Task 38629259

Name PTP1B_A01_A23_r0_1-QUICO_ATM_OpenFF23_NAGL_PTP1B-3-6-RND7793_2
Workunit 31578629
Created 25 Apr 2026, 2:29:26 UTC
Sent 25 Apr 2026, 2:29:33 UTC
Report deadline 30 Apr 2026, 2:29:33 UTC
Received 25 Apr 2026, 5:20:48 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 636627
Run time 2 hours 32 min 6 sec
CPU time 2 hours 29 min 49 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 53,462.40 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 604.99 MB
Peak swap size 6.85 GB
Peak disk usage 3.00 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
22:46:52 (8120): wrapper (7.9.26016): starting
22:46:52 (8120): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A01_A23_0.pdb
QB_A01_A23_0.xml
QB_A01_A23.inpcrd
QB_A01_A23_input.yaml
QB_A01_A23.pdb
QB_A01_A23.prmtop
QB_A01_A23_sys.xml
run.bat
run.sh
22:46:53 (8120): Library/usr/bin/tar.exe exited; CPU time 0.000000
22:46:53 (8120): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
01:18:11 (8120): C:/Windows/system32/cmd.exe exited; CPU time 8989.156250
01:18:11 (8120): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 157810431 bytes.
Dumping objects ->
{3835578} normal block at 0x000001BDF69DD230, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835567} normal block at 0x000001BDF69DC740, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835556} normal block at 0x000001BDF4E04D90, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835545} normal block at 0x000001BDF4E04C40, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835534} normal block at 0x000001BDF4E04BD0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835503} normal block at 0x000001BDF6A24E10, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835490} normal block at 0x000001BDF4DFD8A0, 8 bytes long.
 Data: <  &#218;&#244;&#189;   > 00 00 DA F4 BD 01 00 00 
{3833951} normal block at 0x000001BDF4DFDD50, 8 bytes long.
 Data: <&#192;@&#224;&#244;&#189;   > C0 40 E0 F4 BD 01 00 00 
..\zip\boinc_zip.cpp(122) : {307} normal block at 0x000001BDF4DF0C00, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001BDF4DF1E30, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{291} normal block at 0x000001BDF4E05D30, 16 bytes long.
 Data: <hf&#224;&#244;&#189;           > 68 66 E0 F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001BDF4E05AB0, 16 bytes long.
 Data: <@f&#224;&#244;&#189;           > 40 66 E0 F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001BDF4E01510, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{288} normal block at 0x000001BDF4E06230, 16 bytes long.
 Data: < f&#224;&#244;&#189;           > 18 66 E0 F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001BDF4E05BF0, 16 bytes long.
 Data: <&#240;e&#224;&#244;&#189;           > F0 65 E0 F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001BDF4E05510, 16 bytes long.
 Data: <&#200;e&#224;&#244;&#189;           > C8 65 E0 F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001BDF4E061E0, 16 bytes long.
 Data: <&#160;e&#224;&#244;&#189;           > A0 65 E0 F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001BDF4E04E00, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{283} normal block at 0x000001BDF4E053D0, 16 bytes long.
 Data: < 	&#223;&#244;&#189;           > 88 09 DF F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001BDF4E01150, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{281} normal block at 0x000001BDF4E05A60, 16 bytes long.
 Data: <`	&#223;&#244;&#189;           > 60 09 DF F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001BDF4E05EC0, 16 bytes long.
 Data: <8	&#223;&#244;&#189;           > 38 09 DF F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001BDF4E05A10, 16 bytes long.
 Data: < 	&#223;&#244;&#189;           > 10 09 DF F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001BDF4E06190, 16 bytes long.
 Data: <&#232; &#223;&#244;&#189;           > E8 08 DF F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001BDF4E05C90, 16 bytes long.
 Data: <&#192; &#223;&#244;&#189;           > C0 08 DF F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001BDF4E05380, 16 bytes long.
 Data: <  &#223;&#244;&#189;           > 98 08 DF F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001BDF4E00EB0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{273} normal block at 0x000001BDF4E06000, 16 bytes long.
 Data: <p &#223;&#244;&#189;           > 70 08 DF F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001BDF4DF0870, 320 bytes long.
 Data: < `&#224;&#244;&#189;   &#176; &#224;&#244;&#189;   > 00 60 E0 F4 BD 01 00 00 B0 0E E0 F4 BD 01 00 00 
{271} normal block at 0x000001BDF4E06280, 16 bytes long.
