 F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x00000153C6715AA0, 16 bytes long.
 Data: <p B1&#246;           > 70 04 42 31 F6 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x00000153C6715C80, 16 bytes long.
 Data: < &#192;@1&#246;           > 18 C0 40 31 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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