Task 38619711

Name HIF2A_2_A27_A19_r0_5-QUICO_ATM_GAFF2_NAGL_hif2a_2-4-6-RND7962_0
Workunit 31571034
Created 19 Apr 2026, 0:54:08 UTC
Sent 19 Apr 2026, 0:54:09 UTC
Report deadline 24 Apr 2026, 0:54:09 UTC
Received 19 Apr 2026, 6:10:17 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 541192
Run time 2 hours 14 min 18 sec
CPU time 2 hours 14 min 18 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 52,233.50 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 482.92 MB
Peak swap size 12.64 GB
Peak disk usage 2.90 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
05:57:30 (45604): wrapper (7.9.26016): starting
05:57:30 (45604): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A27_A19_0.pdb
QB_A27_A19_0.xml
QB_A27_A19.inpcrd
QB_A27_A19_input.yaml
QB_A27_A19.pdb
QB_A27_A19.prmtop
QB_A27_A19_sys.xml
run.bat
run.sh
05:57:31 (45604): Library/usr/bin/tar.exe exited; CPU time 0.015625
05:57:31 (45604): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'J:\BOINC\data\slots\32\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'J:\BOINC\data\slots\32\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
08:09:26 (45604): C:/Windows/system32/cmd.exe exited; CPU time 8058.531250
08:09:26 (45604): called boinc_finish(0)
0 bytes in 0 Free Blocks.
346 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 177686482 bytes.
Dumping objects ->
{3835584} normal block at 0x000002AFB85E62D0, 48 bytes long.
 Data: <PATH=J:\BOINC\da> 50 41 54 48 3D 4A 3A 5C 42 4F 49 4E 43 5C 64 61 
{3835573} normal block at 0x000002AFBA426120, 32 bytes long.
 Data: <HOME=J:\BOINC\da> 48 4F 4D 45 3D 4A 3A 5C 42 4F 49 4E 43 5C 64 61 
{3835562} normal block at 0x000002AFBA425E20, 32 bytes long.
 Data: <TMP=J:\BOINC\dat> 54 4D 50 3D 4A 3A 5C 42 4F 49 4E 43 5C 64 61 74 
{3835551} normal block at 0x000002AFBA426EA0, 32 bytes long.
 Data: <TEMP=J:\BOINC\da> 54 45 4D 50 3D 4A 3A 5C 42 4F 49 4E 43 5C 64 61 
{3835540} normal block at 0x000002AFBA426BA0, 32 bytes long.
 Data: <TMPDIR=J:\BOINC\> 54 4D 50 44 49 52 3D 4A 3A 5C 42 4F 49 4E 43 5C 
{3835509} normal block at 0x000002AFB85E61F0, 48 bytes long.
 Data: <PATH=J:\BOINC\da> 50 41 54 48 3D 4A 3A 5C 42 4F 49 4E 43 5C 64 61 
{3835498} normal block at 0x000002AFBA3EEA70, 85 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835495} normal block at 0x000002AFB85DA690, 8 bytes long.
 Data: <  &#202;&#184;&#175;   > 00 00 CA B8 AF 02 00 00 
{3834715} normal block at 0x000002AFBA3EEB10, 85 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833989} normal block at 0x000002AFB85D9CE0, 8 bytes long.
 Data: <p&#225;\&#184;&#175;   > 70 E1 5C B8 AF 02 00 00 
..\zip\boinc_zip.cpp(122) : {326} normal block at 0x000002AFB85D16A0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{311} normal block at 0x000002AFB85D2FE0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{310} normal block at 0x000002AFB85E7010, 16 bytes long.
 Data: < |^&#184;&#175;           > 18 7C 5E B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{309} normal block at 0x000002AFB85E69D0, 16 bytes long.
 Data: <&#240;{^&#184;&#175;           > F0 7B 5E B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{308} normal block at 0x000002AFB85E0DB0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{307} normal block at 0x000002AFB85E7420, 16 bytes long.
 Data: <&#200;{^&#184;&#175;           > C8 7B 5E B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{306} normal block at 0x000002AFB85E6E80, 16 bytes long.
 Data: <&#160;{^&#184;&#175;           > A0 7B 5E B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{305} normal block at 0x000002AFB85E7380, 16 bytes long.
 Data: <x{^&#184;&#175;           > 78 7B 5E B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{304} normal block at 0x000002AFB85E6980, 16 bytes long.
 Data: <P{^&#184;&#175;           > 50 7B 5E B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{303} normal block at 0x000002AFB85E5D90, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{302} normal block at 0x000002AFB85E6B60, 16 bytes long.
 Data: <  ]&#184;&#175;           > 88 08 5D B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{301} normal block at 0x000002AFB85E0570, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{300} normal block at 0x000002AFB85E70B0, 16 bytes long.
 Data: <` ]&#184;&#175;           > 60 08 5D B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000002AFB85E7830, 16 bytes long.
 Data: <8 ]&#184;&#175;           > 38 08 5D B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000002AFB85E77E0, 16 bytes long.
