Task 38642840

Name p38_3_A11_A33_r0_2-QUICO_ATM_OpenFF_NAGL_p38_3-5-6-RND3348_0
Workunit 31589479
Created 7 May 2026, 4:12:32 UTC
Sent 7 May 2026, 4:12:39 UTC
Report deadline 12 May 2026, 4:12:39 UTC
Received 7 May 2026, 17:08:51 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 549134
Run time 7 hours 14 min 22 sec
CPU time 7 hours 8 min 32 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 53,152.72 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 674.94 MB
Peak swap size 6.94 GB
Peak disk usage 4.08 GB

Stderr output

<core_client_version>8.2.13</core_client_version>
<![CDATA[
<stderr_txt>
04:51:52 (22672): wrapper (7.9.26016): starting
04:51:52 (22672): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A11_A33_0.pdb
QB_A11_A33_0.xml
QB_A11_A33.inpcrd
QB_A11_A33_input.yaml
QB_A11_A33.pdb
QB_A11_A33.prmtop
QB_A11_A33_sys.xml
run.bat
run.sh
04:51:53 (22672): Library/usr/bin/tar.exe exited; CPU time 0.046875
04:51:53 (22672): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
12:06:32 (22672): C:/Windows/system32/cmd.exe exited; CPU time 25712.046875
12:06:32 (22672): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 504889621 bytes.
Dumping objects ->
{3835296} normal block at 0x0000022F996E0AE0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835285} normal block at 0x0000022F996E1090, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835274} normal block at 0x0000022F996E1020, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835263} normal block at 0x0000022F996E07D0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835252} normal block at 0x0000022F996E0A70, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835221} normal block at 0x0000022F99810400, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835210} normal block at 0x0000022F998274A0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835207} normal block at 0x0000022F97D0D500, 8 bytes long.
 Data: <  &#205;&#151;/   > 00 00 CD 97 2F 02 00 00 
{3834575} normal block at 0x0000022F99827080, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833955} normal block at 0x0000022F97D0D0F0, 8 bytes long.
 Data: <Pp&#207;&#151;/   > 50 70 CF 97 2F 02 00 00 
..\zip\boinc_zip.cpp(122) : {309} normal block at 0x0000022F97CF5A30, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000022F97D0E340, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{293} normal block at 0x0000022F97D0DB40, 16 bytes long.
 Data: <&#248;&#225;&#208;&#151;/           > F8 E1 D0 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000022F97D0D050, 16 bytes long.
 Data: <&#208;&#225;&#208;&#151;/           > D0 E1 D0 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000022F97D09950, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{290} normal block at 0x0000022F97D0D4B0, 16 bytes long.
 Data: <&#168;&#225;&#208;&#151;/           > A8 E1 D0 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000022F97D0D370, 16 bytes long.
 Data: < &#225;&#208;&#151;/           > 80 E1 D0 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000022F97D0DAF0, 16 bytes long.
 Data: <X&#225;&#208;&#151;/           > 58 E1 D0 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000022F97D0D550, 16 bytes long.
 Data: <0&#225;&#208;&#151;/           > 30 E1 D0 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000022F97D075E0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{285} normal block at 0x0000022F97D0D460, 16 bytes long.
 Data: <(Q&#207;&#151;/           > 28 51 CF 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000022F97D09E90, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{283} normal block at 0x0000022F97D0DA50, 16 bytes long.
 Data: < Q&#207;&#151;/           > 00 51 CF 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000022F97D0D730, 16 bytes long.
 Data: <&#216;P&#207;&#151;/           > D8 50 CF 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000022F97D0D960, 16 bytes long.
 Data: <&#176;P&#207;&#151;/           > B0 50 CF 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000022F97D0DAA0, 16 bytes long.
 Data: < P&#207;&#151;/           > 88 50 CF 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000022F97D0DBE0, 16 bytes long.
 Data: <`P&#207;&#151;/           > 60 50 CF 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000022F97D0D640, 16 bytes long.
 Data: <8P&#207;&#151;/           > 38 50 CF 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000022F97D098F0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{275} normal block at 0x0000022F97D0D690, 16 bytes long.
