Task 38631899

Name hif2a_A28_A22_r0_4-QUICO_ATM_GAFF2_NAGL_hif2a-5-6-RND9872_0
Workunit 31580909
Created 26 Apr 2026, 4:48:08 UTC
Sent 26 Apr 2026, 4:48:22 UTC
Report deadline 1 May 2026, 4:48:22 UTC
Received 26 Apr 2026, 12:45:42 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 156955
Run time 3 hours 53 min 24 sec
CPU time 3 hours 40 min 48 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 22,244.47 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 465.80 MB
Peak swap size 8.11 GB
Peak disk usage 2.90 GB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
10:53:12 (13928): wrapper (7.9.26016): starting
10:53:12 (13928): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A28_A22_0.pdb
QB_A28_A22_0.xml
QB_A28_A22.inpcrd
QB_A28_A22_input.yaml
QB_A28_A22.pdb
QB_A28_A22.prmtop
QB_A28_A22_sys.xml
run.bat
run.sh
10:53:13 (13928): Library/usr/bin/tar.exe exited; CPU time 0.015625
10:53:13 (13928): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'D:\Boinc_data\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'D:\Boinc_data\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
14:44:59 (13928): C:/Windows/system32/cmd.exe exited; CPU time 13248.312500
14:44:59 (13928): called boinc_finish(0)
0 bytes in 0 Free Blocks.
380 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 293772431 bytes.
Dumping objects ->
{3835307} normal block at 0x0000022836486D40, 48 bytes long.
 Data: <PATH=D:\Boinc_da> 50 41 54 48 3D 44 3A 5C 42 6F 69 6E 63 5F 64 61 
{3835296} normal block at 0x0000022838025F50, 32 bytes long.
 Data: <HOME=D:\Boinc_da> 48 4F 4D 45 3D 44 3A 5C 42 6F 69 6E 63 5F 64 61 
{3835285} normal block at 0x0000022838025C50, 32 bytes long.
 Data: <TMP=D:\Boinc_dat> 54 4D 50 3D 44 3A 5C 42 6F 69 6E 63 5F 64 61 74 
{3835274} normal block at 0x0000022838025590, 32 bytes long.
 Data: <TEMP=D:\Boinc_da> 54 45 4D 50 3D 44 3A 5C 42 6F 69 6E 63 5F 64 61 
{3835263} normal block at 0x0000022838026250, 32 bytes long.
 Data: <TMPDIR=D:\Boinc_> 54 4D 50 44 49 52 3D 44 3A 5C 42 6F 69 6E 63 5F 
{3835232} normal block at 0x0000022836486F70, 48 bytes long.
 Data: <PATH=D:\Boinc_da> 50 41 54 48 3D 44 3A 5C 42 6F 69 6E 63 5F 64 61 
{3835221} normal block at 0x0000022837FEDAB0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835218} normal block at 0x0000022836456C40, 8 bytes long.
 Data: <  &#220;7(   > 00 00 DC 37 28 02 00 00 
{3834570} normal block at 0x0000022837FEDED0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833957} normal block at 0x0000022836457460, 8 bytes long.
 Data: <&#176;&#228;&#238;7(   > B0 E4 EE 37 28 02 00 00 
..\zip\boinc_zip.cpp(122) : {310} normal block at 0x0000022836461AB0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000002283645D690, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{294} normal block at 0x0000022836462E10, 16 bytes long.
 Data: <&#216;AF6(           > D8 41 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000022836463900, 16 bytes long.
 Data: <&#176;AF6(           > B0 41 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000002283645BBB0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{291} normal block at 0x0000022836463310, 16 bytes long.
 Data: < AF6(           > 88 41 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000022836462DC0, 16 bytes long.
 Data: <`AF6(           > 60 41 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000228364632C0, 16 bytes long.
 Data: <8AF6(           > 38 41 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000022836462D70, 16 bytes long.
 Data: < AF6(           > 10 41 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000002283645DEA0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{286} normal block at 0x0000022836463270, 16 bytes long.
 Data: < )F6(           > 88 29 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000002283645C2D0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{284} normal block at 0x0000022836463810, 16 bytes long.
 Data: <`)F6(           > 60 29 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000022836463180, 16 bytes long.
