Task 38623916
| Name | TYK2_A04_A02_r0_2-QUICO_ATM_OpenFF_TYK2-5-6-RND8990_0 |
| Workunit | 31574451 |
| Created | 22 Apr 2026, 3:47:17 UTC |
| Sent | 22 Apr 2026, 3:47:25 UTC |
| Report deadline | 27 Apr 2026, 3:47:25 UTC |
| Received | 22 Apr 2026, 10:16:40 UTC |
| Server state | Over |
| Outcome | Computation error |
| Client state | Compute error |
| Exit status | 195 (0x000000C3) EXIT_CHILD_FAILED |
| Computer ID | 412361 |
| Run time | 6 hours 24 min 27 sec |
| CPU time | 5 hours 59 min 28 sec |
| Validate state | Invalid |
| Credit | 0.00 |
| Device peak FLOPS | 7,184.93 GFLOPS |
| Application version | ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121) windows_x86_64 |
| Peak working set size | 624.46 MB |
| Peak swap size | 3.69 GB |
| Peak disk usage | 3.06 GB |
Stderr output
<core_client_version>7.22.2</core_client_version>
<![CDATA[
<message>
The operating system cannot run %1.
(0xc3) - exit code 195 (0xc3)</message>
<stderr_txt>
23:52:38 (59584): wrapper (7.9.26016): starting
23:52:38 (59584): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A04_A02_0.pdb
QB_A04_A02_0.xml
QB_A04_A02.inpcrd
QB_A04_A02_input.yaml
QB_A04_A02.pdb
QB_A04_A02.prmtop
QB_A04_A02_sys.xml
run.bat
run.sh
23:52:41 (59584): Library/usr/bin/tar.exe exited; CPU time 0.000000
23:52:41 (59584): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
Traceback (most recent call last):
File "<frozen runpy>", line 198, in _run_module_as_main
File "<frozen runpy>", line 88, in _run_code
File "C:\ProgramData\BOINC\slots\0\Scripts\rbfe_production.exe\__main__.py", line 7, in <module>
File "C:\ProgramData\BOINC\slots\0\Lib\site-packages\atom_openmm\rbfe_production.py", line 33, in rbfe_production
rx.scheduleJobs()
File "C:\ProgramData\BOINC\slots\0\Lib\site-packages\atom_openmm\async_re.py", line 321, in scheduleJobs
self.transport.ProcessJobQueue(min_time,cycle_time)
File "C:\ProgramData\BOINC\slots\0\Lib\site-packages\atom_openmm\local_openmm_transport.py", line 186, in ProcessJobQueue
self.isDone(repl,0)
File "C:\ProgramData\BOINC\slots\0\Lib\site-packages\atom_openmm\local_openmm_transport.py", line 287, in isDone
retcode = self._update_replica(job)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\ProgramData\BOINC\slots\0\Lib\site-packages\atom_openmm\local_openmm_transport.py", line 212, in _update_replica
pot = job['openmm_worker'].get_energy()
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\ProgramData\BOINC\slots\0\Lib\site-packages\atom_openmm\ommworker.py", line 451, in get_energy
return self._worker_getenergy()
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\ProgramData\BOINC\slots\0\Lib\site-packages\atom_openmm\ommworker.py", line 400, in _worker_getenergy
state = self.simulation.context.getState(getEnergy = True)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\ProgramData\BOINC\slots\0\Lib\site-packages\openmm\openmm.py", line 5022, in getState
state = _openmm.Context_getState(self, types, enforcePeriodicBox, groups_mask)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
openmm.OpenMMException: Particle coordinate is NaN. For more information, see https://github.com/openmm/openmm/wiki/Frequently-Asked-Questions#nan
06:15:14 (59584): C:/Windows/system32/cmd.exe exited; CPU time 21568.906250
06:15:14 (59584): app exit status: 0x16
06:15:14 (59584): called boinc_finish(195)
0 bytes in 0 Free Blocks.
428 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 239094494 bytes.
Dumping objects ->
{3835302} normal block at 0x000001A404F12400, 48 bytes long.
Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44
{3835291} normal block at 0x000001A404F12D30, 48 bytes long.
Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44
{3835280} normal block at 0x000001A404F12630, 48 bytes long.
Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61
{3835269} normal block at 0x000001A404F125C0, 48 bytes long.
Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44
{3835258} normal block at 0x000001A404F13040, 48 bytes long.
Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61
{3835227} normal block at 0x000001A404F1AB40, 64 bytes long.
Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44
{3835216} normal block at 0x000001A404F7B400, 86 bytes long.
Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65
..\api\boinc_api.cpp(309) : {3835213} normal block at 0x000001A4034B7580, 8 bytes long.
