Task 38623571

Name hif2a_2_A39_A30_r0_2-QUICO_ATM_OpenFF_NAGL_hif2a_2-4-6-RND6361_0
Workunit 31574161
Created 21 Apr 2026, 16:33:17 UTC
Sent 21 Apr 2026, 16:33:19 UTC
Report deadline 26 Apr 2026, 16:33:19 UTC
Received 21 Apr 2026, 20:03:36 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 598310
Run time 3 hours 29 min 45 sec
CPU time 3 hours 25 min 36 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 5,444.63 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 455.41 MB
Peak swap size 6.39 GB
Peak disk usage 2.90 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
09:34:34 (21476): wrapper (7.9.26016): starting
09:34:34 (21476): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A39_A30_0.pdb
QB_A39_A30_0.xml
QB_A39_A30.inpcrd
QB_A39_A30_input.yaml
QB_A39_A30.pdb
QB_A39_A30.prmtop
QB_A39_A30_sys.xml
run.bat
run.sh
09:34:35 (21476): Library/usr/bin/tar.exe exited; CPU time 0.015625
09:34:35 (21476): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\4\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\4\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
13:03:13 (21476): C:/Windows/system32/cmd.exe exited; CPU time 12336.734375
13:03:13 (21476): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 247251257 bytes.
Dumping objects ->
{3835199} normal block at 0x0000026F3FA0CB20, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835188} normal block at 0x0000026F3FA0CC70, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835177} normal block at 0x0000026F3FA0C8F0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835166} normal block at 0x0000026F3DEA4F00, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835155} normal block at 0x0000026F3DEA4D40, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835124} normal block at 0x0000026F3FA5A580, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835111} normal block at 0x0000026F3DE9DE10, 8 bytes long.
 Data: <  3>o   > 00 00 33 3E 6F 02 00 00 
{3833959} normal block at 0x0000026F3DE9D6E0, 8 bytes long.
 Data: < &#235;&#247;=o   > 80 EB F7 3D 6F 02 00 00 
..\zip\boinc_zip.cpp(122) : {311} normal block at 0x0000026F3DE916A0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000026F3DE91EB0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{295} normal block at 0x0000026F3DEA5A60, 16 bytes long.
 Data: <xj&#234;=o           > 78 6A EA 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000026F3DEA6280, 16 bytes long.
 Data: <Pj&#234;=o           > 50 6A EA 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000026F3DE9FCF0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{292} normal block at 0x0000026F3DEA6230, 16 bytes long.
 Data: <(j&#234;=o           > 28 6A EA 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000026F3DEA60F0, 16 bytes long.
 Data: < j&#234;=o           > 00 6A EA 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000026F3DEA6050, 16 bytes long.
 Data: <&#216;i&#234;=o           > D8 69 EA 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000026F3DEA6000, 16 bytes long.
 Data: <&#176;i&#234;=o           > B0 69 EA 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000026F3DEA4F70, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{287} normal block at 0x0000026F3DEA5880, 16 bytes long.
 Data: < &#244;&#232;=o           > 08 F4 E8 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000026F3DE9FC90, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{285} normal block at 0x0000026F3DEA5AB0, 16 bytes long.
 Data: <&#224;&#243;&#232;=o           > E0 F3 E8 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000026F3DEA5BF0, 16 bytes long.
 Data: <&#184;&#243;&#232;=o           > B8 F3 E8 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000026F3DEA6190, 16 bytes long.
 Data: < &#243;&#232;=o           > 90 F3 E8 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000026F3DEA5F10, 16 bytes long.
 Data: <h&#243;&#232;=o           > 68 F3 E8 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000026F3DEA6410, 16 bytes long.
 Data: <@&#243;&#232;=o           > 40 F3 E8 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000026F3DEA5EC0, 16 bytes long.
 Data: < &#243;&#232;=o           > 18 F3 E8 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000026F3DE9FF30, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{277} normal block at 0x0000026F3DEA6320, 16 bytes long.
 Data: <&#240;&#242;&#232;=o           > F0 F2 E8 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000026F3DE8F2F0, 320 bytes long.
