Task 38622645

Name HIF2A_2_A41_A38_r0_3-QUICO_ATM_GAFF2_NAGL_hif2a_2-3-6-RND5251_0
Workunit 31573370
Created 20 Apr 2026, 20:47:34 UTC
Sent 20 Apr 2026, 20:47:40 UTC
Report deadline 25 Apr 2026, 20:47:40 UTC
Received 21 Apr 2026, 2:25:40 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 593616
Run time 2 hours 1 min 12 sec
CPU time 2 hours 1 min 12 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 29,505.83 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 464.14 MB
Peak swap size 6.51 GB
Peak disk usage 2.90 GB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
09:24:11 (42624): wrapper (7.9.26016): starting
09:24:11 (42624): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A41_A38_0.pdb
QB_A41_A38_0.xml
QB_A41_A38.inpcrd
QB_A41_A38_input.yaml
QB_A41_A38.pdb
QB_A41_A38.prmtop
QB_A41_A38_sys.xml
run.bat
run.sh
09:24:12 (42624): Library/usr/bin/tar.exe exited; CPU time 0.015625
09:24:12 (42624): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
'DOSKEY' &#130;&#205;&#129;A&#147;&#224;&#149;&#148;&#131;R&#131;}&#131;&#147;&#131;h&#130;&#220;&#130;&#189;&#130;&#205;&#138;O&#149;&#148;&#131;R&#131;}&#131;&#147;&#131;h&#129;A
&#145;&#128;&#141;&#236;&#137;&#194;&#148;\&#130;&#200;&#131;v&#131;&#141;&#131;O&#131;&#137;&#131;&#128;&#130;&#220;&#130;&#189;&#130;&#205;&#131;o&#131;b&#131;` &#131;t&#131;@&#131;C&#131;&#139;&#130;&#198;&#130;&#181;&#130;&#196;&#148;F&#142;&#175;&#130;&#179;&#130;&#234;&#130;&#196;&#130;&#162;&#130;&#220;&#130;&#185;&#130;&#241;&#129;B
  WARNING: The script pyaml.exe is installed in 'D:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'D:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
11:25:12 (42624): C:/Windows/system32/cmd.exe exited; CPU time 7272.671875
11:25:12 (42624): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 114976093 bytes.
Dumping objects ->
{3835325} normal block at 0x000001FF33AD1560, 48 bytes long.
 Data: <PATH=D:\ProgramD> 50 41 54 48 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835314} normal block at 0x000001FF33AD12C0, 48 bytes long.
 Data: <HOME=D:\ProgramD> 48 4F 4D 45 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835303} normal block at 0x000001FF33AD0A70, 48 bytes long.
 Data: <TMP=D:\ProgramDa> 54 4D 50 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835292} normal block at 0x000001FF33AD0F40, 48 bytes long.
 Data: <TEMP=D:\ProgramD> 54 45 4D 50 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835281} normal block at 0x000001FF33AD14F0, 48 bytes long.
 Data: <TMPDIR=D:\Progra> 54 4D 50 44 49 52 3D 44 3A 5C 50 72 6F 67 72 61 
{3835250} normal block at 0x000001FF33BC6B80, 64 bytes long.
 Data: <PATH=D:\ProgramD> 50 41 54 48 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835237} normal block at 0x000001FF31B3EEE0, 8 bytes long.
 Data: <  &#177;1    > 00 00 B1 31 FF 01 00 00 
{3834073} normal block at 0x000001FF31B3EDF0, 8 bytes long.
 Data: < &#221;&#178;1    > 90 DD B2 31 FF 01 00 00 
..\zip\boinc_zip.cpp(122) : {316} normal block at 0x000001FF31B315A0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{301} normal block at 0x000001FF31B32360, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{300} normal block at 0x000001FF31B47C20, 16 bytes long.
 Data: <x &#180;1            > 78 83 B4 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x000001FF31B47BD0, 16 bytes long.
 Data: <P &#180;1            > 50 83 B4 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000001FF31B40E00, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{297} normal block at 0x000001FF31B47CC0, 16 bytes long.
 Data: <( &#180;1            > 28 83 B4 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000001FF31B47360, 16 bytes long.
 Data: <  &#180;1            > 00 83 B4 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001FF31B47B80, 16 bytes long.
 Data: <&#216; &#180;1            > D8 82 B4 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001FF31B474A0, 16 bytes long.
 Data: <&#176; &#180;1            > B0 82 B4 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001FF31B43200, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{292} normal block at 0x000001FF31B47FE0, 16 bytes long.
