Task 38622414

Name HIF2A_2_A02_A17_r0_5-QUICO_ATM_GAFF2_NAGL_hif2a_2-5-6-RND8303_1
Workunit 31573178
Created 20 Apr 2026, 17:47:31 UTC
Sent 20 Apr 2026, 17:47:36 UTC
Report deadline 25 Apr 2026, 17:47:36 UTC
Received 22 Apr 2026, 0:26:26 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 608298
Run time 5 hours 8 min 58 sec
CPU time 5 hours 8 min 58 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 29,507.55 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 442.30 MB
Peak swap size 9.54 GB
Peak disk usage 3.71 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
22:18:13 (25512): wrapper (7.9.26016): starting
22:18:13 (25512): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A02_A17_0.pdb
QB_A02_A17_0.xml
QB_A02_A17.inpcrd
QB_A02_A17_input.yaml
QB_A02_A17.pdb
QB_A02_A17.prmtop
QB_A02_A17_sys.xml
run.bat
run.sh
22:18:15 (25512): Library/usr/bin/tar.exe exited; CPU time 0.031250
22:18:15 (25512): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\6\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\6\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
03:25:38 (25512): C:/Windows/system32/cmd.exe exited; CPU time 18538.281250
03:25:38 (25512): called boinc_finish(0)
0 bytes in 0 Free Blocks.
766 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 311379215 bytes.
Dumping objects ->
{3835593} normal block at 0x00000162B9898230, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835582} normal block at 0x00000162B9897B30, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835571} normal block at 0x00000162B9897AC0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835560} normal block at 0x00000162B9897DD0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835549} normal block at 0x00000162B7A07B10, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835518} normal block at 0x00000162B980D8E0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835507} normal block at 0x00000162B79F50B0, 255 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835504} normal block at 0x00000162B79FE710, 8 bytes long.
 Data: <  &#155;&#183;b   > 00 00 9B B7 62 01 00 00 
{3834720} normal block at 0x00000162B79F5470, 255 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833963} normal block at 0x00000162B79FDF90, 8 bytes long.
 Data: <p&#231;q b   > 70 E7 71 B9 62 01 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x00000162B79F51F0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x00000162B79F56C0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{297} normal block at 0x00000162B7A09980, 16 bytes long.
 Data: < &#164;&#160;&#183;b           > 98 A4 A0 B7 62 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x00000162B7A09930, 16 bytes long.
 Data: <p&#164;&#160;&#183;b           > 70 A4 A0 B7 62 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x00000162B7A038E0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{294} normal block at 0x00000162B7A09DE0, 16 bytes long.
 Data: <H&#164;&#160;&#183;b           > 48 A4 A0 B7 62 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x00000162B7A09570, 16 bytes long.
 Data: < &#164;&#160;&#183;b           > 20 A4 A0 B7 62 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000162B7A09F70, 16 bytes long.
 Data: <&#248;&#163;&#160;&#183;b           > F8 A3 A0 B7 62 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000162B7A09480, 16 bytes long.
 Data: <&#208;&#163;&#160;&#183;b           > D0 A3 A0 B7 62 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000162B7A07C60, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{289} normal block at 0x00000162B7A093E0, 16 bytes long.
 Data: < 3&#159;&#183;b           > 18 33 9F B7 62 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000162B7A02F20, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{287} normal block at 0x00000162B7A09390, 16 bytes long.
 Data: <&#240;2&#159;&#183;b           > F0 32 9F B7 62 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000162B7A097A0, 16 bytes long.
 Data: <&#200;2&#159;&#183;b           > C8 32 9F B7 62 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000162B7A09B60, 16 bytes long.
 Data: <&#160;2&#159;&#183;b           > A0 32 9F B7 62 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000162B7A09610, 16 bytes long.
 Data: <x2&#159;&#183;b           > 78 32 9F B7 62 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000162B7A09ED0, 16 bytes long.
 Data: <P2&#159;&#183;b           > 50 32 9F B7 62 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000162B7A09250, 16 bytes long.
 Data: <(2&#159;&#183;b           > 28 32 9F B7 62 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000162B7A02EC0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{279} normal block at 0x00000162B7A092F0, 16 bytes long.
 Data: < 2&#159;&#183;b           > 00 32 9F B7 62 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000162B79F3200, 320 bytes long.
