Task 38625344

Name MCL1_A16_A04_r0_2-QUICO_ATM_OpenFF_MCL1-5-6-RND5497_1
Workunit 31570110
Created 23 Apr 2026, 14:36:04 UTC
Sent 23 Apr 2026, 14:36:11 UTC
Report deadline 28 Apr 2026, 14:36:11 UTC
Received 23 Apr 2026, 18:44:10 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 549502
Run time 4 hours 1 min 46 sec
CPU time 3 hours 23 min 41 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 10,073.69 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 479.10 MB
Peak swap size 4.96 GB
Peak disk usage 2.91 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
07:42:56 (20560): wrapper (7.9.26016): starting
07:42:56 (20560): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A16_A04_0.pdb
QB_A16_A04_0.xml
QB_A16_A04.inpcrd
QB_A16_A04_input.yaml
QB_A16_A04.pdb
QB_A16_A04.prmtop
QB_A16_A04_sys.xml
run.bat
run.sh
07:42:57 (20560): Library/usr/bin/tar.exe exited; CPU time 0.000000
07:42:57 (20560): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'D:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'D:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
11:43:00 (20560): C:/Windows/system32/cmd.exe exited; CPU time 12221.125000
11:43:00 (20560): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 231185787 bytes.
Dumping objects ->
{3835222} normal block at 0x00000241BEDB4E40, 48 bytes long.
 Data: <PATH=D:\ProgramD> 50 41 54 48 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835211} normal block at 0x00000241BEDB4EB0, 48 bytes long.
 Data: <HOME=D:\ProgramD> 48 4F 4D 45 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835200} normal block at 0x00000241BEDB4CF0, 48 bytes long.
 Data: <TMP=D:\ProgramDa> 54 4D 50 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835189} normal block at 0x00000241BEDB5380, 48 bytes long.
 Data: <TEMP=D:\ProgramD> 54 45 4D 50 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835178} normal block at 0x00000241BEDB5310, 48 bytes long.
 Data: <TMPDIR=D:\Progra> 54 4D 50 44 49 52 3D 44 3A 5C 50 72 6F 67 72 61 
{3835147} normal block at 0x00000241C0A9BCB0, 64 bytes long.
 Data: <PATH=D:\ProgramD> 50 41 54 48 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835136} normal block at 0x00000241C0AAEAD0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835133} normal block at 0x00000241BEDADD30, 8 bytes long.
 Data: <  !&#191;A   > 00 00 21 BF 41 02 00 00 
{3834530} normal block at 0x00000241C0AAEEF0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833949} normal block at 0x00000241BEDAD330, 8 bytes long.
 Data: <&#176;&#216;&#217;&#190;A   > B0 D8 D9 BE 41 02 00 00 
..\zip\boinc_zip.cpp(122) : {306} normal block at 0x00000241BEDA11A0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000241BEDA1A30, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{290} normal block at 0x00000241BEDB6710, 16 bytes long.
 Data: <&#232;k&#219;&#190;A           > E8 6B DB BE 41 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000241BEDB6580, 16 bytes long.
 Data: <&#192;k&#219;&#190;A           > C0 6B DB BE 41 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000241BEDB1190, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{287} normal block at 0x00000241BEDB6350, 16 bytes long.
 Data: < k&#219;&#190;A           > 98 6B DB BE 41 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000241BEDB5F40, 16 bytes long.
 Data: <pk&#219;&#190;A           > 70 6B DB BE 41 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000241BEDB6530, 16 bytes long.
 Data: <Hk&#219;&#190;A           > 48 6B DB BE 41 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000241BEDB6260, 16 bytes long.
 Data: < k&#219;&#190;A           > 20 6B DB BE 41 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000241BEDB4DD0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{282} normal block at 0x00000241BEDB5F90, 16 bytes long.
 Data: < &#244;&#217;&#190;A           > 08 F4 D9 BE 41 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000241BEDB1C10, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{280} normal block at 0x00000241BEDB5950, 16 bytes long.
 Data: <&#224;&#243;&#217;&#190;A           > E0 F3 D9 BE 41 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000241BEDB6210, 16 bytes long.
 Data: <&#184;&#243;&#217;&#190;A           > B8 F3 D9 BE 41 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000241BEDB5B30, 16 bytes long.
 Data: < &#243;&#217;&#190;A           > 90 F3 D9 BE 41 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000241BEDB6300, 16 bytes long.
 Data: <h&#243;&#217;&#190;A           > 68 F3 D9 BE 41 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000241BEDB60D0, 16 bytes long.
 Data: <@&#243;&#217;&#190;A           > 40 F3 D9 BE 41 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000241BEDB5EF0, 16 bytes long.
