Task 38623954

Name CDK2_A06_A05_r0_1-QUICO_ATM_OpenFF_CDK2-3-6-RND5334_1
Workunit 31574476
Created 22 Apr 2026, 5:29:22 UTC
Sent 22 Apr 2026, 5:29:27 UTC
Report deadline 27 Apr 2026, 5:29:27 UTC
Received 25 Apr 2026, 6:55:04 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 400693
Run time 18 hours 10 min 39 sec
CPU time 17 hours 34 min 32 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 4,172.18 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 728.81 MB
Peak swap size 3.81 GB
Peak disk usage 3.75 GB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
14:47:22 (9264): wrapper (7.9.26016): starting
14:47:22 (9264): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A06_A05_0.pdb
QB_A06_A05_0.xml
QB_A06_A05.inpcrd
QB_A06_A05_input.yaml
QB_A06_A05.pdb
QB_A06_A05.prmtop
QB_A06_A05_sys.xml
run.bat
run.sh
14:47:26 (9264): Library/usr/bin/tar.exe exited; CPU time 0.000000
14:47:26 (9264): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
08:53:27 (9264): C:/Windows/system32/cmd.exe exited; CPU time 63272.062500
08:53:27 (9264): called boinc_finish(0)
0 bytes in 0 Free Blocks.
546 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 742942159 bytes.
Dumping objects ->
{3835132} normal block at 0x000001F1FF7C09C0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835121} normal block at 0x000001F1FF7C1280, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835110} normal block at 0x000001F1FF7C17C0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835099} normal block at 0x000001F1FF7C0DB0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835088} normal block at 0x000001F1FF7C1750, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835057} normal block at 0x000001F1FF905210, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835046} normal block at 0x000001F1FF2AE0E0, 145 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835043} normal block at 0x000001F1FF256920, 8 bytes long.
 Data: <   &#255;&#241;   > 00 00 1E FF F1 01 00 00 
{3834495} normal block at 0x000001F1FF2ACE30, 145 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833955} normal block at 0x000001F1FF257730, 8 bytes long.
 Data: <P"&#150;&#255;&#241;   > 50 22 96 FF F1 01 00 00 
..\zip\boinc_zip.cpp(122) : {309} normal block at 0x000001F1FF261890, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001F1FF25D190, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{293} normal block at 0x000001F1FF2627E0, 16 bytes long.
 Data: <&#200;>&&#255;&#241;           > C8 3E 26 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001F1FF263730, 16 bytes long.
 Data: <&#160;>&&#255;&#241;           > A0 3E 26 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001F1FF25B9D0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{290} normal block at 0x000001F1FF263690, 16 bytes long.
 Data: <x>&&#255;&#241;           > 78 3E 26 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001F1FF263640, 16 bytes long.
 Data: <P>&&#255;&#241;           > 50 3E 26 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001F1FF263500, 16 bytes long.
 Data: <(>&&#255;&#241;           > 28 3E 26 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001F1FF2632D0, 16 bytes long.
 Data: < >&&#255;&#241;           > 00 3E 26 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001F1FF25DA90, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{285} normal block at 0x000001F1FF2635F0, 16 bytes long.
 Data: <8&#191;$&#255;&#241;           > 38 BF 24 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001F1FF25C150, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{283} normal block at 0x000001F1FF263190, 16 bytes long.
 Data: < &#191;$&#255;&#241;           > 10 BF 24 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001F1FF262BA0, 16 bytes long.
 Data: <&#232;&#190;$&#255;&#241;           > E8 BE 24 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001F1FF263410, 16 bytes long.
 Data: <&#192;&#190;$&#255;&#241;           > C0 BE 24 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001F1FF262C90, 16 bytes long.
 Data: < &#190;$&#255;&#241;           > 98 BE 24 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001F1FF263000, 16 bytes long.
 Data: <p&#190;$&#255;&#241;           > 70 BE 24 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001F1FF262F10, 16 bytes long.
 Data: <H&#190;$&#255;&#241;           > 48 BE 24 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001F1FF25C030, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{275} normal block at 0x000001F1FF263140, 16 bytes long.
 Data: < &#190;$&#255;&#241;           > 20 BE 24 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001F1FF24BE20, 320 bytes long.
