Task 38642056

Name p38_3_A27_A31_r0_5-QUICO_ATM_OpenFF_NAGL_p38_3-1-6-RND9032_2
Workunit 31584926
Created 4 May 2026, 13:22:36 UTC
Sent 4 May 2026, 13:22:46 UTC
Report deadline 9 May 2026, 13:22:46 UTC
Received 6 May 2026, 16:28:51 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 648712
Run time 8 hours 23 min 1 sec
CPU time 8 hours 9 min 7 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 6,713.83 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 608.34 MB
Peak swap size 6.71 GB
Peak disk usage 3.06 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
21:24:57 (20812): wrapper (7.9.26016): starting
21:24:57 (20812): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A27_A31_0.pdb
QB_A27_A31_0.xml
QB_A27_A31.inpcrd
QB_A27_A31_input.yaml
QB_A27_A31.pdb
QB_A27_A31.prmtop
QB_A27_A31_sys.xml
run.bat
run.sh
21:25:00 (20812): Library/usr/bin/tar.exe exited; CPU time 0.000000
21:25:00 (20812): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\16\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\16\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
05:46:47 (20812): C:/Windows/system32/cmd.exe exited; CPU time 29347.390625
05:46:47 (20812): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 472080901 bytes.
Dumping objects ->
{3835259} normal block at 0x000001ED2E761410, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835248} normal block at 0x000001ED2E7613A0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835237} normal block at 0x000001ED2E761480, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835226} normal block at 0x000001ED2E761090, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835215} normal block at 0x000001ED2E761330, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835184} normal block at 0x000001ED2E8731A0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835171} normal block at 0x000001ED2B0F87D0, 8 bytes long.
 Data: <   ,    > 00 00 C7 2C ED 01 00 00 
{3834029} normal block at 0x000001ED2B0F7FB0, 8 bytes long.
 Data: < p +    > 20 70 13 2B ED 01 00 00 
..\zip\boinc_zip.cpp(122) : {305} normal block at 0x000001ED2B0F66A0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001ED2B0F75E0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{289} normal block at 0x000001ED2B0F7C90, 16 bytes long.
 Data: < y +            > B8 79 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001ED2B0F8910, 16 bytes long.
 Data: < y +            > 90 79 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001ED2B0F1C00, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{286} normal block at 0x000001ED2B0F80A0, 16 bytes long.
 Data: <hy +            > 68 79 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001ED2B0F7BF0, 16 bytes long.
 Data: <@y +            > 40 79 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001ED2B0F8370, 16 bytes long.
 Data: < y +            > 18 79 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001ED2B0F7B00, 16 bytes long.
 Data: < x +            > F0 78 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001ED2B0F0B00, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{281} normal block at 0x000001ED2B0F37C0, 16 bytes long.
 Data: <xu +            > 78 75 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001ED2B0F1E40, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{279} normal block at 0x000001ED2B0F3770, 16 bytes long.
 Data: <Pu +            > 50 75 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001ED2B0F36D0, 16 bytes long.
 Data: <(u +            > 28 75 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001ED2B0F4490, 16 bytes long.
 Data: < u +            > 00 75 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001ED2B0F4440, 16 bytes long.
 Data: < t +            > D8 74 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001ED2B0F4170, 16 bytes long.
 Data: < t +            > B0 74 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001ED2B0F4120, 16 bytes long.
 Data: < t +            > 88 74 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001ED2B0F1AE0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{271} normal block at 0x000001ED2B0F43A0, 16 bytes long.
 Data: <`t +            > 60 74 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001ED2B0F7460, 320 bytes long.
 Data: < C +       +    > A0 43 0F 2B ED 01 00 00 E0 1A 0F 2B ED 01 00 00 
{269} normal block at 0x000001ED2B0F3B80, 16 bytes long.
 Data: < x +            > D0 78 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001ED2B0F3630, 16 bytes long.
 Data: < x +            > A8 78 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001ED2B0F16C0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{266} normal block at 0x000001ED2B0F3F90, 16 bytes long.
 Data: < x +            > 80 78 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001ED2B0F1A20, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{264} normal block at 0x000001ED2B0F4350, 16 bytes long.
 Data: < w +            > C8 77 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001ED2B0F40D0, 16 bytes long.
 Data: < w +            > A0 77 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001ED2B0F4080, 16 bytes long.
 Data: <xw +            > 78 77 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001ED2B0F3C20, 16 bytes long.
 Data: <Pw +            > 50 77 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001ED2B0F4210, 16 bytes long.
 Data: <(w +            > 28 77 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001ED2B0F3BD0, 16 bytes long.
 Data: < w +            > 00 77 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x000001ED2B0F3F40, 16 bytes long.
 Data: <   +            > A0 06 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000001ED2B0F06A0, 40 bytes long.
 Data: <@? +     1 .    > 40 3F 0F 2B ED 01 00 00 A0 31 87 2E ED 01 00 00 
{255} normal block at 0x000001ED2B0F3DB0, 16 bytes long.
 Data: < v +            > E0 76 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x000001ED2B0F3A90, 16 bytes long.
 Data: < v +            > B8 76 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x000001ED2B0F2320, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{252} normal block at 0x000001ED2B0F4300, 16 bytes long.
 Data: < v +            > 90 76 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{251} normal block at 0x000001ED2B0F7690, 992 bytes long.
 Data: < C +     # +    > 00 43 0F 2B ED 01 00 00 20 23 0F 2B ED 01 00 00 
{87} normal block at 0x000001ED2B0F1D20, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{86} normal block at 0x000001ED2B0F3A40, 16 bytes long.
 Data: <P  +            > 50 05 0F 2B ED 01 00 00 00 00 00 00 00 00 00 00 
{85} normal block at 0x000001ED2B0F0550, 40 bytes long.
 Data: <@: +       +    > 40 3A 0F 2B ED 01 00 00 20 1D 0F 2B ED 01 00 00 
{62} normal block at 0x000001ED2B0F3D60, 16 bytes long.
 Data: <                > 80 EA F9 CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001ED2B0F43F0, 16 bytes long.
 Data: <@               > 40 E9 F9 CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001ED2B0F35E0, 16 bytes long.
 Data: < W              > F8 57 F6 CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000001ED2B0F38B0, 16 bytes long.
 Data: < W              > D8 57 F6 CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000001ED2B0F3900, 16 bytes long.
 Data: <P               > 50 04 F6 CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000001ED2B0F39A0, 16 bytes long.
 Data: <0               > 30 04 F6 CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x000001ED2B0F3720, 16 bytes long.
 Data: <                > E0 02 F6 CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x000001ED2B0F3680, 16 bytes long.
 Data: <                > 10 04 F6 CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{54} normal block at 0x000001ED2B0F42B0, 16 bytes long.
 Data: <p               > 70 04 F6 CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{53} normal block at 0x000001ED2B0E5BC0, 16 bytes long.
 Data: <                > 18 C0 F4 CA F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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