Task 38638946

Name tnks2_A25_A11_r0_3-QUICO_ATM_OpenFF23_NAGL_tnks2-3-6-RND1980_0
Workunit 31586622
Created 30 Apr 2026, 12:44:18 UTC
Sent 30 Apr 2026, 12:44:26 UTC
Report deadline 5 May 2026, 12:44:26 UTC
Received 7 May 2026, 4:31:49 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 629186
Run time 3 hours 31 min 6 sec
CPU time 2 hours 56 min 30 sec
Validate state Task was reported too late to validate
Credit 0.00
Device peak FLOPS 31,246.10 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 560.50 MB
Peak swap size 6.64 GB
Peak disk usage 2.95 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
05:46:09 (28100): wrapper (7.9.26016): starting
05:46:09 (28100): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A25_A11_0.pdb
QB_A25_A11_0.xml
QB_A25_A11.inpcrd
QB_A25_A11_input.yaml
QB_A25_A11.pdb
QB_A25_A11.prmtop
QB_A25_A11_sys.xml
run.bat
run.sh
05:46:10 (28100): Library/usr/bin/tar.exe exited; CPU time 0.000000
05:46:10 (28100): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\32\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\32\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
09:16:30 (28100): C:/Windows/system32/cmd.exe exited; CPU time 10590.109375
09:16:30 (28100): called boinc_finish(0)
0 bytes in 0 Free Blocks.
464 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 227805815 bytes.
Dumping objects ->
{3835575} normal block at 0x000001EF0D494CD0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835564} normal block at 0x000001EF0D494AA0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835553} normal block at 0x000001EF0D494A30, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835542} normal block at 0x000001EF0D4948E0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835531} normal block at 0x000001EF0D494950, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835500} normal block at 0x000001EF0F124E20, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835489} normal block at 0x000001EF0F13E520, 104 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835486} normal block at 0x000001EF0D48DEF0, 8 bytes long.
 Data: <  &#138; &#239;   > 00 00 8A 0D EF 01 00 00 
{3834698} normal block at 0x000001EF0F13EB50, 104 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833955} normal block at 0x000001EF0D48D090, 8 bytes long.
 Data: <P&#215;G &#239;   > 50 D7 47 0D EF 01 00 00 
..\zip\boinc_zip.cpp(122) : {309} normal block at 0x000001EF0D480DC0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001EF0D482650, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{293} normal block at 0x000001EF0D4959F0, 16 bytes long.
 Data: <&#216;gI &#239;           > D8 67 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001EF0D495E50, 16 bytes long.
 Data: <&#176;gI &#239;           > B0 67 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001EF0D491140, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{290} normal block at 0x000001EF0D495680, 16 bytes long.
 Data: < gI &#239;           > 88 67 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001EF0D495E00, 16 bytes long.
 Data: <`gI &#239;           > 60 67 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001EF0D495DB0, 16 bytes long.
 Data: <8gI &#239;           > 38 67 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001EF0D495590, 16 bytes long.
 Data: < gI &#239;           > 10 67 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001EF0D494DB0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{285} normal block at 0x000001EF0D495950, 16 bytes long.
 Data: < 	I &#239;           > 08 09 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001EF0D491440, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{283} normal block at 0x000001EF0D495630, 16 bytes long.
 Data: <&#224; I &#239;           > E0 08 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001EF0D495D60, 16 bytes long.
 Data: <&#184; I &#239;           > B8 08 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001EF0D495900, 16 bytes long.
 Data: <  I &#239;           > 90 08 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001EF0D496350, 16 bytes long.
 Data: <h I &#239;           > 68 08 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001EF0D495C20, 16 bytes long.
 Data: <@ I &#239;           > 40 08 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001EF0D496030, 16 bytes long.
 Data: <  I &#239;           > 18 08 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001EF0D490F00, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{275} normal block at 0x000001EF0D4958B0, 16 bytes long.
