Task 38623646

Name HIF2A_2_A20_A19_r0_1-QUICO_ATM_GAFF2_NAGL_hif2a_2-2-6-RND1820_1
Workunit 31574222
Created 21 Apr 2026, 18:53:34 UTC
Sent 21 Apr 2026, 18:53:39 UTC
Report deadline 26 Apr 2026, 18:53:39 UTC
Received 22 Apr 2026, 8:04:47 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 651995
Run time 4 hours 6 min 55 sec
CPU time 3 hours 30 min 2 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 23,189.48 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 508.86 MB
Peak swap size 12.65 GB
Peak disk usage 2.89 GB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
05:58:08 (29452): wrapper (7.9.26016): starting
05:58:08 (29452): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A20_A19_0.pdb
QB_A20_A19_0.xml
QB_A20_A19.inpcrd
QB_A20_A19_input.yaml
QB_A20_A19.pdb
QB_A20_A19.prmtop
QB_A20_A19_sys.xml
run.bat
run.sh
05:58:09 (29452): Library/usr/bin/tar.exe exited; CPU time 0.000000
05:58:09 (29452): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'c:\Boinc\004\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'c:\Boinc\004\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
10:04:15 (29452): C:/Windows/system32/cmd.exe exited; CPU time 12602.312500
10:04:15 (29452): called boinc_finish(0)
0 bytes in 0 Free Blocks.
456 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 437682399 bytes.
Dumping objects ->
{3835538} normal block at 0x000001B25F227210, 48 bytes long.
 Data: <PATH=c:\boinc\00> 50 41 54 48 3D 63 3A 5C 62 6F 69 6E 63 5C 30 30 
{3835527} normal block at 0x000001B260F53900, 32 bytes long.
 Data: <HOME=c:\boinc\00> 48 4F 4D 45 3D 63 3A 5C 62 6F 69 6E 63 5C 30 30 
{3835516} normal block at 0x000001B260F534E0, 32 bytes long.
 Data: <TMP=c:\boinc\004> 54 4D 50 3D 63 3A 5C 62 6F 69 6E 63 5C 30 30 34 
{3835505} normal block at 0x000001B260F53240, 32 bytes long.
 Data: <TEMP=c:\boinc\00> 54 45 4D 50 3D 63 3A 5C 62 6F 69 6E 63 5C 30 30 
{3835494} normal block at 0x000001B260F52640, 32 bytes long.
 Data: <TMPDIR=c:\boinc\> 54 4D 50 44 49 52 3D 63 3A 5C 62 6F 69 6E 63 5C 
{3835463} normal block at 0x000001B25F227520, 48 bytes long.
 Data: <PATH=c:\boinc\00> 50 41 54 48 3D 63 3A 5C 62 6F 69 6E 63 5C 30 30 
{3835452} normal block at 0x000001B25F27CB60, 140 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835449} normal block at 0x000001B25F21F360, 8 bytes long.
 Data: <   _&#178;   > 00 00 1C 5F B2 01 00 00 
{3834673} normal block at 0x000001B25F27D790, 140 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833945} normal block at 0x000001B25F21F6D0, 8 bytes long.
 Data: <&#192;&#213; _&#178;   > C0 D5 20 5F B2 01 00 00 
..\zip\boinc_zip.cpp(122) : {304} normal block at 0x000001B25F210710, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001B25F2122F0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{288} normal block at 0x000001B25F227D20, 16 bytes long.
 Data: <&#216;!"_&#178;           > D8 21 22 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001B25F227960, 16 bytes long.
 Data: <&#176;!"_&#178;           > B0 21 22 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001B25F222B40, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{285} normal block at 0x000001B25F2284F0, 16 bytes long.
 Data: < !"_&#178;           > 88 21 22 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001B25F228040, 16 bytes long.
 Data: <`!"_&#178;           > 60 21 22 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001B25F227FF0, 16 bytes long.
 Data: <8!"_&#178;           > 38 21 22 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001B25F227EB0, 16 bytes long.
 Data: < !"_&#178;           > 10 21 22 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001B25F227590, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{280} normal block at 0x000001B25F2278C0, 16 bytes long.
 Data: <&#216;&#236; _&#178;           > D8 EC 20 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001B25F2227E0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{278} normal block at 0x000001B25F2284A0, 16 bytes long.
 Data: <&#176;&#236; _&#178;           > B0 EC 20 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001B25F227780, 16 bytes long.
 Data: < &#236; _&#178;           > 88 EC 20 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001B25F227C30, 16 bytes long.