Data: < D ¤ > 00 00 44 03 A4 01 00 00
{3834569} normal block at 0x000001A404F7B540, 86 bytes long.
Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65
{3833955} normal block at 0x000001A4034B7A30, 8 bytes long.
Data: < *ÿ ¤ > 00 2A FF 04 A4 01 00 00
..\zip\boinc_zip.cpp(122) : {309} normal block at 0x000001A4034C1F00, 260 bytes long.
Data: < > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
{294} normal block at 0x000001A4034A9B70, 80 bytes long.
Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C
{293} normal block at 0x000001A4034C3530, 16 bytes long.
Data: <ø?L ¤ > F8 3F 4C 03 A4 01 00 00 00 00 00 00 00 00 00 00
{292} normal block at 0x000001A4034C3710, 16 bytes long.
Data: <Ð?L ¤ > D0 3F 4C 03 A4 01 00 00 00 00 00 00 00 00 00 00
{291} normal block at 0x000001A4034BDBC0, 32 bytes long.
Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D
{290} normal block at 0x000001A4034C34E0, 16 bytes long.
Data: <¨?L ¤ > A8 3F 4C 03 A4 01 00 00 00 00 00 00 00 00 00 00
{289} normal block at 0x000001A4034C3440, 16 bytes long.
Data: < ?L ¤ > 80 3F 4C 03 A4 01 00 00 00 00 00 00 00 00 00 00
{288} normal block at 0x000001A4034C3A30, 16 bytes long.
Data: <X?L ¤ > 58 3F 4C 03 A4 01 00 00 00 00 00 00 00 00 00 00
{287} normal block at 0x000001A4034C33A0, 16 bytes long.
Data: <0?L ¤ > 30 3F 4C 03 A4 01 00 00 00 00 00 00 00 00 00 00
{286} normal block at 0x000001A4034BBDC0, 48 bytes long.
Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F
{285} normal block at 0x000001A4034C3BC0, 16 bytes long.
Data: < \J ¤ > 18 5C 4A 03 A4 01 00 00 00 00 00 00 00 00 00 00
{284} normal block at 0x000001A4034BD800, 32 bytes long.
Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69
{283} normal block at 0x000001A4034C3350, 16 bytes long.
Data: <ð[J ¤ > F0 5B 4A 03 A4 01 00 00 00 00 00 00 00 00 00 00
{281} normal block at 0x000001A4034C39E0, 16 bytes long.
Data: <È[J ¤ > C8 5B 4A 03 A4 01 00 00 00 00 00 00 00 00 00 00
{280} normal block at 0x000001A4034C3030, 16 bytes long.
Data: < [J ¤ > A0 5B 4A 03 A4 01 00 00 00 00 00 00 00 00 00 00
{279} normal block at 0x000001A4034C2FE0, 16 bytes long.
Data: <x[J ¤ > 78 5B 4A 03 A4 01 00 00 00 00 00 00 00 00 00 00
{278} normal block at 0x000001A4034C32B0, 16 bytes long.
Data: <P[J ¤ > 50 5B 4A 03 A4 01 00 00 00 00 00 00 00 00 00 00
{277} normal block at 0x000001A4034C33F0, 16 bytes long.
Data: <([J ¤ > 28 5B 4A 03 A4 01 00 00 00 00 00 00 00 00 00 00
{276} normal block at 0x000001A4034BD2C0, 32 bytes long.
Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55
{275} normal block at 0x000001A4034C3C60, 16 bytes long.
Data: < [J ¤ > 00 5B 4A 03 A4 01 00 00 00 00 00 00 00 00 00 00
{274} normal block at 0x000001A4034A5B00, 320 bytes long.
Data: <`<L ¤ ÀÒK ¤ > 60 3C 4C 03 A4 01 00 00 C0 D2 4B 03 A4 01 00 00
{273} normal block at 0x000001A4034C3300, 16 bytes long.
Data: < ?L ¤ > 10 3F 4C 03 A4 01 00 00 00 00 00 00 00 00 00 00
{272} normal block at 0x000001A4034C3620, 16 bytes long.
Data: <è>L ¤ > E8 3E 4C 03 A4 01 00 00 00 00 00 00 00 00 00 00
{271} normal block at 0x000001A4034BDD40, 32 bytes long.
Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65
{270} normal block at 0x000001A4034C3210, 16 bytes long.
Data: <À>L ¤ > C0 3E 4C 03 A4 01 00 00 00 00 00 00 00 00 00 00
{269} normal block at 0x000001A4034BDC20, 32 bytes long.
Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62
{268} normal block at 0x000001A4034C2E50, 16 bytes long.
Data: < >L ¤ > 08 3E 4C 03 A4 01 00 00 00 00 00 00 00 00 00 00
{267} normal block at 0x000001A4034C3990, 16 bytes long.
