Task 38626687

Name MCL1_RE_A39_A24_r0_4-QUICO_ATM_OpenFF23_NAGL_MCL1_RE-0-6-RND0623_0
Workunit 31576771
Created 24 Apr 2026, 9:26:24 UTC
Sent 24 Apr 2026, 9:28:13 UTC
Report deadline 29 Apr 2026, 9:28:13 UTC
Received 24 Apr 2026, 19:10:16 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 652185
Run time 1 hours 38 min 1 sec
CPU time 1 hours 38 min 1 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 44,756.39 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 491.73 MB
Peak swap size 6.64 GB
Peak disk usage 2.88 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
19:32:33 (17288): wrapper (7.9.26016): starting
19:32:33 (17288): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A39_A24_0.pdb
QB_A39_A24_0.xml
QB_A39_A24.inpcrd
QB_A39_A24_input.yaml
QB_A39_A24.pdb
QB_A39_A24.prmtop
QB_A39_A24_sys.xml
run.bat
run.sh
19:32:34 (17288): Library/usr/bin/tar.exe exited; CPU time 0.000000
19:32:34 (17288): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\3\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\3\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
21:09:53 (17288): C:/Windows/system32/cmd.exe exited; CPU time 5881.921875
21:09:53 (17288): called boinc_finish(0)
0 bytes in 0 Free Blocks.
538 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 95684889 bytes.
Dumping objects ->
{3835225} normal block at 0x0000025DC2EDB370, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835214} normal block at 0x0000025DC2EDA7A0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835203} normal block at 0x0000025DC2EDAF10, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835192} normal block at 0x0000025DC2EDAC70, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835181} normal block at 0x0000025DC2EB3840, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835150} normal block at 0x0000025DC4AC87C0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835139} normal block at 0x0000025DC2F0C970, 141 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835136} normal block at 0x0000025DC2EAD8E0, 8 bytes long.
 Data: <  &#232;&#194;]   > 00 00 E8 C2 5D 02 00 00 
{3834539} normal block at 0x0000025DC2F0D0C0, 141 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833957} normal block at 0x0000025DC2EADDE0, 8 bytes long.
 Data: <p &#237;&#194;]   > 70 99 ED C2 5D 02 00 00 
..\zip\boinc_zip.cpp(122) : {310} normal block at 0x0000025DC2EA1350, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000025DC2EA21C0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{294} normal block at 0x0000025DC2EB5620, 16 bytes long.
 Data: <xg&#235;&#194;]           > 78 67 EB C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000025DC2EB5C60, 16 bytes long.
 Data: <Pg&#235;&#194;]           > 50 67 EB C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000025DC2EB1370, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{291} normal block at 0x0000025DC2EB5A30, 16 bytes long.
 Data: <(g&#235;&#194;]           > 28 67 EB C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000025DC2EB6020, 16 bytes long.
 Data: < g&#235;&#194;]           > 00 67 EB C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000025DC2EB6390, 16 bytes long.
 Data: <&#216;f&#235;&#194;]           > D8 66 EB C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000025DC2EB5490, 16 bytes long.
 Data: <&#176;f&#235;&#194;]           > B0 66 EB C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000025DC2EB3920, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{286} normal block at 0x0000025DC2EB5AD0, 16 bytes long.
 Data: <X&#199;&#233;&#194;]           > 58 C7 E9 C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000025DC2EB1010, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{284} normal block at 0x0000025DC2EB6160, 16 bytes long.
 Data: <0&#199;&#233;&#194;]           > 30 C7 E9 C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000025DC2EB5D50, 16 bytes long.
 Data: < &#199;&#233;&#194;]           > 08 C7 E9 C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000025DC2EB5760, 16 bytes long.
 Data: <&#224;&#198;&#233;&#194;]           > E0 C6 E9 C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000025DC2EB5FD0, 16 bytes long.
 Data: <&#184;&#198;&#233;&#194;]           > B8 C6 E9 C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000025DC2EB6340, 16 bytes long.
 Data: < &#198;&#233;&#194;]           > 90 C6 E9 C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000025DC2EB58A0, 16 bytes long.
 Data: <h&#198;&#233;&#194;]           > 68 C6 E9 C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000025DC2EB0710, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{276} normal block at 0x0000025DC2EB62F0, 16 bytes long.
