Task 38628546

Name JNK1_RE_A05_A07_r0_5-QUICO_ATM_OpenFF23_NAGL_JNK1_RE-1-6-RND4157_0
Workunit 31578169
Created 24 Apr 2026, 19:43:40 UTC
Sent 24 Apr 2026, 19:43:51 UTC
Report deadline 29 Apr 2026, 19:43:51 UTC
Received 25 Apr 2026, 1:02:09 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 615534
Run time 4 hours 39 min 7 sec
CPU time 4 hours 35 min 27 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 9,067.58 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 678.70 MB
Peak swap size 3.72 GB
Peak disk usage 3.60 GB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
22:23:42 (4624): wrapper (7.9.26016): starting
22:23:42 (4624): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A05_A07_0.pdb
QB_A05_A07_0.xml
QB_A05_A07.inpcrd
QB_A05_A07_input.yaml
QB_A05_A07.pdb
QB_A05_A07.prmtop
QB_A05_A07_sys.xml
run.bat
run.sh
22:23:44 (4624): Library/usr/bin/tar.exe exited; CPU time 0.000000
22:23:44 (4624): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
03:01:42 (4624): C:/Windows/system32/cmd.exe exited; CPU time 16527.968750
03:01:42 (4624): called boinc_finish(0)
0 bytes in 0 Free Blocks.
538 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 198230511 bytes.
Dumping objects ->
{3835309} normal block at 0x0000028A90B4C6C0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835298} normal block at 0x0000028A90B4C3B0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835287} normal block at 0x0000028A8F0B49D0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835276} normal block at 0x0000028A8F0B4960, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835265} normal block at 0x0000028A8F0B4C70, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835234} normal block at 0x0000028A90B99940, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835223} normal block at 0x0000028A8F1197C0, 141 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835220} normal block at 0x0000028A8F0AD6D0, 8 bytes long.
 Data: <  = &#138;   > 00 00 3D 8F 8A 02 00 00 
{3834573} normal block at 0x0000028A8F11A250, 141 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833955} normal block at 0x0000028A8F0AD180, 8 bytes long.
 Data: < &#213;	 &#138;   > 90 D5 09 8F 8A 02 00 00 
..\zip\boinc_zip.cpp(122) : {309} normal block at 0x0000028A8F0A0FC0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000028A8F0A21C0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{293} normal block at 0x0000028A8F0B6270, 16 bytes long.
 Data: <&#232;g  &#138;           > E8 67 0B 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000028A8F0B5FA0, 16 bytes long.
 Data: <&#192;g  &#138;           > C0 67 0B 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000028A8F0B0E30, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{290} normal block at 0x0000028A8F0B5C30, 16 bytes long.
 Data: < g  &#138;           > 98 67 0B 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000028A8F0B5EB0, 16 bytes long.
 Data: <pg  &#138;           > 70 67 0B 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000028A8F0B5A50, 16 bytes long.
 Data: <Hg  &#138;           > 48 67 0B 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000028A8F0B5F50, 16 bytes long.
 Data: < g  &#138;           > 20 67 0B 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000028A8F0B4CE0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{285} normal block at 0x0000028A8F0B5F00, 16 bytes long.
 Data: <&#232;&#240;	 &#138;           > E8 F0 09 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000028A8F0B13D0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{283} normal block at 0x0000028A8F0B5820, 16 bytes long.
 Data: <&#192;&#240;	 &#138;           > C0 F0 09 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000028A8F0B5D70, 16 bytes long.
 Data: < &#240;	 &#138;           > 98 F0 09 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000028A8F0B5780, 16 bytes long.
 Data: <p&#240;	 &#138;           > 70 F0 09 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000028A8F0B57D0, 16 bytes long.
 Data: <H&#240;	 &#138;           > 48 F0 09 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000028A8F0B56E0, 16 bytes long.
 Data: < &#240;	 &#138;           > 20 F0 09 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000028A8F0B58C0, 16 bytes long.
 Data: <&#248;&#239;	 &#138;           > F8 EF 09 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000028A8F0B0950, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{275} normal block at 0x0000028A8F0B6220, 16 bytes long.