 Data: < P&#207;&#151;/           > 10 50 CF 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000022F97CF5010, 320 bytes long.
 Data: < &#214;&#208;&#151;/   &#240; &#208;&#151;/   > 90 D6 D0 97 2F 02 00 00 F0 98 D0 97 2F 02 00 00 
{273} normal block at 0x0000022F97D0D5F0, 16 bytes long.
 Data: < &#225;&#208;&#151;/           > 10 E1 D0 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000022F97D0D000, 16 bytes long.
 Data: <&#232;&#224;&#208;&#151;/           > E8 E0 D0 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000022F97D091D0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{270} normal block at 0x0000022F97D0DDC0, 16 bytes long.
 Data: <&#192;&#224;&#208;&#151;/           > C0 E0 D0 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000022F97D09530, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{268} normal block at 0x0000022F97D0DB90, 16 bytes long.
 Data: < &#224;&#208;&#151;/           > 08 E0 D0 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000022F97D0D1E0, 16 bytes long.
 Data: <&#224;&#223;&#208;&#151;/           > E0 DF D0 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000022F97D0D780, 16 bytes long.
 Data: <&#184;&#223;&#208;&#151;/           > B8 DF D0 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000022F97D0D280, 16 bytes long.
 Data: < &#223;&#208;&#151;/           > 90 DF D0 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000022F97D0D410, 16 bytes long.
 Data: <h&#223;&#208;&#151;/           > 68 DF D0 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000022F97D0CF60, 16 bytes long.
 Data: <@&#223;&#208;&#151;/           > 40 DF D0 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000022F97D0DD70, 16 bytes long.
 Data: <pu&#208;&#151;/           > 70 75 D0 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000022F97D07570, 40 bytes long.
 Data: <p&#221;&#208;&#151;/       /   > 70 DD D0 97 2F 02 00 00 00 04 81 99 2F 02 00 00 
{259} normal block at 0x0000022F97D0DA00, 16 bytes long.
 Data: < &#223;&#208;&#151;/           > 20 DF D0 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000022F97D0D9B0, 16 bytes long.
 Data: <&#248;&#222;&#208;&#151;/           > F8 DE D0 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x0000022F97D09AD0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{256} normal block at 0x0000022F97D0CF10, 16 bytes long.
 Data: <&#208;&#222;&#208;&#151;/           > D0 DE D0 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x0000022F97D0DED0, 992 bytes long.
 Data: < &#207;&#208;&#151;/   &#208;&#154;&#208;&#151;/   > 10 CF D0 97 2F 02 00 00 D0 9A D0 97 2F 02 00 00 
{91} normal block at 0x0000022F97D09710, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{90} normal block at 0x0000022F97D00270, 16 bytes long.
 Data: < t&#208;&#151;/           > 90 74 D0 97 2F 02 00 00 00 00 00 00 00 00 00 00 
{89} normal block at 0x0000022F97D07490, 40 bytes long.
 Data: <p &#208;&#151;/    &#151;&#208;&#151;/   > 70 02 D0 97 2F 02 00 00 10 97 D0 97 2F 02 00 00 
{68} normal block at 0x0000022F97D00220, 16 bytes long.
 Data: < &#234; &#226;&#246;           > 80 EA 1F E2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000022F97D001D0, 16 bytes long.
 Data: <@&#233; &#226;&#246;           > 40 E9 1F E2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000022F97CFFC80, 16 bytes long.
 Data: <&#248;W &#226;&#246;           > F8 57 1C E2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000022F97D00180, 16 bytes long.
 Data: <&#216;W &#226;&#246;           > D8 57 1C E2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000022F97CFFE60, 16 bytes long.
 Data: <P  &#226;&#246;           > 50 04 1C E2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000022F97CFFAA0, 16 bytes long.
 Data: <0  &#226;&#246;           > 30 04 1C E2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000022F97CFFA00, 16 bytes long.
 Data: <&#224;  &#226;&#246;           > E0 02 1C E2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000022F97D00540, 16 bytes long.
 Data: <   &#226;&#246;           > 10 04 1C E2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000022F97D004F0, 16 bytes long.
 Data: <p  &#226;&#246;           > 70 04 1C E2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x0000022F97D008B0, 16 bytes long.
 Data: < &#192; &#226;&#246;           > 18 C0 1A E2 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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