Task 38619293

Name p38_2_A27_A09_r0_4-QUICO_ATM_GAFF2_NAGL_p38_2-1-6-RND9888_0
Workunit 31570673
Created 18 Apr 2026, 20:33:41 UTC
Sent 18 Apr 2026, 20:33:42 UTC
Report deadline 23 Apr 2026, 20:33:42 UTC
Received 19 Apr 2026, 1:43:42 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 643315
Run time 5 hours 3 min 31 sec
CPU time 4 hours 56 min 58 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 104,762.54 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 754.20 MB
Peak swap size 13.26 GB
Peak disk usage 3.08 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
22:40:33 (144112): wrapper (7.9.26016): starting
22:40:33 (144112): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A27_A09_0.pdb
QB_A27_A09_0.xml
QB_A27_A09.inpcrd
QB_A27_A09_input.yaml
QB_A27_A09.pdb
QB_A27_A09.prmtop
QB_A27_A09_sys.xml
run.bat
run.sh
22:40:35 (144112): Library/usr/bin/tar.exe exited; CPU time 0.015625
22:40:35 (144112): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
'DOSKEY' n'est pas reconnu en tant que commande interne
ou externe, un programme ex&#130;cutable ou un fichier de commandes.
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
03:43:18 (144112): C:/Windows/system32/cmd.exe exited; CPU time 17818.828125
03:43:18 (144112): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 383812711 bytes.
Dumping objects ->
{3835597} normal block at 0x0000017F5EDA9F30, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835586} normal block at 0x0000017F5EDA9750, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835575} normal block at 0x0000017F5EDA9A60, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835564} normal block at 0x0000017F5EDA94B0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835553} normal block at 0x0000017F5CE3A540, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835522} normal block at 0x0000017F5ED4F7F0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835509} normal block at 0x0000017F5CE36F30, 8 bytes long.
 Data: <  &#165;^    > 00 00 A5 5E 7F 01 00 00 
{3833971} normal block at 0x0000017F5CE36E90, 8 bytes long.
 Data: < &#229;&#229;\    > 80 E5 E5 5C 7F 01 00 00 
..\zip\boinc_zip.cpp(122) : {317} normal block at 0x0000017F5CE21560, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{302} normal block at 0x0000017F5CE22A70, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{301} normal block at 0x0000017F5CE36D00, 16 bytes long.
 Data: <H&#178;&#227;\            > 48 B2 E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x0000017F5CE36A80, 16 bytes long.
 Data: < &#178;&#227;\            > 20 B2 E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x0000017F5CE34400, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{298} normal block at 0x0000017F5CE36DA0, 16 bytes long.
 Data: <&#248;&#177;&#227;\            > F8 B1 E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x0000017F5CE36C10, 16 bytes long.
 Data: <&#208;&#177;&#227;\            > D0 B1 E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000017F5CE369E0, 16 bytes long.
 Data: <&#168;&#177;&#227;\            > A8 B1 E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000017F5CE36940, 16 bytes long.
 Data: < &#177;&#227;\            > 80 B1 E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000017F5CE3A4D0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{293} normal block at 0x0000017F5CE377A0, 16 bytes long.
 Data: <X&#172;&#227;\            > 58 AC E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000017F5CE341C0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{291} normal block at 0x0000017F5CE36BC0, 16 bytes long.
 Data: <0&#172;&#227;\            > 30 AC E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000017F5CE37160, 16 bytes long.
 Data: < &#172;&#227;\            > 08 AC E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000017F5CE36990, 16 bytes long.
 Data: <&#224;&#171;&#227;\            > E0 AB E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000017F5CE37110, 16 bytes long.
 Data: <&#184;&#171;&#227;\            > B8 AB E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000017F5CE375C0, 16 bytes long.
 Data: < &#171;&#227;\            > 90 AB E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000017F5CE37570, 16 bytes long.
 Data: <h&#171;&#227;\            > 68 AB E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000017F5CE34040, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{283} normal block at 0x0000017F5CE36B70, 16 bytes long.
 Data: <@&#171;&#227;\            > 40 AB E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000017F5CE3AB40, 320 bytes long.
