Task 38626270

Name MCL1_RE_A24_A33_r0_2-QUICO_ATM_GAFF2_NAGL_MCL1_RE-0-6-RND4069_0
Workunit 31576377
Created 24 Apr 2026, 9:07:04 UTC
Sent 24 Apr 2026, 9:07:13 UTC
Report deadline 29 Apr 2026, 9:07:13 UTC
Received 24 Apr 2026, 16:47:39 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 650089
Run time 3 hours 44 min
CPU time 3 hours 44 min
Validate state Valid
Credit 750,000.00
Device peak FLOPS 12,744.44 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 555.08 MB
Peak swap size 24.63 GB
Peak disk usage 2.89 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
15:20:10 (18240): wrapper (7.9.26016): starting
15:20:10 (18240): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A24_A33_0.pdb
QB_A24_A33_0.xml
QB_A24_A33.inpcrd
QB_A24_A33_input.yaml
QB_A24_A33.pdb
QB_A24_A33.prmtop
QB_A24_A33_sys.xml
run.bat
run.sh
15:20:11 (18240): Library/usr/bin/tar.exe exited; CPU time 0.000000
15:20:11 (18240): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\3\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\3\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
18:47:22 (18240): C:/Windows/system32/cmd.exe exited; CPU time 13440.218750
18:47:22 (18240): called boinc_finish(0)
0 bytes in 0 Free Blocks.
426 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 154160730 bytes.
Dumping objects ->
{3835556} normal block at 0x00000269B1CCB880, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835545} normal block at 0x00000269B1CA4C60, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835534} normal block at 0x00000269B1CA4BF0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835523} normal block at 0x00000269B1CA4B80, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835512} normal block at 0x00000269B1CA4B10, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835481} normal block at 0x00000269B3A69E80, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835470} normal block at 0x00000269B3A7D520, 85 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835467} normal block at 0x00000269B1C9DCC0, 8 bytes long.
 Data: <  &#196;&#177;i   > 00 00 C4 B1 69 02 00 00 
{3834685} normal block at 0x00000269B3A7C440, 85 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833955} normal block at 0x00000269B1C9D400, 8 bytes long.
 Data: < &#234;z&#179;i   > 90 EA 7A B3 69 02 00 00 
..\zip\boinc_zip.cpp(122) : {309} normal block at 0x00000269B1C90CB0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x00000269B1C92090, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{293} normal block at 0x00000269B1CA5D20, 16 bytes long.
 Data: <&#168;h&#202;&#177;i           > A8 68 CA B1 69 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000269B1CA6130, 16 bytes long.
 Data: < h&#202;&#177;i           > 80 68 CA B1 69 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000269B1CA0F10, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{290} normal block at 0x00000269B1CA6270, 16 bytes long.
 Data: <Xh&#202;&#177;i           > 58 68 CA B1 69 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000269B1CA5690, 16 bytes long.
 Data: <0h&#202;&#177;i           > 30 68 CA B1 69 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000269B1CA5500, 16 bytes long.
 Data: < h&#202;&#177;i           > 08 68 CA B1 69 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x00000269B1CA5CD0, 16 bytes long.
 Data: <&#224;g&#202;&#177;i           > E0 67 CA B1 69 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000269B1CA4E90, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{285} normal block at 0x00000269B1CA5F00, 16 bytes long.
 Data: <&#248;&#182;&#200;&#177;i           > F8 B6 C8 B1 69 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000269B1CA0D30, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{283} normal block at 0x00000269B1CA6220, 16 bytes long.
 Data: <&#208;&#182;&#200;&#177;i           > D0 B6 C8 B1 69 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000269B1CA5410, 16 bytes long.
 Data: <&#168;&#182;&#200;&#177;i           > A8 B6 C8 B1 69 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000269B1CA5910, 16 bytes long.
 Data: < &#182;&#200;&#177;i           > 80 B6 C8 B1 69 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000269B1CA57D0, 16 bytes long.
 Data: <X&#182;&#200;&#177;i           > 58 B6 C8 B1 69 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000269B1CA54B0, 16 bytes long.
 Data: <0&#182;&#200;&#177;i           > 30 B6 C8 B1 69 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000269B1CA5E60, 16 bytes long.
 Data: < &#182;&#200;&#177;i           > 08 B6 C8 B1 69 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000269B1CA13F0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{275} normal block at 0x00000269B1CA5FF0, 16 bytes long.