 Data: <8)F6(           > 38 29 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000022836463130, 16 bytes long.
 Data: < )F6(           > 10 29 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000228364637C0, 16 bytes long.
 Data: <&#232;(F6(           > E8 28 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000022836463770, 16 bytes long.
 Data: <&#192;(F6(           > C0 28 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000022836462FA0, 16 bytes long.
 Data: < (F6(           > 98 28 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000002283645C690, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{276} normal block at 0x0000022836463680, 16 bytes long.
 Data: <p(F6(           > 70 28 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000022836462870, 320 bytes long.
 Data: < 6F6(    &#198;E6(   > 80 36 46 36 28 02 00 00 90 C6 45 36 28 02 00 00 
{274} normal block at 0x0000022836462EB0, 16 bytes long.
 Data: <&#240;@F6(           > F0 40 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000022836463090, 16 bytes long.
 Data: <&#200;@F6(           > C8 40 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002283645C5D0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{271} normal block at 0x0000022836462D20, 16 bytes long.
 Data: <&#160;@F6(           > A0 40 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000002283645BC70, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{269} normal block at 0x0000022836462C80, 16 bytes long.
 Data: <&#232;?F6(           > E8 3F 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000022836463720, 16 bytes long.
 Data: <&#192;?F6(           > C0 3F 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000228364630E0, 16 bytes long.
 Data: < ?F6(           > 98 3F 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000022836463630, 16 bytes long.
 Data: <p?F6(           > 70 3F 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000228364634A0, 16 bytes long.
 Data: <H?F6(           > 48 3F 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000022836462E60, 16 bytes long.
 Data: < ?F6(           > 20 3F 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000022836463450, 16 bytes long.
 Data: <&#240;&#223;E6(           > F0 DF 45 36 28 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002283645DFF0, 40 bytes long.
 Data: <P4F6(   poH6(   > 50 34 46 36 28 02 00 00 70 6F 48 36 28 02 00 00 
{260} normal block at 0x00000228364635E0, 16 bytes long.
 Data: < ?F6(           > 00 3F 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000022836462B90, 16 bytes long.
 Data: <&#216;>F6(           > D8 3E 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000002283645C4B0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{257} normal block at 0x0000022836462AF0, 16 bytes long.
 Data: <&#176;>F6(           > B0 3E 46 36 28 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x0000022836463EB0, 992 bytes long.
 Data: <&#240;*F6(   &#176;&#196;E6(   > F0 2A 46 36 28 02 00 00 B0 C4 45 36 28 02 00 00 
{92} normal block at 0x000002283645BD90, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{91} normal block at 0x0000022836456CE0, 16 bytes long.
 Data: <`&#224;E6(           > 60 E0 45 36 28 02 00 00 00 00 00 00 00 00 00 00 
{90} normal block at 0x000002283645E060, 40 bytes long.
 Data: <&#224;lE6(     E6(   > E0 6C 45 36 28 02 00 00 90 BD 45 36 28 02 00 00 
{69} normal block at 0x0000022836457280, 16 bytes long.
 Data: < &#234;&#229;h&#246;           > 80 EA E5 68 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000228364572D0, 16 bytes long.
 Data: <@&#233;&#229;h&#246;           > 40 E9 E5 68 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000022836456F60, 16 bytes long.
 Data: <&#248;W&#226;h&#246;           > F8 57 E2 68 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000022836457230, 16 bytes long.
 Data: <&#216;W&#226;h&#246;           > D8 57 E2 68 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000022836457960, 16 bytes long.
 Data: <P &#226;h&#246;           > 50 04 E2 68 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000022836457AA0, 16 bytes long.
 Data: <0 &#226;h&#246;           > 30 04 E2 68 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000022836456EC0, 16 bytes long.
 Data: <&#224; &#226;h&#246;           > E0 02 E2 68 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000022836457500, 16 bytes long.
 Data: <  &#226;h&#246;           > 10 04 E2 68 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x00000228364571E0, 16 bytes long.
 Data: <p &#226;h&#246;           > 70 04 E2 68 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x00000228364579B0, 16 bytes long.
 Data: < &#192;&#224;h&#246;           > 18 C0 E0 68 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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