 Data: <@&#198;&#233;&#194;]           > 40 C6 E9 C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000025DC2E9C640, 320 bytes long.
 Data: <&#240;b&#235;&#194;]     &#235;&#194;]   > F0 62 EB C2 5D 02 00 00 10 07 EB C2 5D 02 00 00 
{274} normal block at 0x0000025DC2EB5710, 16 bytes long.
 Data: < f&#235;&#194;]           > 90 66 EB C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000025DC2EB6110, 16 bytes long.
 Data: <hf&#235;&#194;]           > 68 66 EB C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000025DC2EB0E90, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{271} normal block at 0x0000025DC2EB5F80, 16 bytes long.
 Data: <@f&#235;&#194;]           > 40 66 EB C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000025DC2EB1070, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{269} normal block at 0x0000025DC2EB5A80, 16 bytes long.
 Data: < e&#235;&#194;]           > 88 65 EB C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000025DC2EB5F30, 16 bytes long.
 Data: <`e&#235;&#194;]           > 60 65 EB C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000025DC2EB5990, 16 bytes long.
 Data: <8e&#235;&#194;]           > 38 65 EB C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000025DC2EB5E90, 16 bytes long.
 Data: < e&#235;&#194;]           > 10 65 EB C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000025DC2EB62A0, 16 bytes long.
 Data: <&#232;d&#235;&#194;]           > E8 64 EB C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000025DC2EB6250, 16 bytes long.
 Data: <&#192;d&#235;&#194;]           > C0 64 EB C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000025DC2EB60C0, 16 bytes long.
 Data: < :&#235;&#194;]           > 00 3A EB C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000025DC2EB3A00, 40 bytes long.
 Data: <&#192;`&#235;&#194;]   &#192;&#135;&#172;&#196;]   > C0 60 EB C2 5D 02 00 00 C0 87 AC C4 5D 02 00 00 
{260} normal block at 0x0000025DC2EB57B0, 16 bytes long.
 Data: <&#160;d&#235;&#194;]           > A0 64 EB C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000025DC2EB5670, 16 bytes long.
 Data: <xd&#235;&#194;]           > 78 64 EB C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000025DC2EB0D10, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{257} normal block at 0x0000025DC2EB5B70, 16 bytes long.
 Data: <Pd&#235;&#194;]           > 50 64 EB C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x0000025DC2EB6450, 992 bytes long.
 Data: <p[&#235;&#194;]     &#235;&#194;]   > 70 5B EB C2 5D 02 00 00 10 0D EB C2 5D 02 00 00 
{92} normal block at 0x0000025DC2EB1430, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{91} normal block at 0x0000025DC2EAD840, 16 bytes long.
 Data: <&#160;<&#235;&#194;]           > A0 3C EB C2 5D 02 00 00 00 00 00 00 00 00 00 00 
{90} normal block at 0x0000025DC2EB3CA0, 40 bytes long.
 Data: <@&#216;&#234;&#194;]   0 &#235;&#194;]   > 40 D8 EA C2 5D 02 00 00 30 14 EB C2 5D 02 00 00 
{69} normal block at 0x0000025DC2EADD90, 16 bytes long.
 Data: < &#234; &#224;&#246;           > 80 EA 90 E0 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000025DC2EAD0C0, 16 bytes long.
 Data: <@&#233; &#224;&#246;           > 40 E9 90 E0 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000025DC2EAD890, 16 bytes long.
 Data: <&#248;W &#224;&#246;           > F8 57 8D E0 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000025DC2EADB10, 16 bytes long.
 Data: <&#216;W &#224;&#246;           > D8 57 8D E0 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000025DC2EAD7F0, 16 bytes long.
 Data: <P  &#224;&#246;           > 50 04 8D E0 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000025DC2EADA20, 16 bytes long.
 Data: <0  &#224;&#246;           > 30 04 8D E0 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000025DC2EAD980, 16 bytes long.
 Data: <&#224;  &#224;&#246;           > E0 02 8D E0 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000025DC2EAD390, 16 bytes long.
 Data: <   &#224;&#246;           > 10 04 8D E0 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000025DC2EAD340, 16 bytes long.
 Data: <p  &#224;&#246;           > 70 04 8D E0 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000025DC2EAD020, 16 bytes long.
 Data: < &#192;&#139;&#224;&#246;           > 18 C0 8B E0 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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