 Data: <( &#179;1            > 28 0E B3 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001FF31B40F20, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{290} normal block at 0x000001FF31B47A90, 16 bytes long.
 Data: <  &#179;1            > 00 0E B3 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001FF31B47AE0, 16 bytes long.
 Data: <&#216; &#179;1            > D8 0D B3 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001FF31B47B30, 16 bytes long.
 Data: <&#176; &#179;1            > B0 0D B3 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001FF31B47770, 16 bytes long.
 Data: <  &#179;1            > 88 0D B3 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001FF31B479A0, 16 bytes long.
 Data: <` &#179;1            > 60 0D B3 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001FF31B47A40, 16 bytes long.
 Data: <8 &#179;1            > 38 0D B3 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001FF31B41760, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{282} normal block at 0x000001FF31B47950, 16 bytes long.
 Data: <  &#179;1            > 10 0D B3 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001FF31B30D10, 320 bytes long.
 Data: <Py&#180;1    ` &#180;1    > 50 79 B4 31 FF 01 00 00 60 17 B4 31 FF 01 00 00 
{280} normal block at 0x000001FF31B47540, 16 bytes long.
 Data: <  &#180;1            > 90 82 B4 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001FF31B47D60, 16 bytes long.
 Data: <h &#180;1            > 68 82 B4 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001FF31B41820, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{277} normal block at 0x000001FF31B47270, 16 bytes long.
 Data: <@ &#180;1            > 40 82 B4 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001FF31B414C0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{275} normal block at 0x000001FF31B47900, 16 bytes long.
 Data: <  &#180;1            > 88 81 B4 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001FF31B47450, 16 bytes long.
 Data: <` &#180;1            > 60 81 B4 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001FF31B47F90, 16 bytes long.
 Data: <8 &#180;1            > 38 81 B4 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001FF31B472C0, 16 bytes long.
 Data: <  &#180;1            > 10 81 B4 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001FF31B47400, 16 bytes long.
 Data: <  &#180;1            > E8 80 B4 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001FF31B476D0, 16 bytes long.
 Data: <&#192; &#180;1            > C0 80 B4 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001FF31B47810, 16 bytes long.
 Data: <@0&#180;1            > 40 30 B4 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001FF31B43040, 40 bytes long.
 Data: < x&#180;1     k&#188;3    > 10 78 B4 31 FF 01 00 00 80 6B BC 33 FF 01 00 00 
{266} normal block at 0x000001FF31B475E0, 16 bytes long.
 Data: <  &#180;1            > A0 80 B4 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001FF31B47720, 16 bytes long.
 Data: <x &#180;1            > 78 80 B4 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001FF31B41400, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{263} normal block at 0x000001FF31B47E00, 16 bytes long.
 Data: <P &#180;1            > 50 80 B4 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001FF31B48050, 992 bytes long.
 Data: < ~&#180;1      &#180;1    > 00 7E B4 31 FF 01 00 00 00 14 B4 31 FF 01 00 00 
{98} normal block at 0x000001FF31B41580, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{97} normal block at 0x000001FF31B3F6B0, 16 bytes long.
 Data: < 1&#180;1            > 90 31 B4 31 FF 01 00 00 00 00 00 00 00 00 00 00 
{96} normal block at 0x000001FF31B43190, 40 bytes long.
 Data: <&#176; &#179;1      &#180;1    > B0 F6 B3 31 FF 01 00 00 80 15 B4 31 FF 01 00 00 
{73} normal block at 0x000001FF31B3ECB0, 16 bytes long.
 Data: <   j            > 80 EA EC 6A F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x000001FF31B3EE90, 16 bytes long.
 Data: <@  j            > 40 E9 EC 6A F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000001FF31B3ED00, 16 bytes long.
 Data: < W j            > F8 57 E9 6A F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001FF31B3F200, 16 bytes long.
 Data: <&#216;W j            > D8 57 E9 6A F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001FF31B3EA30, 16 bytes long.
 Data: <P  j            > 50 04 E9 6A F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001FF31B3EDA0, 16 bytes long.
 Data: <0  j            > 30 04 E9 6A F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001FF31B3F480, 16 bytes long.
 Data: <   j            > E0 02 E9 6A F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001FF31B3EE40, 16 bytes long.
 Data: <   j            > 10 04 E9 6A F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001FF31B3E9E0, 16 bytes long.
 Data: <p  j            > 70 04 E9 6A F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001FF31B3F2A0, 16 bytes long.
 Data: < &#192; j            > 18 C0 E7 6A F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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