 Data: <`&#236; _&#178;           > 60 EC 20 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001B25F228630, 16 bytes long.
 Data: <8&#236; _&#178;           > 38 EC 20 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001B25F228450, 16 bytes long.
 Data: < &#236; _&#178;           > 10 EC 20 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001B25F227E60, 16 bytes long.
 Data: <&#232;&#235; _&#178;           > E8 EB 20 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001B25F223200, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{270} normal block at 0x000001B25F2279B0, 16 bytes long.
 Data: <&#192;&#235; _&#178;           > C0 EB 20 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001B25F20EBC0, 320 bytes long.
 Data: <&#176;y"_&#178;    2"_&#178;   > B0 79 22 5F B2 01 00 00 00 32 22 5F B2 01 00 00 
{268} normal block at 0x000001B25F227F00, 16 bytes long.
 Data: <&#240; "_&#178;           > F0 20 22 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001B25F228400, 16 bytes long.
 Data: <&#200; "_&#178;           > C8 20 22 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001B25F222D80, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{265} normal block at 0x000001B25F228310, 16 bytes long.
 Data: <&#160; "_&#178;           > A0 20 22 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001B25F222E40, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{263} normal block at 0x000001B25F227AF0, 16 bytes long.
 Data: <&#232; "_&#178;           > E8 1F 22 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001B25F2283B0, 16 bytes long.
 Data: <&#192; "_&#178;           > C0 1F 22 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001B25F227F50, 16 bytes long.
 Data: <  "_&#178;           > 98 1F 22 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001B25F228270, 16 bytes long.
 Data: <p "_&#178;           > 70 1F 22 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001B25F228360, 16 bytes long.
 Data: <H "_&#178;           > 48 1F 22 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001B25F227BE0, 16 bytes long.
 Data: <  "_&#178;           > 20 1F 22 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000001B25F228180, 16 bytes long.
 Data: < r"_&#178;           > 80 72 22 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000001B25F227280, 40 bytes long.
 Data: <  "_&#178;    u"_&#178;   > 80 81 22 5F B2 01 00 00 20 75 22 5F B2 01 00 00 
{254} normal block at 0x000001B25F2285E0, 16 bytes long.
 Data: <  "_&#178;           > 00 1F 22 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x000001B25F2280E0, 16 bytes long.
 Data: <&#216; "_&#178;           > D8 1E 22 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x000001B25F223380, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{251} normal block at 0x000001B25F227E10, 16 bytes long.
 Data: <&#176; "_&#178;           > B0 1E 22 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{250} normal block at 0x000001B25F221EB0, 992 bytes long.
 Data: < ~"_&#178;    3"_&#178;   > 10 7E 22 5F B2 01 00 00 80 33 22 5F B2 01 00 00 
{86} normal block at 0x000001B25F223260, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{85} normal block at 0x000001B25F21F720, 16 bytes long.
 Data: <0&#197; _&#178;           > 30 C5 20 5F B2 01 00 00 00 00 00 00 00 00 00 00 
{84} normal block at 0x000001B25F20C530, 40 bytes long.
 Data: < &#247;!_&#178;   `2"_&#178;   > 20 F7 21 5F B2 01 00 00 60 32 22 5F B2 01 00 00 
{63} normal block at 0x000001B25F21F8B0, 16 bytes long.
 Data: < &#234;0&#159;&#246;           > 80 EA 30 9F F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001B25F21F2C0, 16 bytes long.
 Data: <@&#233;0&#159;&#246;           > 40 E9 30 9F F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001B25F21FA90, 16 bytes long.
 Data: <&#248;W-&#159;&#246;           > F8 57 2D 9F F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001B25F21FB80, 16 bytes long.
 Data: <&#216;W-&#159;&#246;           > D8 57 2D 9F F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000001B25F21F590, 16 bytes long.
 Data: <P -&#159;&#246;           > 50 04 2D 9F F6 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000001B25F21F3B0, 16 bytes long.
 Data: <0 -&#159;&#246;           > 30 04 2D 9F F6 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000001B25F21FD60, 16 bytes long.
 Data: <&#224; -&#159;&#246;           > E0 02 2D 9F F6 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x000001B25F21F4F0, 16 bytes long.
 Data: <  -&#159;&#246;           > 10 04 2D 9F F6 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x000001B25F21F810, 16 bytes long.
 Data: <p -&#159;&#246;           > 70 04 2D 9F F6 7F 00 00 00 00 00 00 00 00 00 00 
{54} normal block at 0x000001B25F21F450, 16 bytes long.
 Data: < &#192;+&#159;&#246;           > 18 C0 2B 9F F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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