Task 38630372

Name MCL1_RE_A10_A33_r0_5-QUICO_ATM_GAFF2_NAGL_MCL1_RE-1-6-RND4512_1
Workunit 31578576
Created 25 Apr 2026, 12:39:41 UTC
Sent 25 Apr 2026, 12:39:52 UTC
Report deadline 30 Apr 2026, 12:39:52 UTC
Received 26 Apr 2026, 3:50:31 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 637164
Run time 2 hours 50 min 55 sec
CPU time 2 hours 50 min 55 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 29,359.10 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 577.42 MB
Peak swap size 24.80 GB
Peak disk usage 2.92 GB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
20:06:43 (158904): wrapper (7.9.26016): starting
20:06:43 (158904): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A10_A33_0.pdb
QB_A10_A33_0.xml
QB_A10_A33.inpcrd
QB_A10_A33_input.yaml
QB_A10_A33.pdb
QB_A10_A33.prmtop
QB_A10_A33_sys.xml
run.bat
run.sh
20:06:44 (158904): Library/usr/bin/tar.exe exited; CPU time 0.015625
20:06:44 (158904): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
22:49:56 (158904): C:/Windows/system32/cmd.exe exited; CPU time 10255.671875
22:49:56 (158904): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 254269671 bytes.
Dumping objects ->
{3835319} normal block at 0x0000027B0B6273F0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835308} normal block at 0x0000027B0B627A10, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835297} normal block at 0x0000027B0B627700, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835286} normal block at 0x0000027B0B627380, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835275} normal block at 0x0000027B0B6277E0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835244} normal block at 0x0000027B0B6638C0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835233} normal block at 0x0000027B0B5EE5C0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835230} normal block at 0x0000027B095BDA20, 8 bytes long.
 Data: <  &#210;	{   > 00 00 D2 09 7B 02 00 00 
{3834578} normal block at 0x0000027B0B5EEA90, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833961} normal block at 0x0000027B095BDFC0, 8 bytes long.
 Data: <&#160;Hf {   > A0 48 66 0B 7B 02 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x0000027B095B09D0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x0000027B095B1A80, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x0000027B095C6640, 16 bytes long.
 Data: <  \	{           > 98 07 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000027B095C6050, 16 bytes long.
 Data: <p \	{           > 70 07 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000027B095C0B50, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x0000027B095C6960, 16 bytes long.
 Data: <H \	{           > 48 07 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000027B095C6910, 16 bytes long.
 Data: <  \	{           > 20 07 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000027B095C5DD0, 16 bytes long.
 Data: <&#248; \	{           > F8 06 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000027B095C5F10, 16 bytes long.
 Data: <&#208; \	{           > D0 06 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000027B095C44F0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x0000027B095C63C0, 16 bytes long.
 Data: <&#168;	\	{           > A8 09 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000027B095C1090, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x0000027B095C6550, 16 bytes long.
 Data: < 	\	{           > 80 09 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000027B095C5F60, 16 bytes long.
 Data: <X	\	{           > 58 09 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000027B095C6820, 16 bytes long.
 Data: <0	\	{           > 30 09 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000027B095C6780, 16 bytes long.
 Data: < 	\	{           > 08 09 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000027B095C6370, 16 bytes long.
 Data: <&#224; \	{           > E0 08 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000027B095C5D80, 16 bytes long.
 Data: <&#184; \	{           > B8 08 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000027B095C1390, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x0000027B095C6230, 16 bytes long.
 Data: <  \	{           > 90 08 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000027B095C0890, 320 bytes long.
 Data: <0b\	{     \	{   > 30 62 5C 09 7B 02 00 00 90 13 5C 09 7B 02 00 00 
{276} normal block at 0x0000027B095C6190, 16 bytes long.
 Data: <&#176; \	{           > B0 06 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000027B095C6320, 16 bytes long.
 Data: <  \	{           > 88 06 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000027B095C12D0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x0000027B095C6C30, 16 bytes long.
 Data: <` \	{           > 60 06 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000027B095C1690, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x0000027B095C6BE0, 16 bytes long.
 Data: <&#168; \	{           > A8 05 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000027B095C5D30, 16 bytes long.
 Data: <  \	{           > 80 05 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000027B095C5CE0, 16 bytes long.
 Data: <X \	{           > 58 05 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000027B095C65F0, 16 bytes long.
 Data: <0 \	{           > 30 05 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000027B095C6B90, 16 bytes long.
 Data: <  \	{           > 08 05 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000027B095C6410, 16 bytes long.
 Data: <&#224; \	{           > E0 04 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000027B095C6AA0, 16 bytes long.
 Data: <@F\	{           > 40 46 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000027B095C4640, 40 bytes long.
 Data: <&#160;j\	{   &#192;8f {   > A0 6A 5C 09 7B 02 00 00 C0 38 66 0B 7B 02 00 00 
{262} normal block at 0x0000027B095C65A0, 16 bytes long.
 Data: <&#192; \	{           > C0 04 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000027B095C6B40, 16 bytes long.
 Data: <  \	{           > 98 04 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000027B095C17B0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x0000027B095C62D0, 16 bytes long.
 Data: <p \	{           > 70 04 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000027B095C0470, 992 bytes long.
 Data: <&#208;b\	{   &#176; \	{   > D0 62 5C 09 7B 02 00 00 B0 17 5C 09 7B 02 00 00 
{94} normal block at 0x0000027B095C1270, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x0000027B095BD2F0, 16 bytes long.
 Data: <PB\	{           > 50 42 5C 09 7B 02 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x0000027B095C4250, 40 bytes long.
 Data: <&#240;&#210;[	{   p \	{   > F0 D2 5B 09 7B 02 00 00 70 12 5C 09 7B 02 00 00 
{71} normal block at 0x0000027B095BD700, 16 bytes long.
 Data: < &#234;kg&#246;           > 80 EA 6B 67 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000027B095BD750, 16 bytes long.
 Data: <@&#233;kg&#246;           > 40 E9 6B 67 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000027B095BDF70, 16 bytes long.
 Data: <&#248;Whg&#246;           > F8 57 68 67 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000027B095BD520, 16 bytes long.
 Data: <&#216;Whg&#246;           > D8 57 68 67 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000027B095BD4D0, 16 bytes long.
 Data: <P hg&#246;           > 50 04 68 67 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000027B095BD430, 16 bytes long.
 Data: <0 hg&#246;           > 30 04 68 67 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000027B095BD340, 16 bytes long.
 Data: <&#224; hg&#246;           > E0 02 68 67 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000027B095BDF20, 16 bytes long.
 Data: <  hg&#246;           > 10 04 68 67 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000027B095BD1B0, 16 bytes long.
 Data: <p hg&#246;           > 70 04 68 67 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000027B095BDDE0, 16 bytes long.
 Data: < &#192;fg&#246;           > 18 C0 66 67 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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