 Data: < e&#224;&#244;&#189;           > 80 65 E0 F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001BDF4E060A0, 16 bytes long.
 Data: <Xe&#224;&#244;&#189;           > 58 65 E0 F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001BDF4E01390, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{268} normal block at 0x000001BDF4E05FB0, 16 bytes long.
 Data: <0e&#224;&#244;&#189;           > 30 65 E0 F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001BDF4E01090, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{266} normal block at 0x000001BDF4E06140, 16 bytes long.
 Data: <xd&#224;&#244;&#189;           > 78 64 E0 F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001BDF4E05B50, 16 bytes long.
 Data: <Pd&#224;&#244;&#189;           > 50 64 E0 F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001BDF4E057E0, 16 bytes long.
 Data: <(d&#224;&#244;&#189;           > 28 64 E0 F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001BDF4E05470, 16 bytes long.
 Data: < d&#224;&#244;&#189;           > 00 64 E0 F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001BDF4E05790, 16 bytes long.
 Data: <&#216;c&#224;&#244;&#189;           > D8 63 E0 F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001BDF4E054C0, 16 bytes long.
 Data: <&#176;c&#224;&#244;&#189;           > B0 63 E0 F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001BDF4E055B0, 16 bytes long.
 Data: <pN&#224;&#244;&#189;           > 70 4E E0 F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001BDF4E04E70, 40 bytes long.
 Data: <&#176;U&#224;&#244;&#189;    N&#162;&#246;&#189;   > B0 55 E0 F4 BD 01 00 00 10 4E A2 F6 BD 01 00 00 
{257} normal block at 0x000001BDF4E05740, 16 bytes long.
 Data: < c&#224;&#244;&#189;           > 90 63 E0 F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000001BDF4E05880, 16 bytes long.
 Data: <hc&#224;&#244;&#189;           > 68 63 E0 F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000001BDF4E016F0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{254} normal block at 0x000001BDF4E059C0, 16 bytes long.
 Data: <@c&#224;&#244;&#189;           > 40 63 E0 F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x000001BDF4E06340, 992 bytes long.
 Data: <&#192;Y&#224;&#244;&#189;   &#240; &#224;&#244;&#189;   > C0 59 E0 F4 BD 01 00 00 F0 16 E0 F4 BD 01 00 00 
{89} normal block at 0x000001BDF4E008B0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{88} normal block at 0x000001BDF4DFDC60, 16 bytes long.
 Data: <&#224;G&#224;&#244;&#189;           > E0 47 E0 F4 BD 01 00 00 00 00 00 00 00 00 00 00 
{87} normal block at 0x000001BDF4E047E0, 40 bytes long.
 Data: <`&#220;&#223;&#244;&#189;   &#176; &#224;&#244;&#189;   > 60 DC DF F4 BD 01 00 00 B0 08 E0 F4 BD 01 00 00 
{66} normal block at 0x000001BDF4DFDCB0, 16 bytes long.
 Data: < &#234;&#198;&#207;&#246;           > 80 EA C6 CF F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001BDF4DFD6C0, 16 bytes long.
 Data: <@&#233;&#198;&#207;&#246;           > 40 E9 C6 CF F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001BDF4DFD3A0, 16 bytes long.
 Data: <&#248;W&#195;&#207;&#246;           > F8 57 C3 CF F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001BDF4DFD620, 16 bytes long.
 Data: <&#216;W&#195;&#207;&#246;           > D8 57 C3 CF F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001BDF4DFD5D0, 16 bytes long.
 Data: <P &#195;&#207;&#246;           > 50 04 C3 CF F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001BDF4DFDBC0, 16 bytes long.
 Data: <0 &#195;&#207;&#246;           > 30 04 C3 CF F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001BDF4DFDF30, 16 bytes long.
 Data: <&#224; &#195;&#207;&#246;           > E0 02 C3 CF F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000001BDF4DFDB20, 16 bytes long.
 Data: <  &#195;&#207;&#246;           > 10 04 C3 CF F6 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000001BDF4DFD990, 16 bytes long.
 Data: <p &#195;&#207;&#246;           > 70 04 C3 CF F6 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000001BDF4DFDE90, 16 bytes long.
 Data: < &#192;&#193;&#207;&#246;           > 18 C0 C1 CF F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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