Task 38619687

Name hif2a_2_A41_A31_r0_1-QUICO_ATM_OpenFF_NAGL_hif2a_2-2-6-RND3777_1
Workunit 31570531
Created 19 Apr 2026, 0:38:07 UTC
Sent 19 Apr 2026, 0:38:20 UTC
Report deadline 24 Apr 2026, 0:38:20 UTC
Received 19 Apr 2026, 7:30:19 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 604231
Run time 3 hours 8 min 23 sec
CPU time 3 hours 8 min 23 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 82,585.64 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 491.30 MB
Peak swap size 12.80 GB
Peak disk usage 3.75 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:07:50 (15084): wrapper (7.9.26016): starting
23:07:50 (15084): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A41_A31_0.pdb
QB_A41_A31_0.xml
QB_A41_A31.inpcrd
QB_A41_A31_input.yaml
QB_A41_A31.pdb
QB_A41_A31.prmtop
QB_A41_A31_sys.xml
run.bat
run.sh
23:07:51 (15084): Library/usr/bin/tar.exe exited; CPU time 0.000000
23:07:51 (15084): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'M:\BOINC\slots\10\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'M:\BOINC\slots\10\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
02:27:58 (15084): C:/Windows/system32/cmd.exe exited; CPU time 11303.296875
02:27:58 (15084): called boinc_finish(0)
0 bytes in 0 Free Blocks.
456 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 200903083 bytes.
Dumping objects ->
{3835623} normal block at 0x0000026E59225240, 48 bytes long.
 Data: <PATH=M:\BOINC\sl> 50 41 54 48 3D 4D 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835612} normal block at 0x0000026E5AFC6E90, 32 bytes long.
 Data: <HOME=M:\BOINC\sl> 48 4F 4D 45 3D 4D 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835601} normal block at 0x0000026E5AFC7010, 32 bytes long.
 Data: <TMP=M:\BOINC\slo> 54 4D 50 3D 4D 3A 5C 42 4F 49 4E 43 5C 73 6C 6F 
{3835590} normal block at 0x0000026E5AFC7130, 32 bytes long.
 Data: <TEMP=M:\BOINC\sl> 54 45 4D 50 3D 4D 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835579} normal block at 0x0000026E5AFC7310, 32 bytes long.
 Data: <TMPDIR=M:\BOINC\> 54 4D 50 44 49 52 3D 4D 3A 5C 42 4F 49 4E 43 5C 
{3835548} normal block at 0x0000026E59224F30, 48 bytes long.
 Data: <PATH=M:\BOINC\sl> 50 41 54 48 3D 4D 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835537} normal block at 0x0000026E5928A090, 140 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835534} normal block at 0x0000026E5921D870, 8 bytes long.
 Data: <  _Yn   > 00 00 5F 59 6E 02 00 00 
{3834734} normal block at 0x0000026E59289EF0, 140 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833963} normal block at 0x0000026E5921D780, 8 bytes long.
 Data: <&#192;&#216; Yn   > C0 D8 20 59 6E 02 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x0000026E59210CB0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x0000026E592122B0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{297} normal block at 0x0000026E59226230, 16 bytes long.
 Data: < k"Yn           > 18 6B 22 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000026E59225B00, 16 bytes long.
 Data: <&#240;j"Yn           > F0 6A 22 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000026E5921FCD0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{294} normal block at 0x0000026E59225BF0, 16 bytes long.
 Data: <&#200;j"Yn           > C8 6A 22 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000026E59225920, 16 bytes long.
 Data: <&#160;j"Yn           > A0 6A 22 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000026E592261E0, 16 bytes long.
 Data: <xj"Yn           > 78 6A 22 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000026E59225AB0, 16 bytes long.
 Data: <Pj"Yn           > 50 6A 22 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000026E59224C20, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{289} normal block at 0x0000026E59225A60, 16 bytes long.
 Data: < &#244; Yn           > 18 F4 20 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000026E5921F910, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{287} normal block at 0x0000026E59226190, 16 bytes long.
 Data: <&#240;&#243; Yn           > F0 F3 20 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000026E59225DD0, 16 bytes long.
 Data: <&#200;&#243; Yn           > C8 F3 20 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000026E59225CE0, 16 bytes long.
