Task 38641515

Name p38_3_A04_A03_r0_5-QUICO_ATM_OpenFF_NAGL_p38_3-4-6-RND9484_0
Workunit 31588681
Created 2 May 2026, 19:43:52 UTC
Sent 2 May 2026, 19:43:56 UTC
Report deadline 7 May 2026, 19:43:56 UTC
Received 5 May 2026, 17:21:48 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 195 (0x000000C3) EXIT_CHILD_FAILED
Computer ID 613613
Run time 4 hours 57 min 26 sec
CPU time 4 hours 25 min 55 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 18,252.22 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 675.53 MB
Peak swap size 8.41 GB
Peak disk usage 4.13 GB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<message>
The operating system cannot run (null).
 (0xc3) - exit code 195 (0xc3)</message>
<stderr_txt>
15:03:40 (197832): wrapper (7.9.26016): starting
15:03:40 (197832): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A04_A03_0.pdb
QB_A04_A03_0.xml
QB_A04_A03.inpcrd
QB_A04_A03_input.yaml
QB_A04_A03.pdb
QB_A04_A03.prmtop
QB_A04_A03_sys.xml
run.bat
run.sh
15:03:45 (197832): Library/usr/bin/tar.exe exited; CPU time 0.140625
15:03:45 (197832): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Traceback (most recent call last):
  File "<frozen runpy>", line 198, in _run_module_as_main
  File "<frozen runpy>", line 88, in _run_code
  File "C:\ProgramData\BOINC\slots\1\Scripts\rbfe_production.exe\__main__.py", line 7, in <module>
  File "C:\ProgramData\BOINC\slots\1\Lib\site-packages\atom_openmm\rbfe_production.py", line 33, in rbfe_production
    rx.scheduleJobs()
  File "C:\ProgramData\BOINC\slots\1\Lib\site-packages\atom_openmm\async_re.py", line 321, in scheduleJobs
    self.transport.ProcessJobQueue(min_time,cycle_time)
  File "C:\ProgramData\BOINC\slots\1\Lib\site-packages\atom_openmm\local_openmm_transport.py", line 186, in ProcessJobQueue
    self.isDone(repl,0)
  File "C:\ProgramData\BOINC\slots\1\Lib\site-packages\atom_openmm\local_openmm_transport.py", line 287, in isDone
    retcode = self._update_replica(job)
              ^^^^^^^^^^^^^^^^^^^^^^^^^
  File "C:\ProgramData\BOINC\slots\1\Lib\site-packages\atom_openmm\local_openmm_transport.py", line 210, in _update_replica
    (pos,vel) = job['openmm_worker'].get_posvel()
                ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "C:\ProgramData\BOINC\slots\1\Lib\site-packages\atom_openmm\ommworker.py", line 467, in get_posvel
    state = self.context.getState(getPositions=True, getVelocities=True)
            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "C:\ProgramData\BOINC\slots\1\Lib\site-packages\openmm\openmm.py", line 5022, in getState
    state = _openmm.Context_getState(self, types, enforcePeriodicBox, groups_mask)
            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
openmm.OpenMMException: bad allocation
20:19:42 (197832): C:/Windows/system32/cmd.exe exited; CPU time 15955.796875
20:19:42 (197832): app exit status: 0x16
20:19:42 (197832): called boinc_finish(195)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 319258081 bytes.
Dumping objects ->
{3835547} normal block at 0x000001B27BBCD890, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835536} normal block at 0x000001B27BBCE310, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835525} normal block at 0x000001B279E85490, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835514} normal block at 0x000001B279E858F0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835503} normal block at 0x000001B279E85810, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835472} normal block at 0x000001B27BC178C0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835461} normal block at 0x000001B27BC2F6F0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835458} normal block at 0x000001B279E7DA80, 8 bytes long.
 Data: <  *z&#178;   > 00 00 2A 7A B2 01 00 00 
{3834691} normal block at 0x000001B27BC2F640, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833963} normal block at 0x000001B279E7DD00, 8 bytes long.
 Data: <&#128;Y&#202;{&#178;   > 80 59 CA 7B B2 01 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x000001B279E81E60, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000001B279E766A0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{297} normal block at 0x000001B279E86250, 16 bytes long.
 Data: < s&#232;y&#178;           > 08 73 E8 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000001B279E862A0, 16 bytes long.
 Data: <&#224;r&#232;y&#178;           > E0 72 E8 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001B279E7F7D0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{294} normal block at 0x000001B279E86750, 16 bytes long.
 Data: <&#184;r&#232;y&#178;           > B8 72 E8 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001B279E86E30, 16 bytes long.
 Data: <&#144;r&#232;y&#178;           > 90 72 E8 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001B279E86660, 16 bytes long.
 Data: <hr&#232;y&#178;           > 68 72 E8 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001B279E867A0, 16 bytes long.
 Data: <@r&#232;y&#178;           > 40 72 E8 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001B279E852D0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{289} normal block at 0x000001B279E86C00, 16 bytes long.