Data: <à=L ¤ > E0 3D 4C 03 A4 01 00 00 00 00 00 00 00 00 00 00
{266} normal block at 0x000001A4034C2EA0, 16 bytes long.
Data: <¸=L ¤ > B8 3D 4C 03 A4 01 00 00 00 00 00 00 00 00 00 00
{265} normal block at 0x000001A4034C3490, 16 bytes long.
Data: < =L ¤ > 90 3D 4C 03 A4 01 00 00 00 00 00 00 00 00 00 00
{264} normal block at 0x000001A4034C3940, 16 bytes long.
Data: <h=L ¤ > 68 3D 4C 03 A4 01 00 00 00 00 00 00 00 00 00 00
{263} normal block at 0x000001A4034C37B0, 16 bytes long.
Data: <@=L ¤ > 40 3D 4C 03 A4 01 00 00 00 00 00 00 00 00 00 00
{261} normal block at 0x000001A4034C3760, 16 bytes long.
Data: <à¼K ¤ > E0 BC 4B 03 A4 01 00 00 00 00 00 00 00 00 00 00
{260} normal block at 0x000001A4034BBCE0, 40 bytes long.
Data: <`7L ¤ @«ñ ¤ > 60 37 4C 03 A4 01 00 00 40 AB F1 04 A4 01 00 00
{259} normal block at 0x000001A4034C3670, 16 bytes long.
Data: < =L ¤ > 20 3D 4C 03 A4 01 00 00 00 00 00 00 00 00 00 00
{258} normal block at 0x000001A4034C3120, 16 bytes long.
Data: <ø<L ¤ > F8 3C 4C 03 A4 01 00 00 00 00 00 00 00 00 00 00
{257} normal block at 0x000001A4034BD980, 32 bytes long.
Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F
{256} normal block at 0x000001A4034C38F0, 16 bytes long.
Data: <Ð<L ¤ > D0 3C 4C 03 A4 01 00 00 00 00 00 00 00 00 00 00
{255} normal block at 0x000001A4034C3CD0, 992 bytes long.
Data: <ð8L ¤ ÙK ¤ > F0 38 4C 03 A4 01 00 00 80 D9 4B 03 A4 01 00 00
{91} normal block at 0x000001A4034BDE00, 32 bytes long.
Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F
{90} normal block at 0x000001A4034B7760, 16 bytes long.
Data: <ð¿K ¤ > F0 BF 4B 03 A4 01 00 00 00 00 00 00 00 00 00 00
{89} normal block at 0x000001A4034BBFF0, 40 bytes long.
Data: <`wK ¤ ÞK ¤ > 60 77 4B 03 A4 01 00 00 00 DE 4B 03 A4 01 00 00
{68} normal block at 0x000001A4034B74E0, 16 bytes long.
Data: < êéñö > 80 EA E9 F1 F6 7F 00 00 00 00 00 00 00 00 00 00
{67} normal block at 0x000001A4034B7490, 16 bytes long.
Data: <@ééñö > 40 E9 E9 F1 F6 7F 00 00 00 00 00 00 00 00 00 00
{66} normal block at 0x000001A4034B75D0, 16 bytes long.
Data: <øWæñö > F8 57 E6 F1 F6 7F 00 00 00 00 00 00 00 00 00 00
{65} normal block at 0x000001A4034B73A0, 16 bytes long.
Data: <ØWæñö > D8 57 E6 F1 F6 7F 00 00 00 00 00 00 00 00 00 00
{64} normal block at 0x000001A4034B73F0, 16 bytes long.
Data: <P æñö > 50 04 E6 F1 F6 7F 00 00 00 00 00 00 00 00 00 00
{63} normal block at 0x000001A4034B7350, 16 bytes long.
Data: <0 æñö > 30 04 E6 F1 F6 7F 00 00 00 00 00 00 00 00 00 00
{62} normal block at 0x000001A4034B7300, 16 bytes long.
Data: <à æñö > E0 02 E6 F1 F6 7F 00 00 00 00 00 00 00 00 00 00
{61} normal block at 0x000001A4034B7990, 16 bytes long.
Data: < æñö > 10 04 E6 F1 F6 7F 00 00 00 00 00 00 00 00 00 00
{60} normal block at 0x000001A4034B72B0, 16 bytes long.
Data: <p æñö > 70 04 E6 F1 F6 7F 00 00 00 00 00 00 00 00 00 00
{59} normal block at 0x000001A4034B76C0, 16 bytes long.
Data: < Àäñö > 18 C0 E4 F1 F6 7F 00 00 00 00 00 00 00 00 00 00
Object dump complete.
</stderr_txt>
]]>
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