Task 38622788

Name p38_2_A08_A20_r0_3-QUICO_ATM_OpenFF_NAGL_p38_2-5-6-RND2104_0
Workunit 31573497
Created 20 Apr 2026, 23:27:44 UTC
Sent 20 Apr 2026, 23:27:53 UTC
Report deadline 25 Apr 2026, 23:27:53 UTC
Received 22 Apr 2026, 6:49:51 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 610949
Run time 12 hours 35 min 7 sec
CPU time 5 hours 39 min 37 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 20,322.95 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 717.91 MB
Peak swap size 9.93 GB
Peak disk usage 3.08 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:11:36 (37548): wrapper (7.9.26016): starting
03:11:36 (37548): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A08_A20_0.pdb
QB_A08_A20_0.xml
QB_A08_A20.inpcrd
QB_A08_A20_input.yaml
QB_A08_A20.pdb
QB_A08_A20.prmtop
QB_A08_A20_sys.xml
run.bat
run.sh
03:11:37 (37548): Library/usr/bin/tar.exe exited; CPU time 0.015625
03:11:37 (37548): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
15:45:48 (37548): C:/Windows/system32/cmd.exe exited; CPU time 20377.921875
15:45:48 (37548): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 902804983 bytes.
Dumping objects ->
{3835367} normal block at 0x000001DECFC4F6E0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835356} normal block at 0x000001DECFC4ED40, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835345} normal block at 0x000001DECFC4EDB0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835334} normal block at 0x000001DECFC4F280, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835323} normal block at 0x000001DECFC4F670, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835292} normal block at 0x000001DED3603B80, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835279} normal block at 0x000001DECFC47260, 8 bytes long.
 Data: <  p&#211;&#222;   > 00 00 70 D3 DE 01 00 00 
{3834065} normal block at 0x000001DECFC46590, 8 bytes long.
 Data: <P &#209;&#207;&#222;   > 50 EB D1 CF DE 01 00 00 
..\zip\boinc_zip.cpp(122) : {314} normal block at 0x000001DECFC31630, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x000001DECFC32630, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{298} normal block at 0x000001DECFC4C5D0, 16 bytes long.
 Data: <&#184;&#183;&#196;&#207;&#222;           > B8 B7 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001DECFC4C1C0, 16 bytes long.
 Data: < &#183;&#196;&#207;&#222;           > 90 B7 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000001DECFC44210, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{295} normal block at 0x000001DECFC4C080, 16 bytes long.
 Data: <h&#183;&#196;&#207;&#222;           > 68 B7 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001DECFC4BBD0, 16 bytes long.
 Data: <@&#183;&#196;&#207;&#222;           > 40 B7 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001DECFC4BD60, 16 bytes long.
 Data: < &#183;&#196;&#207;&#222;           > 18 B7 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001DECFC4C530, 16 bytes long.
 Data: < &#182;&#196;&#207;&#222;           > F0 B6 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001DECFC46190, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{290} normal block at 0x000001DECFC4C120, 16 bytes long.
 Data: <&#200;&#177;&#196;&#207;&#222;           > C8 B1 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001DECFC43E50, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{288} normal block at 0x000001DECFC4BF40, 16 bytes long.
 Data: < &#177;&#196;&#207;&#222;           > A0 B1 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001DECFC4C4E0, 16 bytes long.
 Data: <x&#177;&#196;&#207;&#222;           > 78 B1 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001DECFC4C580, 16 bytes long.
 Data: <P&#177;&#196;&#207;&#222;           > 50 B1 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001DECFC4BD10, 16 bytes long.
 Data: <(&#177;&#196;&#207;&#222;           > 28 B1 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001DECFC4C300, 16 bytes long.
 Data: < &#177;&#196;&#207;&#222;           > 00 B1 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001DECFC4C170, 16 bytes long.
 Data: <&#216;&#176;&#196;&#207;&#222;           > D8 B0 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001DECFC43DF0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{280} normal block at 0x000001DECFC4BB30, 16 bytes long.
 Data: <&#176;&#176;&#196;&#207;&#222;           > B0 B0 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001DECFC4B0B0, 320 bytes long.