 Data: <@1&&#255;&#241;   0&#192;%&#255;&#241;   > 40 31 26 FF F1 01 00 00 30 C0 25 FF F1 01 00 00 
{273} normal block at 0x000001F1FF262EC0, 16 bytes long.
 Data: <&#224;=&&#255;&#241;           > E0 3D 26 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001F1FF262B50, 16 bytes long.
 Data: <&#184;=&&#255;&#241;           > B8 3D 26 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001F1FF25BFD0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{270} normal block at 0x000001F1FF262CE0, 16 bytes long.
 Data: < =&&#255;&#241;           > 90 3D 26 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001F1FF25C0F0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{268} normal block at 0x000001F1FF262E70, 16 bytes long.
 Data: <&#216;<&&#255;&#241;           > D8 3C 26 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001F1FF262FB0, 16 bytes long.
 Data: <&#176;<&&#255;&#241;           > B0 3C 26 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001F1FF262E20, 16 bytes long.
 Data: < <&&#255;&#241;           > 88 3C 26 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001F1FF262920, 16 bytes long.
 Data: <`<&&#255;&#241;           > 60 3C 26 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001F1FF262F60, 16 bytes long.
 Data: <8<&&#255;&#241;           > 38 3C 26 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001F1FF263280, 16 bytes long.
 Data: < <&&#255;&#241;           > 10 3C 26 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001F1FF2635A0, 16 bytes long.
 Data: <`&#216;%&#255;&#241;           > 60 D8 25 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001F1FF25D860, 40 bytes long.
 Data: <&#160;5&&#255;&#241;    R &#255;&#241;   > A0 35 26 FF F1 01 00 00 10 52 90 FF F1 01 00 00 
{259} normal block at 0x000001F1FF262830, 16 bytes long.
 Data: <&#240;;&&#255;&#241;           > F0 3B 26 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001F1FF263460, 16 bytes long.
 Data: <&#200;;&&#255;&#241;           > C8 3B 26 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x000001F1FF25C570, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{256} normal block at 0x000001F1FF262B00, 16 bytes long.
 Data: <&#160;;&&#255;&#241;           > A0 3B 26 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000001F1FF263BA0, 992 bytes long.
 Data: < +&&#255;&#241;   p&#197;%&#255;&#241;   > 00 2B 26 FF F1 01 00 00 70 C5 25 FF F1 01 00 00 
{91} normal block at 0x000001F1FF25B7F0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{90} normal block at 0x000001F1FF257500, 16 bytes long.
 Data: <&#176;&#217;%&#255;&#241;           > B0 D9 25 FF F1 01 00 00 00 00 00 00 00 00 00 00 
{89} normal block at 0x000001F1FF25D9B0, 40 bytes long.
 Data: < u%&#255;&#241;   &#240;&#183;%&#255;&#241;   > 00 75 25 FF F1 01 00 00 F0 B7 25 FF F1 01 00 00 
{68} normal block at 0x000001F1FF2570A0, 16 bytes long.
 Data: < &#234;&#222;&#213;&#246;           > 80 EA DE D5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001F1FF2574B0, 16 bytes long.
 Data: <@&#233;&#222;&#213;&#246;           > 40 E9 DE D5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001F1FF257190, 16 bytes long.
 Data: <&#248;W&#219;&#213;&#246;           > F8 57 DB D5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001F1FF256F10, 16 bytes long.
 Data: <&#216;W&#219;&#213;&#246;           > D8 57 DB D5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001F1FF257640, 16 bytes long.
 Data: <P &#219;&#213;&#246;           > 50 04 DB D5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001F1FF257050, 16 bytes long.
 Data: <0 &#219;&#213;&#246;           > 30 04 DB D5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001F1FF257690, 16 bytes long.
 Data: <&#224; &#219;&#213;&#246;           > E0 02 DB D5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001F1FF256F60, 16 bytes long.
 Data: <  &#219;&#213;&#246;           > 10 04 DB D5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001F1FF256E70, 16 bytes long.
 Data: <p &#219;&#213;&#246;           > 70 04 DB D5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000001F1FF257550, 16 bytes long.
 Data: < &#192;&#217;&#213;&#246;           > 18 C0 D9 D5 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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