Task 38620725

Name HIF2A_2_A28_A34_r0_1-QUICO_ATM_GAFF2_NAGL_hif2a_2-4-6-RND6086_0
Workunit 31571845
Created 19 Apr 2026, 11:37:48 UTC
Sent 19 Apr 2026, 11:37:54 UTC
Report deadline 24 Apr 2026, 11:37:54 UTC
Received 20 Apr 2026, 10:55:23 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 525469
Run time 3 hours 33 min 31 sec
CPU time 3 hours 29 min 36 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 8,882.16 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 444.89 MB
Peak swap size 6.47 GB
Peak disk usage 2.90 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
14:46:46 (33696): wrapper (7.9.26016): starting
14:46:46 (33696): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A28_A34_0.pdb
QB_A28_A34_0.xml
QB_A28_A34.inpcrd
QB_A28_A34_input.yaml
QB_A28_A34.pdb
QB_A28_A34.prmtop
QB_A28_A34_sys.xml
run.bat
run.sh
14:46:47 (33696): Library/usr/bin/tar.exe exited; CPU time 0.000000
14:46:47 (33696): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
18:19:09 (33696): C:/Windows/system32/cmd.exe exited; CPU time 12576.921875
18:19:09 (33696): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 244311113 bytes.
Dumping objects ->
{3835452} normal block at 0x0000023E34B35650, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835441} normal block at 0x0000023E34B35570, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835430} normal block at 0x0000023E34B35500, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835419} normal block at 0x0000023E34B356C0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835408} normal block at 0x0000023E34B350A0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835377} normal block at 0x0000023E36854930, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835366} normal block at 0x0000023E3686F660, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835363} normal block at 0x0000023E34B2E320, 8 bytes long.
 Data: <  q6>   > 00 00 71 36 3E 02 00 00 
{3834643} normal block at 0x0000023E3686F240, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833951} normal block at 0x0000023E34B2D880, 8 bytes long.
 Data: <0Q&#139;6>   > 30 51 8B 36 3E 02 00 00 
..\zip\boinc_zip.cpp(122) : {307} normal block at 0x0000023E34B20D20, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000023E34B21F30, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{291} normal block at 0x0000023E34B36BB0, 16 bytes long.
 Data: < o&#179;4>           > 98 6F B3 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000023E34B361B0, 16 bytes long.
 Data: <po&#179;4>           > 70 6F B3 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000023E34B30120, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{288} normal block at 0x0000023E34B362F0, 16 bytes long.
 Data: <Ho&#179;4>           > 48 6F B3 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000023E34B35D00, 16 bytes long.
 Data: < o&#179;4>           > 20 6F B3 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000023E34B360C0, 16 bytes long.
 Data: <&#248;n&#179;4>           > F8 6E B3 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000023E34B36AC0, 16 bytes long.
 Data: <&#208;n&#179;4>           > D0 6E B3 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000023E34B35490, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{283} normal block at 0x0000023E34B36070, 16 bytes long.
 Data: < &#244;&#177;4>           > 88 F4 B1 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000023E34B2FCA0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{281} normal block at 0x0000023E34B368E0, 16 bytes long.
 Data: <`&#244;&#177;4>           > 60 F4 B1 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000023E34B36570, 16 bytes long.
 Data: <8&#244;&#177;4>           > 38 F4 B1 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000023E34B35E90, 16 bytes long.
 Data: < &#244;&#177;4>           > 10 F4 B1 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000023E34B36A20, 16 bytes long.
 Data: <&#232;&#243;&#177;4>           > E8 F3 B1 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000023E34B369D0, 16 bytes long.
 Data: <&#192;&#243;&#177;4>           > C0 F3 B1 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000023E34B35DF0, 16 bytes long.
 Data: < &#243;&#177;4>           > 98 F3 B1 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000023E34B30000, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{273} normal block at 0x0000023E34B36930, 16 bytes long.