 Data: < c&#234;=o   0&#255;&#233;=o   > 20 63 EA 3D 6F 02 00 00 30 FF E9 3D 6F 02 00 00 
{275} normal block at 0x0000026F3DEA5FB0, 16 bytes long.
 Data: < i&#234;=o           > 90 69 EA 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000026F3DEA5F60, 16 bytes long.
 Data: <hi&#234;=o           > 68 69 EA 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000026F3DEA03B0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{272} normal block at 0x0000026F3DEA60A0, 16 bytes long.
 Data: <@i&#234;=o           > 40 69 EA 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000026F3DE9FB10, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{270} normal block at 0x0000026F3DEA6690, 16 bytes long.
 Data: < h&#234;=o           > 88 68 EA 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000026F3DEA5C40, 16 bytes long.
 Data: <`h&#234;=o           > 60 68 EA 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000026F3DEA5E70, 16 bytes long.
 Data: <8h&#234;=o           > 38 68 EA 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000026F3DEA5CE0, 16 bytes long.
 Data: < h&#234;=o           > 10 68 EA 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000026F3DEA63C0, 16 bytes long.
 Data: <&#232;g&#234;=o           > E8 67 EA 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000026F3DEA61E0, 16 bytes long.
 Data: <&#192;g&#234;=o           > C0 67 EA 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000026F3DEA6640, 16 bytes long.
 Data: <&#176;M&#234;=o           > B0 4D EA 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000026F3DEA4DB0, 40 bytes long.
 Data: <@f&#234;=o    &#165;&#165;?o   > 40 66 EA 3D 6F 02 00 00 80 A5 A5 3F 6F 02 00 00 
{261} normal block at 0x0000026F3DEA6460, 16 bytes long.
 Data: <&#160;g&#234;=o           > A0 67 EA 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000026F3DEA5DD0, 16 bytes long.
 Data: <xg&#234;=o           > 78 67 EA 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000026F3DE9F870, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{258} normal block at 0x0000026F3DEA65F0, 16 bytes long.
 Data: <Pg&#234;=o           > 50 67 EA 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x0000026F3DEA6750, 992 bytes long.
 Data: <&#240;e&#234;=o   p&#248;&#233;=o   > F0 65 EA 3D 6F 02 00 00 70 F8 E9 3D 6F 02 00 00 
{93} normal block at 0x0000026F3DE9FBD0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{92} normal block at 0x0000026F3DE9DC80, 16 bytes long.
 Data: <&#240;K&#234;=o           > F0 4B EA 3D 6F 02 00 00 00 00 00 00 00 00 00 00 
{91} normal block at 0x0000026F3DEA4BF0, 40 bytes long.
 Data: < &#220;&#233;=o   &#208;&#251;&#233;=o   > 80 DC E9 3D 6F 02 00 00 D0 FB E9 3D 6F 02 00 00 
{70} normal block at 0x0000026F3DE9D500, 16 bytes long.
 Data: < &#234;s&#149;&#247;           > 80 EA 73 95 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000026F3DE9DB40, 16 bytes long.
 Data: <@&#233;s&#149;&#247;           > 40 E9 73 95 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000026F3DE9E040, 16 bytes long.
 Data: <&#248;Wp&#149;&#247;           > F8 57 70 95 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000026F3DE9DC30, 16 bytes long.
 Data: <&#216;Wp&#149;&#247;           > D8 57 70 95 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000026F3DE9D960, 16 bytes long.
 Data: <P p&#149;&#247;           > 50 04 70 95 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000026F3DE9D4B0, 16 bytes long.
 Data: <0 p&#149;&#247;           > 30 04 70 95 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000026F3DE9DAA0, 16 bytes long.
 Data: <&#224; p&#149;&#247;           > E0 02 70 95 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000026F3DE9DAF0, 16 bytes long.
 Data: <  p&#149;&#247;           > 10 04 70 95 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000026F3DE9D280, 16 bytes long.
 Data: <p p&#149;&#247;           > 70 04 70 95 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000026F3DE9D410, 16 bytes long.
 Data: < &#192;n&#149;&#247;           > 18 C0 6E 95 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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