Task 38626616

Name MCL1_RE_A33_A03_r0_3-QUICO_ATM_OpenFF23_NAGL_MCL1_RE-0-6-RND6101_0
Workunit 31576709
Created 24 Apr 2026, 9:21:53 UTC
Sent 24 Apr 2026, 9:24:20 UTC
Report deadline 29 Apr 2026, 9:24:20 UTC
Received 24 Apr 2026, 13:32:19 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 163955
Run time 2 hours 3 min 34 sec
CPU time 1 hours 51 min 38 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 15,720.45 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 509.78 MB
Peak swap size 8.11 GB
Peak disk usage 2.89 GB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
13:29:00 (34072): wrapper (7.9.26016): starting
13:29:00 (34072): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A33_A03_0.pdb
QB_A33_A03_0.xml
QB_A33_A03.inpcrd
QB_A33_A03_input.yaml
QB_A33_A03.pdb
QB_A33_A03.prmtop
QB_A33_A03_sys.xml
run.bat
run.sh
13:29:01 (34072): Library/usr/bin/tar.exe exited; CPU time 0.000000
13:29:01 (34072): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'G:\PROGRAM1\BOINC\DATA\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'G:\PROGRAM1\BOINC\DATA\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
15:32:03 (34072): C:/Windows/system32/cmd.exe exited; CPU time 6698.296875
15:32:03 (34072): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 126044199 bytes.
Dumping objects ->
{3835280} normal block at 0x000002950E78CBD0, 48 bytes long.
 Data: <PATH=G:\PROGRAM1> 50 41 54 48 3D 47 3A 5C 50 52 4F 47 52 41 4D 31 
{3835269} normal block at 0x000002950E78D650, 48 bytes long.
 Data: <HOME=G:\PROGRAM1> 48 4F 4D 45 3D 47 3A 5C 50 52 4F 47 52 41 4D 31 
{3835258} normal block at 0x000002950C9F5220, 48 bytes long.
 Data: <TMP=G:\PROGRAM1\> 54 4D 50 3D 47 3A 5C 50 52 4F 47 52 41 4D 31 5C 
{3835247} normal block at 0x000002950C9F51B0, 48 bytes long.
 Data: <TEMP=G:\PROGRAM1> 54 45 4D 50 3D 47 3A 5C 50 52 4F 47 52 41 4D 31 
{3835236} normal block at 0x000002950C9F4F80, 48 bytes long.
 Data: <TMPDIR=G:\PROGRA> 54 4D 50 44 49 52 3D 47 3A 5C 50 52 4F 47 52 41 
{3835205} normal block at 0x000002950E7D40E0, 64 bytes long.
 Data: <PATH=G:\PROGRAM1> 50 41 54 48 3D 47 3A 5C 50 52 4F 47 52 41 4D 31 
{3835194} normal block at 0x000002950E7EF0B0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835191} normal block at 0x000002950C9ED650, 8 bytes long.
 Data: <  V &#149;   > 00 00 56 0E 95 02 00 00 
{3834568} normal block at 0x000002950E7EF160, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833963} normal block at 0x000002950C9EDD80, 8 bytes long.
 Data: < E&#134; &#149;   > 80 45 86 0E 95 02 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x000002950C9E0B20, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000002950C9E29D0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{297} normal block at 0x000002950C9F6040, 16 bytes long.
 Data: <xn&#159; &#149;           > 78 6E 9F 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000002950C9F5FF0, 16 bytes long.
 Data: <Pn&#159; &#149;           > 50 6E 9F 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000002950C9EFFA0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{294} normal block at 0x000002950C9F5CD0, 16 bytes long.
 Data: <(n&#159; &#149;           > 28 6E 9F 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000002950C9F6540, 16 bytes long.
 Data: < n&#159; &#149;           > 00 6E 9F 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000002950C9F5C80, 16 bytes long.
 Data: <&#216;m&#159; &#149;           > D8 6D 9F 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000002950C9F5C30, 16 bytes long.
 Data: <&#176;m&#159; &#149;           > B0 6D 9F 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000002950C9F5680, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{289} normal block at 0x000002950C9F64F0, 16 bytes long.
 Data: < &#245;  &#149;           > 08 F5 9D 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000002950C9EFDC0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{287} normal block at 0x000002950C9F5BE0, 16 bytes long.
 Data: <&#224;&#244;  &#149;           > E0 F4 9D 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000002950C9F5B90, 16 bytes long.
 Data: <&#184;&#244;  &#149;           > B8 F4 9D 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002950C9F6630, 16 bytes long.
 Data: < &#244;  &#149;           > 90 F4 9D 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002950C9F63B0, 16 bytes long.
