Task 38625901

Name cdk8_A31_A25_r0_4-QUICO_ATM_OpenFF23_NAGL_cdk8-2-6-RND1514_0
Workunit 31576032
Created 24 Apr 2026, 4:38:45 UTC
Sent 24 Apr 2026, 4:38:54 UTC
Report deadline 29 Apr 2026, 4:38:54 UTC
Received 24 Apr 2026, 14:55:47 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 652185
Run time 3 hours 51 min 33 sec
CPU time 3 hours 51 min 33 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 44,756.39 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 968.76 MB
Peak swap size 7.39 GB
Peak disk usage 3.26 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
13:04:16 (19388): wrapper (7.9.26016): starting
13:04:16 (19388): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A31_A25_0.pdb
QB_A31_A25_0.xml
QB_A31_A25.inpcrd
QB_A31_A25_input.yaml
QB_A31_A25.pdb
QB_A31_A25.prmtop
QB_A31_A25_sys.xml
run.bat
run.sh
13:04:17 (19388): Library/usr/bin/tar.exe exited; CPU time 0.015625
13:04:17 (19388): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\3\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\3\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
16:55:03 (19388): C:/Windows/system32/cmd.exe exited; CPU time 13893.218750
16:55:03 (19388): called boinc_finish(0)
0 bytes in 0 Free Blocks.
538 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 224695529 bytes.
Dumping objects ->
{3835225} normal block at 0x00000165497BAF80, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835214} normal block at 0x00000165497BB4C0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835203} normal block at 0x00000165497BAB90, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835192} normal block at 0x00000165497BB450, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835181} normal block at 0x00000165497938B0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835150} normal block at 0x000001654B347AC0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835139} normal block at 0x00000165497ECF20, 141 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835136} normal block at 0x000001654978D7A0, 8 bytes long.
 Data: <  &#176;Ie   > 00 00 B0 49 65 01 00 00 
{3834539} normal block at 0x00000165497EC970, 141 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833957} normal block at 0x000001654978D890, 8 bytes long.
 Data: <p {Ie   > 70 99 7B 49 65 01 00 00 
..\zip\boinc_zip.cpp(122) : {310} normal block at 0x0000016549780D10, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000016549781F80, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{294} normal block at 0x0000016549796390, 16 bytes long.
 Data: <xgyIe           > 78 67 79 49 65 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000016549796200, 16 bytes long.
 Data: <PgyIe           > 50 67 79 49 65 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000016549790F50, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{291} normal block at 0x0000016549795EE0, 16 bytes long.
 Data: <(gyIe           > 28 67 79 49 65 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000016549796110, 16 bytes long.
 Data: < gyIe           > 00 67 79 49 65 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000016549795C60, 16 bytes long.
 Data: <&#216;fyIe           > D8 66 79 49 65 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000165497954E0, 16 bytes long.
 Data: <&#176;fyIe           > B0 66 79 49 65 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000016549793680, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{286} normal block at 0x0000016549795850, 16 bytes long.
 Data: <X&#199;wIe           > 58 C7 77 49 65 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000016549790890, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{284} normal block at 0x0000016549795A30, 16 bytes long.
 Data: <0&#199;wIe           > 30 C7 77 49 65 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000165497956C0, 16 bytes long.
 Data: < &#199;wIe           > 08 C7 77 49 65 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000016549795620, 16 bytes long.
 Data: <&#224;&#198;wIe           > E0 C6 77 49 65 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000165497962F0, 16 bytes long.
 Data: <&#184;&#198;wIe           > B8 C6 77 49 65 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000016549795800, 16 bytes long.
 Data: < &#198;wIe           > 90 C6 77 49 65 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000165497963E0, 16 bytes long.
 Data: <h&#198;wIe           > 68 C6 77 49 65 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000016549790EF0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{276} normal block at 0x00000165497957B0, 16 bytes long.
 Data: <@&#198;wIe           > 40 C6 77 49 65 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001654977C640, 320 bytes long.
 Data: <&#176;WyIe   &#240; yIe   > B0 57 79 49 65 01 00 00 F0 0E 79 49 65 01 00 00 
{274} normal block at 0x00000165497959E0, 16 bytes long.
 Data: < fyIe           > 90 66 79 49 65 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000016549796160, 16 bytes long.
 Data: <hfyIe           > 68 66 79 49 65 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000016549790DD0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{271} normal block at 0x0000016549795F80, 16 bytes long.
 Data: <@fyIe           > 40 66 79 49 65 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000016549790A70, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{269} normal block at 0x00000165497960C0, 16 bytes long.
 Data: < eyIe           > 88 65 79 49 65 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000016549795760, 16 bytes long.
 Data: <`eyIe           > 60 65 79 49 65 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000016549795990, 16 bytes long.
 Data: <8eyIe           > 38 65 79 49 65 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000165497961B0, 16 bytes long.
 Data: < eyIe           > 10 65 79 49 65 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000016549796340, 16 bytes long.
 Data: <&#232;dyIe           > E8 64 79 49 65 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000016549795710, 16 bytes long.
 Data: <&#192;dyIe           > C0 64 79 49 65 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000016549796070, 16 bytes long.
 Data: <0<yIe           > 30 3C 79 49 65 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000016549793C30, 40 bytes long.
 Data: <p`yIe   &#192;z4Ke   > 70 60 79 49 65 01 00 00 C0 7A 34 4B 65 01 00 00 
{260} normal block at 0x0000016549795B20, 16 bytes long.
 Data: <&#160;dyIe           > A0 64 79 49 65 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000016549795BC0, 16 bytes long.
 Data: <xdyIe           > 78 64 79 49 65 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000016549790710, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{257} normal block at 0x0000016549795490, 16 bytes long.
 Data: <PdyIe           > 50 64 79 49 65 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x0000016549796450, 992 bytes long.
 Data: < TyIe     yIe   > 90 54 79 49 65 01 00 00 10 07 79 49 65 01 00 00 
{92} normal block at 0x0000016549790CB0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{91} normal block at 0x000001654978DC00, 16 bytes long.
 Data: < 9yIe           > 90 39 79 49 65 01 00 00 00 00 00 00 00 00 00 00 
{90} normal block at 0x0000016549793990, 40 bytes long.
 Data: < &#220;xIe   &#176; yIe   > 00 DC 78 49 65 01 00 00 B0 0C 79 49 65 01 00 00 
{69} normal block at 0x000001654978D750, 16 bytes long.
 Data: < &#234; &#224;&#246;           > 80 EA 90 E0 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001654978D070, 16 bytes long.
 Data: <@&#233; &#224;&#246;           > 40 E9 90 E0 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001654978D430, 16 bytes long.
 Data: <&#248;W &#224;&#246;           > F8 57 8D E0 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001654978D5C0, 16 bytes long.
 Data: <&#216;W &#224;&#246;           > D8 57 8D E0 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001654978DAC0, 16 bytes long.
 Data: <P  &#224;&#246;           > 50 04 8D E0 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001654978D2A0, 16 bytes long.
 Data: <0  &#224;&#246;           > 30 04 8D E0 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001654978CFD0, 16 bytes long.
 Data: <&#224;  &#224;&#246;           > E0 02 8D E0 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001654978D700, 16 bytes long.
 Data: <   &#224;&#246;           > 10 04 8D E0 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001654978DA70, 16 bytes long.
 Data: <p  &#224;&#246;           > 70 04 8D E0 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001654978D250, 16 bytes long.
 Data: < &#192;&#139;&#224;&#246;           > 18 C0 8B E0 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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