 Data: <p&#243;&#177;4>           > 70 F3 B1 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000023E34B1F370, 320 bytes long.
 Data: <0i&#179;4>     &#179;4>   > 30 69 B3 34 3E 02 00 00 00 00 B3 34 3E 02 00 00 
{271} normal block at 0x0000023E34B36430, 16 bytes long.
 Data: <&#176;n&#179;4>           > B0 6E B3 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000023E34B36B10, 16 bytes long.
 Data: < n&#179;4>           > 88 6E B3 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000023E34B2FFA0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{268} normal block at 0x0000023E34B35EE0, 16 bytes long.
 Data: <`n&#179;4>           > 60 6E B3 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000023E34B2FB80, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{266} normal block at 0x0000023E34B36C00, 16 bytes long.
 Data: <&#168;m&#179;4>           > A8 6D B3 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000023E34B35DA0, 16 bytes long.
 Data: < m&#179;4>           > 80 6D B3 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000023E34B36110, 16 bytes long.
 Data: <Xm&#179;4>           > 58 6D B3 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000023E34B36020, 16 bytes long.
 Data: <0m&#179;4>           > 30 6D B3 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000023E34B35FD0, 16 bytes long.
 Data: < m&#179;4>           > 08 6D B3 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000023E34B36160, 16 bytes long.
 Data: <&#224;l&#179;4>           > E0 6C B3 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000023E34B367A0, 16 bytes long.
 Data: <@S&#179;4>           > 40 53 B3 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000023E34B35340, 40 bytes long.
 Data: <&#160;g&#179;4>   0I&#133;6>   > A0 67 B3 34 3E 02 00 00 30 49 85 36 3E 02 00 00 
{257} normal block at 0x0000023E34B36200, 16 bytes long.
 Data: <&#192;l&#179;4>           > C0 6C B3 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x0000023E34B36890, 16 bytes long.
 Data: < l&#179;4>           > 98 6C B3 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x0000023E34B2FB20, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{254} normal block at 0x0000023E34B36480, 16 bytes long.
 Data: <pl&#179;4>           > 70 6C B3 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x0000023E34B36C70, 992 bytes long.
 Data: < d&#179;4>    &#251;&#178;4>   > 80 64 B3 34 3E 02 00 00 20 FB B2 34 3E 02 00 00 
{89} normal block at 0x0000023E34B302A0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{88} normal block at 0x0000023E34B2DB00, 16 bytes long.
 Data: < &#225;&#177;4>           > 20 E1 B1 34 3E 02 00 00 00 00 00 00 00 00 00 00 
{87} normal block at 0x0000023E34B1E120, 40 bytes long.
 Data: < &#219;&#178;4>   &#160; &#179;4>   > 00 DB B2 34 3E 02 00 00 A0 02 B3 34 3E 02 00 00 
{66} normal block at 0x0000023E34B2E2D0, 16 bytes long.
 Data: < &#234;]g&#247;           > 80 EA 5D 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000023E34B2E280, 16 bytes long.
 Data: <@&#233;]g&#247;           > 40 E9 5D 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000023E34B2DE20, 16 bytes long.
 Data: <&#248;WZg&#247;           > F8 57 5A 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000023E34B2DD80, 16 bytes long.
 Data: <&#216;WZg&#247;           > D8 57 5A 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000023E34B2D8D0, 16 bytes long.
 Data: <P Zg&#247;           > 50 04 5A 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000023E34B2D4C0, 16 bytes long.
 Data: <0 Zg&#247;           > 30 04 5A 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000023E34B2E000, 16 bytes long.
 Data: <&#224; Zg&#247;           > E0 02 5A 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x0000023E34B2DA60, 16 bytes long.
 Data: <  Zg&#247;           > 10 04 5A 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x0000023E34B2D970, 16 bytes long.
 Data: <p Zg&#247;           > 70 04 5A 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x0000023E34B2D650, 16 bytes long.
 Data: < &#192;Xg&#247;           > 18 C0 58 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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