 Data: <h&#248;&#230;y&#178;           > 68 F8 E6 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001B279E7FA10, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{287} normal block at 0x000001B279E86B60, 16 bytes long.
 Data: <@&#248;&#230;y&#178;           > 40 F8 E6 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001B279E86570, 16 bytes long.
 Data: < &#248;&#230;y&#178;           > 18 F8 E6 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001B279E86520, 16 bytes long.
 Data: <&#240;&#247;&#230;y&#178;           > F0 F7 E6 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001B279E867F0, 16 bytes long.
 Data: <&#200;&#247;&#230;y&#178;           > C8 F7 E6 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001B279E86610, 16 bytes long.
 Data: <&#160;&#247;&#230;y&#178;           > A0 F7 E6 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001B279E86160, 16 bytes long.
 Data: <x&#247;&#230;y&#178;           > 78 F7 E6 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001B279E7FCB0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{279} normal block at 0x000001B279E86430, 16 bytes long.
 Data: <P&#247;&#230;y&#178;           > 50 F7 E6 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001B279E6F750, 320 bytes long.
 Data: <0d&#232;y&#178;   &#176;&#252;&#231;y&#178;   > 30 64 E8 79 B2 01 00 00 B0 FC E7 79 B2 01 00 00 
{277} normal block at 0x000001B279E86390, 16 bytes long.
 Data: < r&#232;y&#178;           > 20 72 E8 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001B279E865C0, 16 bytes long.
 Data: <&#248;q&#232;y&#178;           > F8 71 E8 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001B279E80310, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{274} normal block at 0x000001B279E86200, 16 bytes long.
 Data: <&#208;q&#232;y&#178;           > D0 71 E8 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001B279E7FC50, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{272} normal block at 0x000001B279E86340, 16 bytes long.
 Data: < q&#232;y&#178;           > 18 71 E8 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001B279E864D0, 16 bytes long.
 Data: <&#240;p&#232;y&#178;           > F0 70 E8 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001B279E86890, 16 bytes long.
 Data: <&#200;p&#232;y&#178;           > C8 70 E8 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001B279E86110, 16 bytes long.
 Data: <&#160;p&#232;y&#178;           > A0 70 E8 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001B279E861B0, 16 bytes long.
 Data: <xp&#232;y&#178;           > 78 70 E8 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001B279E86A70, 16 bytes long.
 Data: <Pp&#232;y&#178;           > 50 70 E8 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001B279E86480, 16 bytes long.
 Data: <&#224;U&#232;y&#178;           > E0 55 E8 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001B279E855E0, 40 bytes long.
 Data: <&#128;d&#232;y&#178;   &#192;x&#193;{&#178;   > 80 64 E8 79 B2 01 00 00 C0 78 C1 7B B2 01 00 00 
{263} normal block at 0x000001B279E86ED0, 16 bytes long.
 Data: <0p&#232;y&#178;           > 30 70 E8 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001B279E862F0, 16 bytes long.
 Data: < p&#232;y&#178;           > 08 70 E8 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001B279E806D0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{260} normal block at 0x000001B279E863E0, 16 bytes long.
 Data: <&#224;o&#232;y&#178;           > E0 6F E8 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001B279E86FE0, 992 bytes long.
 Data: <&#224;c&#232;y&#178;   &#208; &#232;y&#178;   > E0 63 E8 79 B2 01 00 00 D0 06 E8 79 B2 01 00 00 
{95} normal block at 0x000001B279E7F9B0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{94} normal block at 0x000001B279E7D9E0, 16 bytes long.
 Data: < &#235;&#230;y&#178;           > 00 EB E6 79 B2 01 00 00 00 00 00 00 00 00 00 00 
{93} normal block at 0x000001B279E6EB00, 40 bytes long.
 Data: <&#224;&#217;&#231;y&#178;   &#176;&#249;&#231;y&#178;   > E0 D9 E7 79 B2 01 00 00 B0 F9 E7 79 B2 01 00 00 
{72} normal block at 0x000001B279E7E4D0, 16 bytes long.
 Data: <&#128;&#234;R &#247;           > 80 EA 52 01 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000001B279E7DEE0, 16 bytes long.
 Data: <@&#233;R &#247;           > 40 E9 52 01 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001B279E7DDA0, 16 bytes long.
 Data: <&#248;WO &#247;           > F8 57 4F 01 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001B279E7E7F0, 16 bytes long.
 Data: <&#216;WO &#247;           > D8 57 4F 01 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001B279E7E520, 16 bytes long.
 Data: <P O &#247;           > 50 04 4F 01 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001B279E7DDF0, 16 bytes long.
 Data: <0 O &#247;           > 30 04 4F 01 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001B279E7DC10, 16 bytes long.
 Data: <&#224; O &#247;           > E0 02 4F 01 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001B279E7E7A0, 16 bytes long.
 Data: <  O &#247;           > 10 04 4F 01 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001B279E7DB20, 16 bytes long.
 Data: <p O &#247;           > 70 04 4F 01 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001B279E7E250, 16 bytes long.
 Data: < &#192;M &#247;           > 18 C0 4D 01 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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