 Data: <&#240;&#146;&#160;&#183;b   &#192;.&#160;&#183;b   > F0 92 A0 B7 62 01 00 00 C0 2E A0 B7 62 01 00 00 
{277} normal block at 0x00000162B7A0A010, 16 bytes long.
 Data: <&#176;&#163;&#160;&#183;b           > B0 A3 A0 B7 62 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000162B7A092A0, 16 bytes long.
 Data: < &#163;&#160;&#183;b           > 88 A3 A0 B7 62 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000162B7A03340, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{274} normal block at 0x00000162B7A09430, 16 bytes long.
 Data: <`&#163;&#160;&#183;b           > 60 A3 A0 B7 62 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000162B7A03820, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{272} normal block at 0x00000162B7A098E0, 16 bytes long.
 Data: <&#168;&#162;&#160;&#183;b           > A8 A2 A0 B7 62 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000162B7A09AC0, 16 bytes long.
 Data: <&#128;&#162;&#160;&#183;b           > 80 A2 A0 B7 62 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000162B7A09C00, 16 bytes long.
 Data: <X&#162;&#160;&#183;b           > 58 A2 A0 B7 62 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000162B7A09890, 16 bytes long.
 Data: <0&#162;&#160;&#183;b           > 30 A2 A0 B7 62 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000162B7A09C50, 16 bytes long.
 Data: < &#162;&#160;&#183;b           > 08 A2 A0 B7 62 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000162B7A09520, 16 bytes long.
 Data: <&#224;&#161;&#160;&#183;b           > E0 A1 A0 B7 62 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000162B7A094D0, 16 bytes long.
 Data: <`u&#160;&#183;b           > 60 75 A0 B7 62 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000162B7A07560, 40 bytes long.
 Data: <&#208;&#148;&#160;&#183;b   &#224;&#216;&#128; b   > D0 94 A0 B7 62 01 00 00 E0 D8 80 B9 62 01 00 00 
{263} normal block at 0x00000162B7A09700, 16 bytes long.
 Data: <&#192;&#161;&#160;&#183;b           > C0 A1 A0 B7 62 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000162B7A09B10, 16 bytes long.
 Data: < &#161;&#160;&#183;b           > 98 A1 A0 B7 62 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000162B7A03100, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{260} normal block at 0x00000162B7A097F0, 16 bytes long.
 Data: <p&#161;&#160;&#183;b           > 70 A1 A0 B7 62 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x00000162B7A0A170, 992 bytes long.
 Data: <&#240;&#151;&#160;&#183;b    1&#160;&#183;b   > F0 97 A0 B7 62 01 00 00 00 31 A0 B7 62 01 00 00 
{95} normal block at 0x00000162B7A02E60, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{94} normal block at 0x00000162B79FE530, 16 bytes long.
 Data: <&#128;{&#160;&#183;b           > 80 7B A0 B7 62 01 00 00 00 00 00 00 00 00 00 00 
{93} normal block at 0x00000162B7A07B80, 40 bytes long.
 Data: <0&#229;&#159;&#183;b   `.&#160;&#183;b   > 30 E5 9F B7 62 01 00 00 60 2E A0 B7 62 01 00 00 
{72} normal block at 0x00000162B79FE300, 16 bytes long.
 Data: <&#128;&#234;&#227; &#247;           > 80 EA E3 11 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x00000162B79FDC20, 16 bytes long.
 Data: <@&#233;&#227; &#247;           > 40 E9 E3 11 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x00000162B79FDFE0, 16 bytes long.
 Data: <&#248;W&#224; &#247;           > F8 57 E0 11 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x00000162B79FE0D0, 16 bytes long.
 Data: <&#216;W&#224; &#247;           > D8 57 E0 11 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000162B79FDEF0, 16 bytes long.
 Data: <P &#224; &#247;           > 50 04 E0 11 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000162B79FE4E0, 16 bytes long.
 Data: <0 &#224; &#247;           > 30 04 E0 11 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000162B79FDBD0, 16 bytes long.
 Data: <&#224; &#224; &#247;           > E0 02 E0 11 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000162B79FE1C0, 16 bytes long.
 Data: <  &#224; &#247;           > 10 04 E0 11 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000162B79FE440, 16 bytes long.
 Data: <p &#224; &#247;           > 70 04 E0 11 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000162B79FE3F0, 16 bytes long.
 Data: < &#192;&#222; &#247;           > 18 C0 DE 11 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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