 Data: <&#240; I &#239;           > F0 07 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001EF0D4907F0, 320 bytes long.
 Data: <&#176;XI &#239;     I &#239;   > B0 58 49 0D EF 01 00 00 00 0F 49 0D EF 01 00 00 
{273} normal block at 0x000001EF0D4955E0, 16 bytes long.
 Data: <&#240;fI &#239;           > F0 66 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001EF0D496300, 16 bytes long.
 Data: <&#200;fI &#239;           > C8 66 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001EF0D490A80, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{270} normal block at 0x000001EF0D4959A0, 16 bytes long.
 Data: <&#160;fI &#239;           > A0 66 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001EF0D491740, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{268} normal block at 0x000001EF0D495860, 16 bytes long.
 Data: <&#232;eI &#239;           > E8 65 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001EF0D495CC0, 16 bytes long.
 Data: <&#192;eI &#239;           > C0 65 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001EF0D4956D0, 16 bytes long.
 Data: < eI &#239;           > 98 65 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001EF0D495BD0, 16 bytes long.
 Data: <peI &#239;           > 70 65 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001EF0D495810, 16 bytes long.
 Data: <HeI &#239;           > 48 65 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001EF0D495F90, 16 bytes long.
 Data: < eI &#239;           > 20 65 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001EF0D495F40, 16 bytes long.
 Data: <&#240;KI &#239;           > F0 4B 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001EF0D494BF0, 40 bytes long.
 Data: <@_I &#239;    N  &#239;   > 40 5F 49 0D EF 01 00 00 20 4E 12 0F EF 01 00 00 
{259} normal block at 0x000001EF0D495770, 16 bytes long.
 Data: < eI &#239;           > 00 65 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001EF0D4957C0, 16 bytes long.
 Data: <&#216;dI &#239;           > D8 64 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x000001EF0D491620, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{256} normal block at 0x000001EF0D495C70, 16 bytes long.
 Data: <&#176;dI &#239;           > B0 64 49 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000001EF0D4964B0, 992 bytes long.
 Data: <p\I &#239;     I &#239;   > 70 5C 49 0D EF 01 00 00 20 16 49 0D EF 01 00 00 
{91} normal block at 0x000001EF0D490A20, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{90} normal block at 0x000001EF0D48D720, 16 bytes long.
 Data: < &#238;G &#239;           > 90 EE 47 0D EF 01 00 00 00 00 00 00 00 00 00 00 
{89} normal block at 0x000001EF0D47EE90, 40 bytes long.
 Data: < &#215;H &#239;     I &#239;   > 20 D7 48 0D EF 01 00 00 20 0A 49 0D EF 01 00 00 
{68} normal block at 0x000001EF0D48DEA0, 16 bytes long.
 Data: < &#234;&#155;&#177;&#246;           > 80 EA 9B B1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001EF0D48DFE0, 16 bytes long.
 Data: <@&#233;&#155;&#177;&#246;           > 40 E9 9B B1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001EF0D48D4A0, 16 bytes long.
 Data: <&#248;W &#177;&#246;           > F8 57 98 B1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001EF0D48DE50, 16 bytes long.
 Data: <&#216;W &#177;&#246;           > D8 57 98 B1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001EF0D48D360, 16 bytes long.
 Data: <P  &#177;&#246;           > 50 04 98 B1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001EF0D48D540, 16 bytes long.
 Data: <0  &#177;&#246;           > 30 04 98 B1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001EF0D48D590, 16 bytes long.
 Data: <&#224;  &#177;&#246;           > E0 02 98 B1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001EF0D48D8B0, 16 bytes long.
 Data: <   &#177;&#246;           > 10 04 98 B1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001EF0D48DF90, 16 bytes long.
 Data: <p  &#177;&#246;           > 70 04 98 B1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000001EF0D48DE00, 16 bytes long.
 Data: < &#192;&#150;&#177;&#246;           > 18 C0 96 B1 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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