 Data: <pk&#227;\    @@&#227;\    > 70 6B E3 5C 7F 01 00 00 40 40 E3 5C 7F 01 00 00 
{281} normal block at 0x0000017F5CE37520, 16 bytes long.
 Data: <`&#177;&#227;\            > 60 B1 E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000017F5CE37430, 16 bytes long.
 Data: <8&#177;&#227;\            > 38 B1 E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000017F5CE34BE0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{278} normal block at 0x0000017F5CE374D0, 16 bytes long.
 Data: < &#177;&#227;\            > 10 B1 E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000017F5CE33FE0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{276} normal block at 0x0000017F5CE37390, 16 bytes long.
 Data: <X&#176;&#227;\            > 58 B0 E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000017F5CE36A30, 16 bytes long.
 Data: <0&#176;&#227;\            > 30 B0 E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000017F5CE370C0, 16 bytes long.
 Data: < &#176;&#227;\            > 08 B0 E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000017F5CE377F0, 16 bytes long.
 Data: <&#224;&#175;&#227;\            > E0 AF E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000017F5CE37610, 16 bytes long.
 Data: <&#184;&#175;&#227;\            > B8 AF E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000017F5CE37340, 16 bytes long.
 Data: < &#175;&#227;\            > 90 AF E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000017F5CE36CB0, 16 bytes long.
 Data: < &#170;&#227;\            > 10 AA E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000017F5CE3AA10, 40 bytes long.
 Data: <&#176;l&#227;\    &#240;&#247;&#212;^    > B0 6C E3 5C 7F 01 00 00 F0 F7 D4 5E 7F 01 00 00 
{267} normal block at 0x0000017F5CE37020, 16 bytes long.
 Data: <p&#175;&#227;\            > 70 AF E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000017F5CE372A0, 16 bytes long.
 Data: <H&#175;&#227;\            > 48 AF E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000017F5CE34AC0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{264} normal block at 0x0000017F5CE37890, 16 bytes long.
 Data: < &#175;&#227;\            > 20 AF E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000017F5CE3AF20, 992 bytes long.
 Data: < x&#227;\    &#192;J&#227;\    > 90 78 E3 5C 7F 01 00 00 C0 4A E3 5C 7F 01 00 00 
{99} normal block at 0x0000017F5CE34CA0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{98} normal block at 0x0000017F5CE36D50, 16 bytes long.
 Data: <&#176;&#165;&#227;\            > B0 A5 E3 5C 7F 01 00 00 00 00 00 00 00 00 00 00 
{97} normal block at 0x0000017F5CE3A5B0, 40 bytes long.
 Data: <Pm&#227;\    &#160;L&#227;\    > 50 6D E3 5C 7F 01 00 00 A0 4C E3 5C 7F 01 00 00 
{76} normal block at 0x0000017F5CE2DE50, 16 bytes long.
 Data: < &#234;&#216;&#156;&#247;           > 80 EA D8 9C F7 7F 00 00 00 00 00 00 00 00 00 00 
{75} normal block at 0x0000017F5CE2DD10, 16 bytes long.
 Data: <@&#233;&#216;&#156;&#247;           > 40 E9 D8 9C F7 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x0000017F5CE2D900, 16 bytes long.
 Data: <&#248;W&#213;&#156;&#247;           > F8 57 D5 9C F7 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x0000017F5CE2D8B0, 16 bytes long.
 Data: <&#216;W&#213;&#156;&#247;           > D8 57 D5 9C F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x0000017F5CE2D860, 16 bytes long.
 Data: <P &#213;&#156;&#247;           > 50 04 D5 9C F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000017F5CE2E350, 16 bytes long.
 Data: <0 &#213;&#156;&#247;           > 30 04 D5 9C F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000017F5CE2E3A0, 16 bytes long.
 Data: <&#224; &#213;&#156;&#247;           > E0 02 D5 9C F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000017F5CE2E3F0, 16 bytes long.
 Data: <  &#213;&#156;&#247;           > 10 04 D5 9C F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000017F5CE2E2B0, 16 bytes long.
 Data: <p &#213;&#156;&#247;           > 70 04 D5 9C F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000017F5CE2DA40, 16 bytes long.
 Data: < &#192;&#211;&#156;&#247;           > 18 C0 D3 9C F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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