 Data: <&#160;&#243; Yn           > A0 F3 20 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000026E59226690, 16 bytes long.
 Data: <x&#243; Yn           > 78 F3 20 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000026E592258D0, 16 bytes long.
 Data: <P&#243; Yn           > 50 F3 20 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000026E59225A10, 16 bytes long.
 Data: <(&#243; Yn           > 28 F3 20 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000026E5921F670, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{279} normal block at 0x0000026E592260A0, 16 bytes long.
 Data: < &#243; Yn           > 00 F3 20 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000026E5920F300, 320 bytes long.
 Data: <&#160;`"Yn   p&#246;!Yn   > A0 60 22 59 6E 02 00 00 70 F6 21 59 6E 02 00 00 
{277} normal block at 0x0000026E59226780, 16 bytes long.
 Data: <0j"Yn           > 30 6A 22 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000026E59225BA0, 16 bytes long.
 Data: < j"Yn           > 08 6A 22 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000026E59220030, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{274} normal block at 0x0000026E59226500, 16 bytes long.
 Data: <&#224;i"Yn           > E0 69 22 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000026E59220270, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{272} normal block at 0x0000026E592259C0, 16 bytes long.
 Data: <(i"Yn           > 28 69 22 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000026E59226000, 16 bytes long.
 Data: < i"Yn           > 00 69 22 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000026E59225F60, 16 bytes long.
 Data: <&#216;h"Yn           > D8 68 22 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000026E59225F10, 16 bytes long.
 Data: <&#176;h"Yn           > B0 68 22 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000026E59225D80, 16 bytes long.
 Data: < h"Yn           > 88 68 22 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000026E59225880, 16 bytes long.
 Data: <`h"Yn           > 60 68 22 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000026E59225EC0, 16 bytes long.
 Data: <&#224;M"Yn           > E0 4D 22 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000026E59224DE0, 40 bytes long.
 Data: <&#192;^"Yn   0O"Yn   > C0 5E 22 59 6E 02 00 00 30 4F 22 59 6E 02 00 00 
{263} normal block at 0x0000026E592262D0, 16 bytes long.
 Data: <@h"Yn           > 40 68 22 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000026E59226370, 16 bytes long.
 Data: < h"Yn           > 18 68 22 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000026E59220390, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{260} normal block at 0x0000026E59225970, 16 bytes long.
 Data: <&#240;g"Yn           > F0 67 22 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000026E592267F0, 992 bytes long.
 Data: <pY"Yn     "Yn   > 70 59 22 59 6E 02 00 00 90 03 22 59 6E 02 00 00 
{95} normal block at 0x0000026E592204B0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{94} normal block at 0x0000026E5921D730, 16 bytes long.
 Data: < &#240; Yn           > 00 F0 20 59 6E 02 00 00 00 00 00 00 00 00 00 00 
{93} normal block at 0x0000026E5920F000, 40 bytes long.
 Data: <0&#215;!Yn   &#176; "Yn   > 30 D7 21 59 6E 02 00 00 B0 04 22 59 6E 02 00 00 
{72} normal block at 0x0000026E5921D9B0, 16 bytes long.
 Data: < &#234;&#158;&#215;&#247;           > 80 EA 9E D7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000026E5921D5A0, 16 bytes long.
 Data: <@&#233;&#158;&#215;&#247;           > 40 E9 9E D7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000026E5921DCD0, 16 bytes long.
 Data: <&#248;W&#155;&#215;&#247;           > F8 57 9B D7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000026E5921D8C0, 16 bytes long.
 Data: <&#216;W&#155;&#215;&#247;           > D8 57 9B D7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000026E5921D690, 16 bytes long.
 Data: <P &#155;&#215;&#247;           > 50 04 9B D7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000026E5921E040, 16 bytes long.
 Data: <0 &#155;&#215;&#247;           > 30 04 9B D7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000026E5921E220, 16 bytes long.
 Data: <&#224; &#155;&#215;&#247;           > E0 02 9B D7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000026E5921D370, 16 bytes long.
 Data: <  &#155;&#215;&#247;           > 10 04 9B D7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000026E5921D640, 16 bytes long.
 Data: <p &#155;&#215;&#247;           > 70 04 9B D7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000026E5921DA00, 16 bytes long.
 Data: < &#192; &#215;&#247;           > 18 C0 99 D7 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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