Task 38620270

Name hif2a_2_A28_A11_r0_4-QUICO_ATM_OpenFF_NAGL_hif2a_2-4-6-RND0851_0
Workunit 31571519
Created 19 Apr 2026, 7:19:09 UTC
Sent 19 Apr 2026, 7:19:12 UTC
Report deadline 24 Apr 2026, 7:19:12 UTC
Received 20 Apr 2026, 8:51:40 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 610900
Run time 4 hours 51 min
CPU time 4 hours 10 min 53 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 7,992.16 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 509.47 MB
Peak swap size 9.53 GB
Peak disk usage 2.90 GB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
12:52:19 (113452): wrapper (7.9.26016): starting
12:52:19 (113452): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A28_A11_0.pdb
QB_A28_A11_0.xml
QB_A28_A11.inpcrd
QB_A28_A11_input.yaml
QB_A28_A11.pdb
QB_A28_A11.prmtop
QB_A28_A11_sys.xml
run.bat
run.sh
12:52:20 (113452): Library/usr/bin/tar.exe exited; CPU time 0.015625
12:52:20 (113452): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
17:42:20 (113452): C:/Windows/system32/cmd.exe exited; CPU time 15053.156250
17:42:20 (113452): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 495798433 bytes.
Dumping objects ->
{3835498} normal block at 0x00000289C61D4B50, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835487} normal block at 0x00000289C61D4AE0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835476} normal block at 0x00000289C61D4A70, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835465} normal block at 0x00000289C61D4A00, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835454} normal block at 0x00000289C61D4990, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835423} normal block at 0x00000289C7F6B000, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835410} normal block at 0x00000289C61CD150, 8 bytes long.
 Data: <  l&#198;&#137;   > 00 00 6C C6 89 02 00 00 
{3833957} normal block at 0x00000289C61CD6F0, 8 bytes long.
 Data: <&#160;&#213; &#198;&#137;   > A0 D5 1B C6 89 02 00 00 
..\zip\boinc_zip.cpp(122) : {310} normal block at 0x00000289C61C0710, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x00000289C61C1C30, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{294} normal block at 0x00000289C61D59E0, 16 bytes long.
 Data: <&#232;e &#198;&#137;           > E8 65 1D C6 89 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x00000289C61D5EE0, 16 bytes long.
 Data: <&#192;e &#198;&#137;           > C0 65 1D C6 89 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000289C61D0D10, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{291} normal block at 0x00000289C61D5670, 16 bytes long.
 Data: < e &#198;&#137;           > 98 65 1D C6 89 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000289C61D5710, 16 bytes long.
 Data: <pe &#198;&#137;           > 70 65 1D C6 89 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000289C61D5BC0, 16 bytes long.
 Data: <He &#198;&#137;           > 48 65 1D C6 89 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000289C61D5B20, 16 bytes long.
 Data: < e &#198;&#137;           > 20 65 1D C6 89 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x00000289C61D4840, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{286} normal block at 0x00000289C61D5D50, 16 bytes long.
 Data: <X&#179; &#198;&#137;           > 58 B3 1B C6 89 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000289C61D0BF0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{284} normal block at 0x00000289C61D5B70, 16 bytes long.
 Data: <0&#179; &#198;&#137;           > 30 B3 1B C6 89 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000289C61D5CB0, 16 bytes long.
 Data: < &#179; &#198;&#137;           > 08 B3 1B C6 89 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000289C61D5440, 16 bytes long.
 Data: <&#224;&#178; &#198;&#137;           > E0 B2 1B C6 89 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000289C61D5C60, 16 bytes long.
 Data: <&#184;&#178; &#198;&#137;           > B8 B2 1B C6 89 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000289C61D6110, 16 bytes long.
 Data: < &#178; &#198;&#137;           > 90 B2 1B C6 89 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000289C61D54E0, 16 bytes long.
 Data: <h&#178; &#198;&#137;           > 68 B2 1B C6 89 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000289C61D1670, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{276} normal block at 0x00000289C61D6160, 16 bytes long.
 Data: <@&#178; &#198;&#137;           > 40 B2 1B C6 89 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000289C61BB240, 320 bytes long.
