Task 38642030

Name p38_3_A23_A08_r0_4-QUICO_ATM_OpenFF_NAGL_p38_3-5-6-RND2216_1
Workunit 31588832
Created 4 May 2026, 5:59:55 UTC
Sent 4 May 2026, 6:00:02 UTC
Report deadline 9 May 2026, 6:00:02 UTC
Received 7 May 2026, 3:40:38 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 622119
Run time 5 hours 7 min 18 sec
CPU time 4 hours 51 min 4 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 21,381.78 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 696.51 MB
Peak swap size 8.39 GB
Peak disk usage 3.93 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
14:08:12 (15736): wrapper (7.9.26016): starting
14:08:12 (15736): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A23_A08_0.pdb
QB_A23_A08_0.xml
QB_A23_A08.inpcrd
QB_A23_A08_input.yaml
QB_A23_A08.pdb
QB_A23_A08.prmtop
QB_A23_A08_sys.xml
run.bat
run.sh
14:08:13 (15736): Library/usr/bin/tar.exe exited; CPU time 0.000000
14:08:13 (15736): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
19:14:07 (15736): C:/Windows/system32/cmd.exe exited; CPU time 17464.062500
19:14:07 (15736): called boinc_finish(0)
0 bytes in 0 Free Blocks.
428 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 298766524 bytes.
Dumping objects ->
{3835277} normal block at 0x00000244DA7B8040, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835266} normal block at 0x00000244D89451D0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835255} normal block at 0x00000244D89450F0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835244} normal block at 0x00000244D8945080, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835233} normal block at 0x00000244D8944EC0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835202} normal block at 0x00000244DA76A370, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835191} normal block at 0x00000244DA77C9D0, 86 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835188} normal block at 0x00000244D893DF80, 8 bytes long.
 Data: <   &#217;D   > 00 00 00 D9 44 02 00 00 
{3834565} normal block at 0x00000244DA77C250, 86 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833961} normal block at 0x00000244D893D620, 8 bytes long.
 Data: < G&#148;&#216;D   > 20 47 94 D8 44 02 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x00000244D8941F20, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x00000244D892F340, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x00000244D8946470, 16 bytes long.
 Data: <&#168;m&#148;&#216;D           > A8 6D 94 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x00000244D8946420, 16 bytes long.
 Data: < m&#148;&#216;D           > 80 6D 94 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x00000244D893F970, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x00000244D8945CF0, 16 bytes long.
 Data: <Xm&#148;&#216;D           > 58 6D 94 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000244D8946510, 16 bytes long.
 Data: <0m&#148;&#216;D           > 30 6D 94 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000244D8945D90, 16 bytes long.
 Data: < m&#148;&#216;D           > 08 6D 94 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000244D8945C50, 16 bytes long.
 Data: <&#224;l&#148;&#216;D           > E0 6C 94 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000244D8945160, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x00000244D8945AC0, 16 bytes long.
 Data: <8&#147;&#147;&#216;D           > 38 93 93 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x00000244D893FAF0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x00000244D89468D0, 16 bytes long.
 Data: < &#147;&#147;&#216;D           > 10 93 93 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000244D89463D0, 16 bytes long.
 Data: <&#232;&#146;&#147;&#216;D           > E8 92 93 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000244D8946560, 16 bytes long.
 Data: <&#192;&#146;&#147;&#216;D           > C0 92 93 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000244D8946650, 16 bytes long.
 Data: < &#146;&#147;&#216;D           > 98 92 93 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000244D8945CA0, 16 bytes long.
 Data: <p&#146;&#147;&#216;D           > 70 92 93 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000244D8946330, 16 bytes long.
 Data: <H&#146;&#147;&#216;D           > 48 92 93 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000244D89402D0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x00000244D8946A10, 16 bytes long.
 Data: < &#146;&#147;&#216;D           > 20 92 93 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000244D8939220, 320 bytes long.
 Data: < j&#148;&#216;D   &#208; &#148;&#216;D   > 10 6A 94 D8 44 02 00 00 D0 02 94 D8 44 02 00 00 
{276} normal block at 0x00000244D8945B10, 16 bytes long.
 Data: <&#192;l&#148;&#216;D           > C0 6C 94 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000244D8946790, 16 bytes long.
 Data: < l&#148;&#216;D           > 98 6C 94 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000244D893FEB0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x00000244D89469C0, 16 bytes long.
 Data: <pl&#148;&#216;D           > 70 6C 94 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000244D8940390, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x00000244D8946740, 16 bytes long.
 Data: <&#184;k&#148;&#216;D           > B8 6B 94 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000244D8945BB0, 16 bytes long.
 Data: < k&#148;&#216;D           > 90 6B 94 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000244D8946830, 16 bytes long.
 Data: <hk&#148;&#216;D           > 68 6B 94 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000244D8945B60, 16 bytes long.
 Data: <@k&#148;&#216;D           > 40 6B 94 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000244D8946880, 16 bytes long.
 Data: < k&#148;&#216;D           > 18 6B 94 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000244D8946380, 16 bytes long.
 Data: <&#240;j&#148;&#216;D           > F0 6A 94 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000244D8946970, 16 bytes long.
 Data: < S&#148;&#216;D           > 90 53 94 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000244D8945390, 40 bytes long.
 Data: <pi&#148;&#216;D   p&#163;v&#218;D   > 70 69 94 D8 44 02 00 00 70 A3 76 DA 44 02 00 00 
{262} normal block at 0x00000244D8946150, 16 bytes long.
 Data: <&#208;j&#148;&#216;D           > D0 6A 94 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000244D8946920, 16 bytes long.
 Data: <&#168;j&#148;&#216;D           > A8 6A 94 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x00000244D893FC70, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x00000244D89466F0, 16 bytes long.
 Data: < j&#148;&#216;D           > 80 6A 94 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x00000244D8946A80, 992 bytes long.
 Data: <&#240;f&#148;&#216;D   p&#252;&#147;&#216;D   > F0 66 94 D8 44 02 00 00 70 FC 93 D8 44 02 00 00 
{94} normal block at 0x00000244D8940030, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x00000244D893E110, 16 bytes long.
 Data: <P&#241;&#147;&#216;D           > 50 F1 93 D8 44 02 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x00000244D893F150, 40 bytes long.
 Data: < &#225;&#147;&#216;D   0 &#148;&#216;D   > 10 E1 93 D8 44 02 00 00 30 00 94 D8 44 02 00 00 
{71} normal block at 0x00000244D893D8F0, 16 bytes long.
 Data: < &#234;%a&#247;           > 80 EA 25 61 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x00000244D893D6C0, 16 bytes long.
 Data: <@&#233;%a&#247;           > 40 E9 25 61 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x00000244D893E2F0, 16 bytes long.
 Data: <&#248;W"a&#247;           > F8 57 22 61 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000244D893D8A0, 16 bytes long.
 Data: <&#216;W"a&#247;           > D8 57 22 61 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000244D893E020, 16 bytes long.
 Data: <P "a&#247;           > 50 04 22 61 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000244D893D850, 16 bytes long.
 Data: <0 "a&#247;           > 30 04 22 61 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000244D893DEE0, 16 bytes long.
 Data: <&#224; "a&#247;           > E0 02 22 61 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000244D893DE40, 16 bytes long.
 Data: <  "a&#247;           > 10 04 22 61 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000244D893DAD0, 16 bytes long.
 Data: <p "a&#247;           > 70 04 22 61 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000244D893DA30, 16 bytes long.
 Data: < &#192; a&#247;           > 18 C0 20 61 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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