 Data: <&#224;&#181;&#200;&#177;i           > E0 B5 C8 B1 69 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000269B1C8B5E0, 320 bytes long.
 Data: <&#240;_&#202;&#177;i   &#240; &#202;&#177;i   > F0 5F CA B1 69 02 00 00 F0 13 CA B1 69 02 00 00 
{273} normal block at 0x00000269B1CA5C80, 16 bytes long.
 Data: <&#192;g&#202;&#177;i           > C0 67 CA B1 69 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000269B1CA5A50, 16 bytes long.
 Data: < g&#202;&#177;i           > 98 67 CA B1 69 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000269B1CA0BB0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{270} normal block at 0x00000269B1CA5E10, 16 bytes long.
 Data: <pg&#202;&#177;i           > 70 67 CA B1 69 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000269B1CA1090, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{268} normal block at 0x00000269B1CA6360, 16 bytes long.
 Data: <&#184;f&#202;&#177;i           > B8 66 CA B1 69 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000269B1CA5C30, 16 bytes long.
 Data: < f&#202;&#177;i           > 90 66 CA B1 69 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000269B1CA5BE0, 16 bytes long.
 Data: <hf&#202;&#177;i           > 68 66 CA B1 69 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000269B1CA5640, 16 bytes long.
 Data: <@f&#202;&#177;i           > 40 66 CA B1 69 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000269B1CA5AA0, 16 bytes long.
 Data: < f&#202;&#177;i           > 18 66 CA B1 69 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000269B1CA5B90, 16 bytes long.
 Data: <&#240;e&#202;&#177;i           > F0 65 CA B1 69 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000269B1CA58C0, 16 bytes long.
 Data: <&#176;M&#202;&#177;i           > B0 4D CA B1 69 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x00000269B1CA4DB0, 40 bytes long.
 Data: <&#192;X&#202;&#177;i    &#158;&#166;&#179;i   > C0 58 CA B1 69 02 00 00 80 9E A6 B3 69 02 00 00 
{259} normal block at 0x00000269B1CA55A0, 16 bytes long.
 Data: <&#208;e&#202;&#177;i           > D0 65 CA B1 69 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x00000269B1CA55F0, 16 bytes long.
 Data: <&#168;e&#202;&#177;i           > A8 65 CA B1 69 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x00000269B1CA1450, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{256} normal block at 0x00000269B1CA6310, 16 bytes long.
 Data: < e&#202;&#177;i           > 80 65 CA B1 69 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x00000269B1CA6580, 992 bytes long.
 Data: < c&#202;&#177;i   P &#202;&#177;i   > 10 63 CA B1 69 02 00 00 50 14 CA B1 69 02 00 00 
{91} normal block at 0x00000269B1CA1510, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{90} normal block at 0x00000269B1C9DAE0, 16 bytes long.
 Data: <&#208;^&#201;&#177;i           > D0 5E C9 B1 69 02 00 00 00 00 00 00 00 00 00 00 
{89} normal block at 0x00000269B1C95ED0, 40 bytes long.
 Data: <&#224;&#218;&#201;&#177;i     &#202;&#177;i   > E0 DA C9 B1 69 02 00 00 10 15 CA B1 69 02 00 00 
{68} normal block at 0x00000269B1C9D630, 16 bytes long.
 Data: < &#234;r&#175;&#247;           > 80 EA 72 AF F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000269B1C9D9F0, 16 bytes long.
 Data: <@&#233;r&#175;&#247;           > 40 E9 72 AF F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000269B1C9DE00, 16 bytes long.
 Data: <&#248;Wo&#175;&#247;           > F8 57 6F AF F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000269B1C9CF50, 16 bytes long.
 Data: <&#216;Wo&#175;&#247;           > D8 57 6F AF F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000269B1C9D130, 16 bytes long.
 Data: <P o&#175;&#247;           > 50 04 6F AF F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000269B1C9DE50, 16 bytes long.
 Data: <0 o&#175;&#247;           > 30 04 6F AF F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000269B1C9D810, 16 bytes long.
 Data: <&#224; o&#175;&#247;           > E0 02 6F AF F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x00000269B1C9D310, 16 bytes long.
 Data: <  o&#175;&#247;           > 10 04 6F AF F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x00000269B1C9DA40, 16 bytes long.
 Data: <p o&#175;&#247;           > 70 04 6F AF F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x00000269B1C9D590, 16 bytes long.
 Data: < &#192;m&#175;&#247;           > 18 C0 6D AF F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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