 Data: <`a &#198;&#137;   p  &#198;&#137;   > 60 61 1D C6 89 02 00 00 70 16 1D C6 89 02 00 00 
{274} normal block at 0x00000289C61D53A0, 16 bytes long.
 Data: < e &#198;&#137;           > 00 65 1D C6 89 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000289C61D5FD0, 16 bytes long.
 Data: <&#216;d &#198;&#137;           > D8 64 1D C6 89 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000289C61D1250, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{271} normal block at 0x00000289C61D58A0, 16 bytes long.
 Data: <&#176;d &#198;&#137;           > B0 64 1D C6 89 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000289C61D0E30, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{269} normal block at 0x00000289C61D5A30, 16 bytes long.
 Data: <&#248;c &#198;&#137;           > F8 63 1D C6 89 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000289C61D6200, 16 bytes long.
 Data: <&#208;c &#198;&#137;           > D0 63 1D C6 89 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000289C61D60C0, 16 bytes long.
 Data: <&#168;c &#198;&#137;           > A8 63 1D C6 89 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000289C61D5E40, 16 bytes long.
 Data: < c &#198;&#137;           > 80 63 1D C6 89 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000289C61D6020, 16 bytes long.
 Data: <Xc &#198;&#137;           > 58 63 1D C6 89 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000289C61D5530, 16 bytes long.
 Data: <0c &#198;&#137;           > 30 63 1D C6 89 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000289C61D53F0, 16 bytes long.
 Data: <0L &#198;&#137;           > 30 4C 1D C6 89 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000289C61D4C30, 40 bytes long.
 Data: <&#240;S &#198;&#137;    &#176;&#246;&#199;&#137;   > F0 53 1D C6 89 02 00 00 00 B0 F6 C7 89 02 00 00 
{260} normal block at 0x00000289C61D5350, 16 bytes long.
 Data: < c &#198;&#137;           > 10 63 1D C6 89 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x00000289C61D6070, 16 bytes long.
 Data: <&#232;b &#198;&#137;           > E8 62 1D C6 89 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x00000289C61D0FB0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{257} normal block at 0x00000289C61D55D0, 16 bytes long.
 Data: <&#192;b &#198;&#137;           > C0 62 1D C6 89 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x00000289C61D62C0, 992 bytes long.
 Data: <&#208;U &#198;&#137;   &#176;  &#198;&#137;   > D0 55 1D C6 89 02 00 00 B0 0F 1D C6 89 02 00 00 
{92} normal block at 0x00000289C61D0C50, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{91} normal block at 0x00000289C61CD740, 16 bytes long.
 Data: < &#227; &#198;&#137;           > 20 E3 1B C6 89 02 00 00 00 00 00 00 00 00 00 00 
{90} normal block at 0x00000289C61BE320, 40 bytes long.
 Data: <@&#215; &#198;&#137;   P  &#198;&#137;   > 40 D7 1C C6 89 02 00 00 50 0C 1D C6 89 02 00 00 
{69} normal block at 0x00000289C61CD290, 16 bytes long.
 Data: < &#234;&#182;d&#246;           > 80 EA B6 64 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000289C61CD6A0, 16 bytes long.
 Data: <@&#233;&#182;d&#246;           > 40 E9 B6 64 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000289C61CD2E0, 16 bytes long.
 Data: <&#248;W&#179;d&#246;           > F8 57 B3 64 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000289C61CD650, 16 bytes long.
 Data: <&#216;W&#179;d&#246;           > D8 57 B3 64 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000289C61CD5B0, 16 bytes long.
 Data: <P &#179;d&#246;           > 50 04 B3 64 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000289C61CDE20, 16 bytes long.
 Data: <0 &#179;d&#246;           > 30 04 B3 64 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000289C61CD790, 16 bytes long.
 Data: <&#224; &#179;d&#246;           > E0 02 B3 64 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000289C61CD510, 16 bytes long.
 Data: <  &#179;d&#246;           > 10 04 B3 64 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x00000289C61CD470, 16 bytes long.
 Data: <p &#179;d&#246;           > 70 04 B3 64 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x00000289C61CDC40, 16 bytes long.
 Data: < &#192;&#177;d&#246;           > 18 C0 B1 64 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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