 Data: <&#208;&#239;	 &#138;           > D0 EF 09 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000028A8F09EFD0, 320 bytes long.
 Data: < b  &#138;   P	  &#138;   > 20 62 0B 8F 8A 02 00 00 50 09 0B 8F 8A 02 00 00 
{273} normal block at 0x0000028A8F0B5B90, 16 bytes long.
 Data: < g  &#138;           > 00 67 0B 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000028A8F0B6180, 16 bytes long.
 Data: <&#216;f  &#138;           > D8 66 0B 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000028A8F0B0830, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{270} normal block at 0x0000028A8F0B5AA0, 16 bytes long.
 Data: <&#176;f  &#138;           > B0 66 0B 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000028A8F0B0BF0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{268} normal block at 0x0000028A8F0B5730, 16 bytes long.
 Data: <&#248;e  &#138;           > F8 65 0B 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000028A8F0B61D0, 16 bytes long.
 Data: <&#208;e  &#138;           > D0 65 0B 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000028A8F0B5690, 16 bytes long.
 Data: <&#168;e  &#138;           > A8 65 0B 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000028A8F0B5E60, 16 bytes long.
 Data: < e  &#138;           > 80 65 0B 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000028A8F0B59B0, 16 bytes long.
 Data: <Xe  &#138;           > 58 65 0B 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000028A8F0B6400, 16 bytes long.
 Data: <0e  &#138;           > 30 65 0B 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000028A8F0B63B0, 16 bytes long.
 Data: <&#176;J  &#138;           > B0 4A 0B 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000028A8F0B4AB0, 40 bytes long.
 Data: <&#176;c  &#138;   @ &#185; &#138;   > B0 63 0B 8F 8A 02 00 00 40 99 B9 90 8A 02 00 00 
{259} normal block at 0x0000028A8F0B5C80, 16 bytes long.
 Data: < e  &#138;           > 10 65 0B 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000028A8F0B5640, 16 bytes long.
 Data: <&#232;d  &#138;           > E8 64 0B 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x0000028A8F0B08F0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{256} normal block at 0x0000028A8F0B55F0, 16 bytes long.
 Data: <&#192;d  &#138;           > C0 64 0B 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x0000028A8F0B64C0, 992 bytes long.
 Data: <&#240;U  &#138;   &#240;   &#138;   > F0 55 0B 8F 8A 02 00 00 F0 08 0B 8F 8A 02 00 00 
{91} normal block at 0x0000028A8F0B0890, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{90} normal block at 0x0000028A8F0AD7C0, 16 bytes long.
 Data: < &#227;	 &#138;           > 80 E3 09 8F 8A 02 00 00 00 00 00 00 00 00 00 00 
{89} normal block at 0x0000028A8F09E380, 40 bytes long.
 Data: <&#192;&#215;  &#138;       &#138;   > C0 D7 0A 8F 8A 02 00 00 90 08 0B 8F 8A 02 00 00 
{68} normal block at 0x0000028A8F0ADD10, 16 bytes long.
 Data: < &#234;~5&#247;           > 80 EA 7E 35 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000028A8F0AD8B0, 16 bytes long.
 Data: <@&#233;~5&#247;           > 40 E9 7E 35 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000028A8F0AD860, 16 bytes long.
 Data: <&#248;W{5&#247;           > F8 57 7B 35 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000028A8F0AD950, 16 bytes long.
 Data: <&#216;W{5&#247;           > D8 57 7B 35 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000028A8F0ACFF0, 16 bytes long.
 Data: <P {5&#247;           > 50 04 7B 35 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000028A8F0AD3B0, 16 bytes long.
 Data: <0 {5&#247;           > 30 04 7B 35 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000028A8F0AD130, 16 bytes long.
 Data: <&#224; {5&#247;           > E0 02 7B 35 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000028A8F0AD9A0, 16 bytes long.
 Data: <  {5&#247;           > 10 04 7B 35 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000028A8F0AD770, 16 bytes long.
 Data: <p {5&#247;           > 70 04 7B 35 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x0000028A8F0AD680, 16 bytes long.
 Data: < &#192;y5&#247;           > 18 C0 79 35 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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