 Data: <0&#187;&#196;&#207;&#222;    =&#196;&#207;&#222;   > 30 BB C4 CF DE 01 00 00 F0 3D C4 CF DE 01 00 00 
{278} normal block at 0x000001DECFC4BC20, 16 bytes long.
 Data: <&#208;&#182;&#196;&#207;&#222;           > D0 B6 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001DECFC4BEF0, 16 bytes long.
 Data: <&#168;&#182;&#196;&#207;&#222;           > A8 B6 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001DECFC44A50, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{275} normal block at 0x000001DECFC4C0D0, 16 bytes long.
 Data: < &#182;&#196;&#207;&#222;           > 80 B6 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001DECFC44810, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{273} normal block at 0x000001DECFC4BB80, 16 bytes long.
 Data: <&#200;&#181;&#196;&#207;&#222;           > C8 B5 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001DECFC4C670, 16 bytes long.
 Data: < &#181;&#196;&#207;&#222;           > A0 B5 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001DECFC4C030, 16 bytes long.
 Data: <x&#181;&#196;&#207;&#222;           > 78 B5 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001DECFC47490, 16 bytes long.
 Data: <P&#181;&#196;&#207;&#222;           > 50 B5 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001DECFC46630, 16 bytes long.
 Data: <(&#181;&#196;&#207;&#222;           > 28 B5 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001DECFC46AE0, 16 bytes long.
 Data: < &#181;&#196;&#207;&#222;           > 00 B5 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001DECFC46540, 16 bytes long.
 Data: < a&#196;&#207;&#222;           > 20 61 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001DECFC46120, 40 bytes long.
 Data: <@e&#196;&#207;&#222;    ;`&#211;&#222;   > 40 65 C4 CF DE 01 00 00 80 3B 60 D3 DE 01 00 00 
{264} normal block at 0x000001DECFC46720, 16 bytes long.
 Data: < &#180;&#196;&#207;&#222;           > E0 B4 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001DECFC47300, 16 bytes long.
 Data: <&#184;&#180;&#196;&#207;&#222;           > B8 B4 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001DECFC447B0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{261} normal block at 0x000001DECFC47210, 16 bytes long.
 Data: < &#180;&#196;&#207;&#222;           > 90 B4 C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001DECFC4B490, 992 bytes long.
 Data: < r&#196;&#207;&#222;   &#176;G&#196;&#207;&#222;   > 10 72 C4 CF DE 01 00 00 B0 47 C4 CF DE 01 00 00 
{96} normal block at 0x000001DECFC443F0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{95} normal block at 0x000001DECFC472B0, 16 bytes long.
 Data: < ^&#196;&#207;&#222;           > F0 5E C4 CF DE 01 00 00 00 00 00 00 00 00 00 00 
{94} normal block at 0x000001DECFC45EF0, 40 bytes long.
 Data: <&#176;r&#196;&#207;&#222;    C&#196;&#207;&#222;   > B0 72 C4 CF DE 01 00 00 F0 43 C4 CF DE 01 00 00 
{71} normal block at 0x000001DECFC46B30, 16 bytes long.
 Data: <  K`            > 80 EA 4B 60 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001DECFC46C70, 16 bytes long.
 Data: <@ K`            > 40 E9 4B 60 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001DECFC46DB0, 16 bytes long.
 Data: < WH`            > F8 57 48 60 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001DECFC468B0, 16 bytes long.
 Data: <&#216;WH`            > D8 57 48 60 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001DECFC46D60, 16 bytes long.
 Data: <P H`            > 50 04 48 60 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001DECFC46900, 16 bytes long.
 Data: <0 H`            > 30 04 48 60 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001DECFC47120, 16 bytes long.
 Data: <  H`            > E0 02 48 60 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001DECFC467C0, 16 bytes long.
 Data: <  H`            > 10 04 48 60 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001DECFC47030, 16 bytes long.
 Data: <p H`            > 70 04 48 60 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001DECFC46EA0, 16 bytes long.
 Data: < &#192;F`            > 18 C0 46 60 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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