 Data: <h&#244;  &#149;           > 68 F4 9D 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002950C9F6AE0, 16 bytes long.
 Data: <@&#244;  &#149;           > 40 F4 9D 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002950C9F6090, 16 bytes long.
 Data: < &#244;  &#149;           > 18 F4 9D 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000002950C9EFD60, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{279} normal block at 0x000002950C9F65E0, 16 bytes long.
 Data: <&#240;&#243;  &#149;           > F0 F3 9D 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000002950C9DF3F0, 320 bytes long.
 Data: <&#224;e&#159; &#149;   `&#253;&#158; &#149;   > E0 65 9F 0C 95 02 00 00 60 FD 9E 0C 95 02 00 00 
{277} normal block at 0x000002950C9F6720, 16 bytes long.
 Data: < m&#159; &#149;           > 90 6D 9F 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000002950C9F6950, 16 bytes long.
 Data: <hm&#159; &#149;           > 68 6D 9F 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002950C9EFE80, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{274} normal block at 0x000002950C9F6900, 16 bytes long.
 Data: <@m&#159; &#149;           > 40 6D 9F 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002950C9EFD00, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{272} normal block at 0x000002950C9F5FA0, 16 bytes long.
 Data: < l&#159; &#149;           > 88 6C 9F 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002950C9F6A90, 16 bytes long.
 Data: <`l&#159; &#149;           > 60 6C 9F 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000002950C9F6400, 16 bytes long.
 Data: <8l&#159; &#149;           > 38 6C 9F 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002950C9F5F50, 16 bytes long.
 Data: < l&#159; &#149;           > 10 6C 9F 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000002950C9F6220, 16 bytes long.
 Data: <&#232;k&#159; &#149;           > E8 6B 9F 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002950C9F6A40, 16 bytes long.
 Data: <&#192;k&#159; &#149;           > C0 6B 9F 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000002950C9F6360, 16 bytes long.
 Data: < R&#159; &#149;           > 90 52 9F 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002950C9F5290, 40 bytes long.
 Data: <`c&#159; &#149;   &#224;@} &#149;   > 60 63 9F 0C 95 02 00 00 E0 40 7D 0E 95 02 00 00 
{263} normal block at 0x000002950C9F5D20, 16 bytes long.
 Data: <&#160;k&#159; &#149;           > A0 6B 9F 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000002950C9F64A0, 16 bytes long.
 Data: <xk&#159; &#149;           > 78 6B 9F 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002950C9EFF40, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{260} normal block at 0x000002950C9F60E0, 16 bytes long.
 Data: <Pk&#159; &#149;           > 50 6B 9F 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000002950C9F6B50, 992 bytes long.
 Data: <&#224;`&#159; &#149;   @&#255;&#158; &#149;   > E0 60 9F 0C 95 02 00 00 40 FF 9E 0C 95 02 00 00 
{95} normal block at 0x000002950C9EFBE0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{94} normal block at 0x000002950C9ED790, 16 bytes long.
 Data: <  &#159; &#149;           > 20 10 9F 0C 95 02 00 00 00 00 00 00 00 00 00 00 
{93} normal block at 0x000002950C9F1020, 40 bytes long.
 Data: < &#215;&#158; &#149;   &#224;&#251;&#158; &#149;   > 90 D7 9E 0C 95 02 00 00 E0 FB 9E 0C 95 02 00 00 
{72} normal block at 0x000002950C9EDBF0, 16 bytes long.
 Data: < &#234;&#192;&#181;&#246;           > 80 EA C0 B5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000002950C9EE050, 16 bytes long.
 Data: <@&#233;&#192;&#181;&#246;           > 40 E9 C0 B5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000002950C9EE2D0, 16 bytes long.
 Data: <&#248;W&#189;&#181;&#246;           > F8 57 BD B5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000002950C9ED920, 16 bytes long.
 Data: <&#216;W&#189;&#181;&#246;           > D8 57 BD B5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000002950C9ED8D0, 16 bytes long.
 Data: <P &#189;&#181;&#246;           > 50 04 BD B5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000002950C9EDCE0, 16 bytes long.
 Data: <0 &#189;&#181;&#246;           > 30 04 BD B5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000002950C9EE370, 16 bytes long.
 Data: <&#224; &#189;&#181;&#246;           > E0 02 BD B5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000002950C9EDD30, 16 bytes long.
 Data: <  &#189;&#181;&#246;           > 10 04 BD B5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000002950C9EDFB0, 16 bytes long.
 Data: <p &#189;&#181;&#246;           > 70 04 BD B5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000002950C9EDB50, 16 bytes long.
 Data: < &#192;&#187;&#181;&#246;           > 18 C0 BB B5 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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