 Data: < &#243;&#217;&#190;A           > 18 F3 D9 BE 41 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000241BEDB1BB0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{272} normal block at 0x00000241BEDB6620, 16 bytes long.
 Data: <&#240;&#242;&#217;&#190;A           > F0 F2 D9 BE 41 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000241BED9F2F0, 320 bytes long.
 Data: < f&#219;&#190;A   &#176; &#219;&#190;A   > 20 66 DB BE 41 02 00 00 B0 1B DB BE 41 02 00 00 
{270} normal block at 0x00000241BEDB5EA0, 16 bytes long.
 Data: < k&#219;&#190;A           > 00 6B DB BE 41 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000241BEDB61C0, 16 bytes long.
 Data: <&#216;j&#219;&#190;A           > D8 6A DB BE 41 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000241BEDB11F0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{267} normal block at 0x00000241BEDB6170, 16 bytes long.
 Data: <&#176;j&#219;&#190;A           > B0 6A DB BE 41 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000241BEDB1670, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{265} normal block at 0x00000241BEDB59A0, 16 bytes long.
 Data: <&#248;i&#219;&#190;A           > F8 69 DB BE 41 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000241BEDB5AE0, 16 bytes long.
 Data: <&#208;i&#219;&#190;A           > D0 69 DB BE 41 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000241BEDB5BD0, 16 bytes long.
 Data: <&#168;i&#219;&#190;A           > A8 69 DB BE 41 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000241BEDB5CC0, 16 bytes long.
 Data: < i&#219;&#190;A           > 80 69 DB BE 41 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000241BEDB5900, 16 bytes long.
 Data: <Xi&#219;&#190;A           > 58 69 DB BE 41 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x00000241BEDB6030, 16 bytes long.
 Data: <0i&#219;&#190;A           > 30 69 DB BE 41 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x00000241BEDB5E50, 16 bytes long.
 Data: < P&#219;&#190;A           > 00 50 DB BE 41 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x00000241BEDB5000, 40 bytes long.
 Data: <P^&#219;&#190;A   &#176;&#188;&#169;&#192;A   > 50 5E DB BE 41 02 00 00 B0 BC A9 C0 41 02 00 00 
{256} normal block at 0x00000241BEDB66C0, 16 bytes long.
 Data: < i&#219;&#190;A           > 10 69 DB BE 41 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x00000241BEDB5A90, 16 bytes long.
 Data: <&#232;h&#219;&#190;A           > E8 68 DB BE 41 02 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x00000241BEDB1070, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{253} normal block at 0x00000241BEDB5C20, 16 bytes long.
 Data: <&#192;h&#219;&#190;A           > C0 68 DB BE 41 02 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x00000241BEDB68C0, 992 bytes long.
 Data: < \&#219;&#190;A   p &#219;&#190;A   > 20 5C DB BE 41 02 00 00 70 10 DB BE 41 02 00 00 
{88} normal block at 0x00000241BEDB0E30, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{87} normal block at 0x00000241BEDAD880, 16 bytes long.
 Data: <&#224; &#219;&#190;A           > E0 0C DB BE 41 02 00 00 00 00 00 00 00 00 00 00 
{86} normal block at 0x00000241BEDB0CE0, 40 bytes long.
 Data: < &#216;&#218;&#190;A   0 &#219;&#190;A   > 80 D8 DA BE 41 02 00 00 30 0E DB BE 41 02 00 00 
{65} normal block at 0x00000241BEDADC90, 16 bytes long.
 Data: < &#234; &#193;&#247;           > 80 EA 81 C1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000241BEDAD290, 16 bytes long.
 Data: <@&#233; &#193;&#247;           > 40 E9 81 C1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000241BEDAE1E0, 16 bytes long.
 Data: <&#248;W~&#193;&#247;           > F8 57 7E C1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000241BEDAD8D0, 16 bytes long.
 Data: <&#216;W~&#193;&#247;           > D8 57 7E C1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x00000241BEDADF10, 16 bytes long.
 Data: <P ~&#193;&#247;           > 50 04 7E C1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x00000241BEDAD9C0, 16 bytes long.
 Data: <0 ~&#193;&#247;           > 30 04 7E C1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x00000241BEDAE190, 16 bytes long.
 Data: <&#224; ~&#193;&#247;           > E0 02 7E C1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x00000241BEDAD650, 16 bytes long.
 Data: <  ~&#193;&#247;           > 10 04 7E C1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x00000241BEDAD2E0, 16 bytes long.
 Data: <p ~&#193;&#247;           > 70 04 7E C1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x00000241BEDAD7E0, 16 bytes long.
 Data: < &#192;|&#193;&#247;           > 18 C0 7C C1 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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