Task 38619000

Name hif2a_2_A20_A33_r0_5-QUICO_ATM_OpenFF_NAGL_hif2a_2-3-6-RND1485_0
Workunit 31570411
Created 18 Apr 2026, 17:44:47 UTC
Sent 18 Apr 2026, 17:45:02 UTC
Report deadline 23 Apr 2026, 17:45:02 UTC
Received 18 Apr 2026, 19:39:04 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 649121
Run time 1 hours 43 min 42 sec
CPU time 1 hours 43 min 42 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 52,233.54 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 462.14 MB
Peak swap size 11.10 GB
Peak disk usage 2.89 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
10:56:28 (18480): wrapper (7.9.26016): starting
10:56:28 (18480): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A20_A33_0.pdb
QB_A20_A33_0.xml
QB_A20_A33.inpcrd
QB_A20_A33_input.yaml
QB_A20_A33.pdb
QB_A20_A33.prmtop
QB_A20_A33_sys.xml
run.bat
run.sh
10:56:29 (18480): Library/usr/bin/tar.exe exited; CPU time 0.000000
10:56:29 (18480): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\14\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\14\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
12:38:31 (18480): C:/Windows/system32/cmd.exe exited; CPU time 6222.000000
12:38:31 (18480): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 138198655 bytes.
Dumping objects ->
{3835288} normal block at 0x000002051FAEBFB0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835277} normal block at 0x000002051FAEC4F0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835266} normal block at 0x000002051FAEBC30, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835255} normal block at 0x000002051FAEC020, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835244} normal block at 0x000002051FAEC640, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835213} normal block at 0x0000020521850500, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835200} normal block at 0x000002051FAC0780, 8 bytes long.
 Data: <  &#245;     > 00 00 F5 1F 05 02 00 00 
{3833967} normal block at 0x000002051FAC0730, 8 bytes long.
 Data: < &#214;&#138;!    > 90 D6 8A 21 05 02 00 00 
..\zip\boinc_zip.cpp(122) : {315} normal block at 0x000002051FAB3C30, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x000002051FAB0800, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{299} normal block at 0x000002051FAC8C90, 16 bytes long.
 Data: <  &#172;             > 88 99 AC 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000002051FAC93C0, 16 bytes long.
 Data: <` &#172;             > 60 99 AC 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000002051FAC3420, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{296} normal block at 0x000002051FAC9050, 16 bytes long.
 Data: <8 &#172;             > 38 99 AC 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000002051FAC8AB0, 16 bytes long.
 Data: <  &#172;             > 10 99 AC 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000002051FAC9140, 16 bytes long.
 Data: <&#232; &#172;             > E8 98 AC 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000002051FAC8F10, 16 bytes long.
 Data: <&#192; &#172;             > C0 98 AC 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000002051FAC5170, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{291} normal block at 0x000002051FAC8A60, 16 bytes long.
 Data: <(/&#171;             > 28 2F AB 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000002051FAC3120, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{289} normal block at 0x000002051FAC95F0, 16 bytes long.
 Data: < /&#171;             > 00 2F AB 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000002051FAC9320, 16 bytes long.
 Data: <&#216;.&#171;             > D8 2E AB 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000002051FAC8A10, 16 bytes long.
 Data: <&#176;.&#171;             > B0 2E AB 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000002051FAC8FB0, 16 bytes long.
 Data: < .&#171;             > 88 2E AB 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002051FAC89C0, 16 bytes long.
 Data: <`.&#171;             > 60 2E AB 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002051FAC8F60, 16 bytes long.
 Data: <8.&#171;             > 38 2E AB 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002051FAC2E20, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{281} normal block at 0x000002051FAC87E0, 16 bytes long.
 Data: < .&#171;             > 10 2E AB 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000002051FAB2E10, 320 bytes long.
 Data: <&#224;&#135;&#172;      .&#172;     > E0 87 AC 1F 05 02 00 00 20 2E AC 1F 05 02 00 00 
{279} normal block at 0x000002051FAC9370, 16 bytes long.
 Data: <&#160; &#172;             > A0 98 AC 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000002051FAC9460, 16 bytes long.
 Data: <x &#172;             > 78 98 AC 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000002051FAC2F40, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{276} normal block at 0x000002051FAC9000, 16 bytes long.
 Data: <P &#172;             > 50 98 AC 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002051FAC2D60, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{274} normal block at 0x000002051FAC8970, 16 bytes long.
 Data: < &#151;&#172;             > 98 97 AC 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002051FAC8EC0, 16 bytes long.
 Data: <p&#151;&#172;             > 70 97 AC 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002051FAC9280, 16 bytes long.
 Data: <H&#151;&#172;             > 48 97 AC 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002051FAC9190, 16 bytes long.
 Data: < &#151;&#172;             > 20 97 AC 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000002051FAC8BA0, 16 bytes long.
 Data: <&#248;&#150;&#172;             > F8 96 AC 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002051FAC8E70, 16 bytes long.
 Data: <&#208;&#150;&#172;             > D0 96 AC 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002051FAC8E20, 16 bytes long.
 Data: < Q&#172;             > 00 51 AC 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000002051FAC5100, 40 bytes long.
 Data: < &#142;&#172;       &#133;!    > 20 8E AC 1F 05 02 00 00 00 05 85 21 05 02 00 00 
{265} normal block at 0x000002051FAC86F0, 16 bytes long.
 Data: <&#176;&#150;&#172;             > B0 96 AC 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002051FAC8DD0, 16 bytes long.
 Data: < &#150;&#172;             > 88 96 AC 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000002051FAC3300, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{262} normal block at 0x000002051FAC8B50, 16 bytes long.
 Data: <`&#150;&#172;             > 60 96 AC 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002051FAC9660, 992 bytes long.
 Data: <P&#139;&#172;      3&#172;     > 50 8B AC 1F 05 02 00 00 00 33 AC 1F 05 02 00 00 
{97} normal block at 0x000002051FAC2EE0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{96} normal block at 0x000002051FABF970, 16 bytes long.
 Data: < P&#172;             > 90 50 AC 1F 05 02 00 00 00 00 00 00 00 00 00 00 
{95} normal block at 0x000002051FAC5090, 40 bytes long.
 Data: <p&#249;&#171;     &#224;.&#172;     > 70 F9 AB 1F 05 02 00 00 E0 2E AC 1F 05 02 00 00 
{74} normal block at 0x000002051FAC0550, 16 bytes long.
 Data: < &#234;&#229; &#246;           > 80 EA E5 17 F6 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x000002051FAC0640, 16 bytes long.
 Data: <@&#233;&#229; &#246;           > 40 E9 E5 17 F6 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x000002051FAC0230, 16 bytes long.
 Data: <&#248;W&#226; &#246;           > F8 57 E2 17 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000002051FAC01E0, 16 bytes long.
 Data: <&#216;W&#226; &#246;           > D8 57 E2 17 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000002051FAC0190, 16 bytes long.
 Data: <P &#226; &#246;           > 50 04 E2 17 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000002051FABFB00, 16 bytes long.
 Data: <0 &#226; &#246;           > 30 04 E2 17 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000002051FAC0140, 16 bytes long.
 Data: <&#224; &#226; &#246;           > E0 02 E2 17 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000002051FAC0460, 16 bytes long.
 Data: <  &#226; &#246;           > 10 04 E2 17 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000002051FAC0370, 16 bytes long.
 Data: <p &#226; &#246;           > 70 04 E2 17 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000002051FABFDD0, 16 bytes long.
 Data: < &#192;&#224; &#246;           > 18 C0 E0 17 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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