Task 38620700

Name hif2a_2_A29_A37_r0_4-QUICO_ATM_OpenFF_NAGL_hif2a_2-3-6-RND9326_0
Workunit 31571822
Created 19 Apr 2026, 11:21:31 UTC
Sent 19 Apr 2026, 11:21:33 UTC
Report deadline 24 Apr 2026, 11:21:33 UTC
Received 20 Apr 2026, 12:08:23 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 629115
Run time 3 hours 18 min 17 sec
CPU time 3 hours 2 min 1 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 12,744.41 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 459.27 MB
Peak swap size 1.98 GB
Peak disk usage 3.24 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
20:22:35 (3364): wrapper (7.9.26016): starting
20:22:35 (3364): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A29_A37_0.pdb
QB_A29_A37_0.xml
QB_A29_A37.inpcrd
QB_A29_A37_input.yaml
QB_A29_A37.pdb
QB_A29_A37.prmtop
QB_A29_A37_sys.xml
run.bat
run.sh
20:22:37 (3364): Library/usr/bin/tar.exe exited; CPU time 0.000000
20:22:37 (3364): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
21:01:49 (18256): wrapper (7.9.26016): starting
21:01:49 (18256): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
&#131;T&#131;u&#131;f&#131;B&#131;&#140;&#131;N&#131;g&#131;&#138;&#130;&#220;&#130;&#189;&#130;&#205;&#131;t&#131;@&#131;C&#131;&#139; C:\ProgramData\BOINC\slots\0\tmp &#130;&#205;&#138;&#249;&#130;&#201;&#145;&#182;&#141;&#221;&#130;&#181;&#130;&#220;&#130;&#183;&#129;B
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
00:19:02 (18256): C:/Windows/system32/cmd.exe exited; CPU time 10921.609375
00:19:02 (18256): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 172919882 bytes.
Dumping objects ->
{1789} normal block at 0x0000029205C25720, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1778} normal block at 0x0000029205C255D0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1767} normal block at 0x0000029205C258E0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{1756} normal block at 0x0000029205C25410, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1745} normal block at 0x0000029205C25790, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{1714} normal block at 0x0000029205C0E2D0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {1701} normal block at 0x0000029205C26450, 8 bytes long.
 Data: <        > 00 00 BD 05 92 02 00 00 
{310} normal block at 0x0000029205C26220, 8 bytes long.
 Data: < s      > F0 73 C2 05 92 02 00 00 
{301} normal block at 0x0000029205C125A0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{300} normal block at 0x0000029205C26AE0, 16 bytes long.
 Data: < r              > F8 72 C2 05 92 02 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x0000029205C26180, 16 bytes long.
 Data: < r              > D0 72 C2 05 92 02 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x0000029205C1FC10, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{297} normal block at 0x0000029205C26900, 16 bytes long.
 Data: < r              > A8 72 C2 05 92 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000029205C26B80, 16 bytes long.
 Data: < r              > 80 72 C2 05 92 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000029205C26B30, 16 bytes long.
 Data: <Xr              > 58 72 C2 05 92 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000029205C26860, 16 bytes long.
 Data: <0r              > 30 72 C2 05 92 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000029205C25870, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{292} normal block at 0x0000029205C264F0, 16 bytes long.
 Data: <                > C8 BC C0 05 92 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000029205C1FBB0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{290} normal block at 0x0000029205C25FF0, 16 bytes long.
 Data: <                > A0 BC C0 05 92 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000029205C26CC0, 16 bytes long.
 Data: <x               > 78 BC C0 05 92 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000029205C26400, 16 bytes long.
 Data: <P               > 50 BC C0 05 92 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000029205C26040, 16 bytes long.
 Data: <(               > 28 BC C0 05 92 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000029205C25FA0, 16 bytes long.
 Data: <                > 00 BC C0 05 92 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000029205C268B0, 16 bytes long.
 Data: <                > D8 BB C0 05 92 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000029205C20870, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{282} normal block at 0x0000029205C26310, 16 bytes long.
 Data: <                > B0 BB C0 05 92 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000029205C0BBB0, 320 bytes long.
 Data: < c      p       > 10 63 C2 05 92 02 00 00 70 08 C2 05 92 02 00 00 
{280} normal block at 0x0000029205C26D60, 16 bytes long.
 Data: < r              > 10 72 C2 05 92 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000029205C26A40, 16 bytes long.
 Data: < q              > E8 71 C2 05 92 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000029205C20210, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{277} normal block at 0x0000029205C262C0, 16 bytes long.
 Data: < q              > C0 71 C2 05 92 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000029205C20AB0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{275} normal block at 0x0000029205C25F50, 16 bytes long.
 Data: < q              > 08 71 C2 05 92 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000029205C26DB0, 16 bytes long.
 Data: < p              > E0 70 C2 05 92 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000029205C26590, 16 bytes long.
 Data: < p              > B8 70 C2 05 92 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000029205C269F0, 16 bytes long.
 Data: < p              > 90 70 C2 05 92 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000029205C26540, 16 bytes long.
 Data: <hp              > 68 70 C2 05 92 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000029205C267C0, 16 bytes long.
 Data: <@p              > 40 70 C2 05 92 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000029205C26810, 16 bytes long.
 Data: < X              > 00 58 C2 05 92 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000029205C25800, 40 bytes long.
 Data: < h              > 10 68 C2 05 92 02 00 00 D0 E2 C0 05 92 02 00 00 
{266} normal block at 0x0000029205C26770, 16 bytes long.
 Data: < p              > 20 70 C2 05 92 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000029205C26270, 16 bytes long.
 Data: < o              > F8 6F C2 05 92 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000029205C20990, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{263} normal block at 0x0000029205C25F00, 16 bytes long.
 Data: < o              > D0 6F C2 05 92 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000029205C26FD0, 992 bytes long.
 Data: < _              > 00 5F C2 05 92 02 00 00 90 09 C2 05 92 02 00 00 
{98} normal block at 0x0000029205C20810, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{97} normal block at 0x0000029205C1DC80, 16 bytes long.
 Data: < V              > B0 56 C2 05 92 02 00 00 00 00 00 00 00 00 00 00 
{96} normal block at 0x0000029205C256B0, 40 bytes long.
 Data: <                > 80 DC C1 05 92 02 00 00 10 08 C2 05 92 02 00 00 
{73} normal block at 0x0000029205C1E0E0, 16 bytes long.
 Data: <   v            > 80 EA 91 76 F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x0000029205C1E180, 16 bytes long.
 Data: <@  v            > 40 E9 91 76 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000029205C1DBE0, 16 bytes long.
 Data: < W v            > F8 57 8E 76 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000029205C1E540, 16 bytes long.
 Data: < W v            > D8 57 8E 76 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000029205C1DF00, 16 bytes long.
 Data: <P  v            > 50 04 8E 76 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000029205C1DAF0, 16 bytes long.
 Data: <0  v            > 30 04 8E 76 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000029205C1DB90, 16 bytes long.
 Data: <   v            > E0 02 8E 76 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000029205C1E1D0, 16 bytes long.
 Data: <   v            > 10 04 8E 76 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000029205C1E4A0, 16 bytes long.
 Data: <p  v            > 70 04 8E 76 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000029205C1DFF0, 16 bytes long.
 Data: <   v            > 18 C0 8C 76 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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