 Data: <  ]&#184;&#175;           > 10 08 5D B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000002AFB85E7330, 16 bytes long.
 Data: <&#232; ]&#184;&#175;           > E8 07 5D B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000002AFB85E6E30, 16 bytes long.
 Data: <&#192; ]&#184;&#175;           > C0 07 5D B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000002AFB85E76F0, 16 bytes long.
 Data: <  ]&#184;&#175;           > 98 07 5D B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000002AFB85E0510, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{292} normal block at 0x000002AFB85E6B10, 16 bytes long.
 Data: <p ]&#184;&#175;           > 70 07 5D B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000002AFB85D0770, 320 bytes long.
 Data: < k^&#184;&#175;     ^&#184;&#175;   > 10 6B 5E B8 AF 02 00 00 10 05 5E B8 AF 02 00 00 
{290} normal block at 0x000002AFB85E7600, 16 bytes long.
 Data: <0{^&#184;&#175;           > 30 7B 5E B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000002AFB85E6CF0, 16 bytes long.
 Data: < {^&#184;&#175;           > 08 7B 5E B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000002AFB85E0B70, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{287} normal block at 0x000002AFB85E72E0, 16 bytes long.
 Data: <&#224;z^&#184;&#175;           > E0 7A 5E B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000002AFB85E0390, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{285} normal block at 0x000002AFB85E74C0, 16 bytes long.
 Data: <(z^&#184;&#175;           > 28 7A 5E B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002AFB85E7470, 16 bytes long.
 Data: < z^&#184;&#175;           > 00 7A 5E B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002AFB85E6D40, 16 bytes long.
 Data: <&#216;y^&#184;&#175;           > D8 79 5E B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002AFB85E7290, 16 bytes long.
 Data: <&#176;y^&#184;&#175;           > B0 79 5E B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002AFB85E7880, 16 bytes long.
 Data: < y^&#184;&#175;           > 88 79 5E B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000002AFB85E73D0, 16 bytes long.
 Data: <`y^&#184;&#175;           > 60 79 5E B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000002AFB85E71A0, 16 bytes long.
 Data: < ]^&#184;&#175;           > 20 5D 5E B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000002AFB85E5D20, 40 bytes long.
 Data: <&#160;q^&#184;&#175;   &#240;a^&#184;&#175;   > A0 71 5E B8 AF 02 00 00 F0 61 5E B8 AF 02 00 00 
{276} normal block at 0x000002AFB85E6AC0, 16 bytes long.
 Data: <@y^&#184;&#175;           > 40 79 5E B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002AFB85E6C50, 16 bytes long.
 Data: < y^&#184;&#175;           > 18 79 5E B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002AFB85E0C90, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{273} normal block at 0x000002AFB85E76A0, 16 bytes long.
 Data: <&#240;x^&#184;&#175;           > F0 78 5E B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002AFB85E78F0, 992 bytes long.
 Data: <&#160;v^&#184;&#175;     ^&#184;&#175;   > A0 76 5E B8 AF 02 00 00 90 0C 5E B8 AF 02 00 00 
{108} normal block at 0x000002AFB85E09F0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{107} normal block at 0x000002AFB85DAB40, 16 bytes long.
 Data: <@&#221;\&#184;&#175;           > 40 DD 5C B8 AF 02 00 00 00 00 00 00 00 00 00 00 
{106} normal block at 0x000002AFB85CDD40, 40 bytes long.
 Data: <@&#171;]&#184;&#175;   &#240;	^&#184;&#175;   > 40 AB 5D B8 AF 02 00 00 F0 09 5E B8 AF 02 00 00 
{85} normal block at 0x000002AFB85DA050, 16 bytes long.
 Data: < &#234;q&#161;&#246;           > 80 EA 71 A1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{84} normal block at 0x000002AFB85DA1E0, 16 bytes long.
 Data: <@&#233;q&#161;&#246;           > 40 E9 71 A1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{83} normal block at 0x000002AFB85DA4B0, 16 bytes long.
 Data: <&#248;Wn&#161;&#246;           > F8 57 6E A1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{82} normal block at 0x000002AFB85DA0F0, 16 bytes long.
 Data: <&#216;Wn&#161;&#246;           > D8 57 6E A1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{81} normal block at 0x000002AFB85DA140, 16 bytes long.
 Data: <P n&#161;&#246;           > 50 04 6E A1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{80} normal block at 0x000002AFB85DA000, 16 bytes long.
 Data: <0 n&#161;&#246;           > 30 04 6E A1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{79} normal block at 0x000002AFB85D9C40, 16 bytes long.
 Data: <&#224; n&#161;&#246;           > E0 02 6E A1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{78} normal block at 0x000002AFB85DAAF0, 16 bytes long.
 Data: <  n&#161;&#246;           > 10 04 6E A1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{77} normal block at 0x000002AFB85D9FB0, 16 bytes long.
 Data: <p n&#161;&#246;           > 70 04 6E A1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{76} normal block at 0x000002AFB85DA780, 16 bytes long.
 Data: < &#192;l&#161;&#246;           > 18 C0 6C A1 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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