Task 38618309

Name hif2a_2_A34_A04_r0_4-QUICO_ATM_OpenFF_NAGL_hif2a_2-4-6-RND2735_0
Workunit 31569824
Created 18 Apr 2026, 11:44:34 UTC
Sent 18 Apr 2026, 11:44:40 UTC
Report deadline 23 Apr 2026, 11:44:40 UTC
Received 18 Apr 2026, 14:44:19 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 649517
Run time 2 hours 59 min 12 sec
CPU time 2 hours 48 min 12 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 12,961.51 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 462.79 MB
Peak swap size 9.49 GB
Peak disk usage 2.90 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
13:46:00 (26704): wrapper (7.9.26016): starting
13:46:00 (26704): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A04_0.pdb
QB_A34_A04_0.xml
QB_A34_A04.inpcrd
QB_A34_A04_input.yaml
QB_A34_A04.pdb
QB_A34_A04.prmtop
QB_A34_A04_sys.xml
run.bat
run.sh
13:46:01 (26704): Library/usr/bin/tar.exe exited; CPU time 0.000000
13:46:01 (26704): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
16:43:58 (26704): C:/Windows/system32/cmd.exe exited; CPU time 10092.359375
16:43:58 (26704): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 282332493 bytes.
Dumping objects ->
{3835226} normal block at 0x0000024A3E7479D0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835215} normal block at 0x0000024A3E748140, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835204} normal block at 0x0000024A3E747C70, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835193} normal block at 0x0000024A3E747570, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835182} normal block at 0x0000024A3E7472D0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835151} normal block at 0x0000024A3CA5B960, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835138} normal block at 0x0000024A3CA2CCB0, 8 bytes long.
 Data: <  &#160;<J   > 00 00 A0 3C 4A 02 00 00 
{3833985} normal block at 0x0000024A3CA2D4D0, 8 bytes long.
 Data: <p&#235;Y>J   > 70 EB 59 3E 4A 02 00 00 
..\zip\boinc_zip.cpp(122) : {324} normal block at 0x0000024A3CA28550, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{309} normal block at 0x0000024A3CA290F0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{308} normal block at 0x0000024A3CA37C00, 16 bytes long.
 Data: < &#142;&#163;<J           > 98 8E A3 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{307} normal block at 0x0000024A3CA38060, 16 bytes long.
 Data: <p&#142;&#163;<J           > 70 8E A3 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{306} normal block at 0x0000024A3CA310D0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{305} normal block at 0x0000024A3CA38330, 16 bytes long.
 Data: <H&#142;&#163;<J           > 48 8E A3 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{304} normal block at 0x0000024A3CA37BB0, 16 bytes long.
 Data: < &#142;&#163;<J           > 20 8E A3 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{303} normal block at 0x0000024A3CA38010, 16 bytes long.
 Data: <&#248; &#163;<J           > F8 8D A3 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{302} normal block at 0x0000024A3CA389C0, 16 bytes long.
 Data: <&#208; &#163;<J           > D0 8D A3 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{301} normal block at 0x0000024A3CA362E0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{300} normal block at 0x0000024A3CA37FC0, 16 bytes long.
 Data: <&#168; &#162;<J           > A8 07 A2 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x0000024A3CA31070, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{298} normal block at 0x0000024A3CA37F70, 16 bytes long.
 Data: <  &#162;<J           > 80 07 A2 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000024A3CA383D0, 16 bytes long.
 Data: <X &#162;<J           > 58 07 A2 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000024A3CA37C50, 16 bytes long.
 Data: <0 &#162;<J           > 30 07 A2 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000024A3CA380B0, 16 bytes long.
 Data: <  &#162;<J           > 08 07 A2 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000024A3CA37ED0, 16 bytes long.
 Data: <&#224; &#162;<J           > E0 06 A2 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000024A3CA388D0, 16 bytes long.
 Data: <&#184; &#162;<J           > B8 06 A2 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000024A3CA319D0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{290} normal block at 0x0000024A3CA38100, 16 bytes long.
 Data: <  &#162;<J           > 90 06 A2 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000024A3CA20690, 320 bytes long.
 Data: <  &#163;<J   &#208; &#163;<J   > 00 81 A3 3C 4A 02 00 00 D0 19 A3 3C 4A 02 00 00 
{288} normal block at 0x0000024A3CA38920, 16 bytes long.
 Data: <&#176; &#163;<J           > B0 8D A3 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000024A3CA38880, 16 bytes long.
 Data: <  &#163;<J           > 88 8D A3 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000024A3CA313D0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{285} normal block at 0x0000024A3CA38830, 16 bytes long.
 Data: <` &#163;<J           > 60 8D A3 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000024A3CA31190, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{283} normal block at 0x0000024A3CA387E0, 16 bytes long.
 Data: <&#168;&#140;&#163;<J           > A8 8C A3 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000024A3CA37CF0, 16 bytes long.
 Data: < &#140;&#163;<J           > 80 8C A3 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000024A3CA37D90, 16 bytes long.
 Data: <X&#140;&#163;<J           > 58 8C A3 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000024A3CA381A0, 16 bytes long.
 Data: <0&#140;&#163;<J           > 30 8C A3 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000024A3CA384C0, 16 bytes long.
 Data: < &#140;&#163;<J           > 08 8C A3 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000024A3CA38A60, 16 bytes long.
 Data: <&#224;&#139;&#163;<J           > E0 8B A3 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000024A3CA38650, 16 bytes long.
 Data: < ^&#163;<J           > 10 5E A3 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000024A3CA35E10, 40 bytes long.
 Data: <P&#134;&#163;<J   `&#185;&#165;<J   > 50 86 A3 3C 4A 02 00 00 60 B9 A5 3C 4A 02 00 00 
{274} normal block at 0x0000024A3CA38150, 16 bytes long.
 Data: <&#192;&#139;&#163;<J           > C0 8B A3 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000024A3CA38A10, 16 bytes long.
 Data: < &#139;&#163;<J           > 98 8B A3 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000024A3CA31670, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{271} normal block at 0x0000024A3CA37E30, 16 bytes long.
 Data: <p&#139;&#163;<J           > 70 8B A3 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000024A3CA38B70, 992 bytes long.
 Data: <0~&#163;<J   p &#163;<J   > 30 7E A3 3C 4A 02 00 00 70 16 A3 3C 4A 02 00 00 
{106} normal block at 0x0000024A3CA31A90, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{105} normal block at 0x0000024A3CA2CC10, 16 bytes long.
 Data: <0d&#163;<J           > 30 64 A3 3C 4A 02 00 00 00 00 00 00 00 00 00 00 
{104} normal block at 0x0000024A3CA36430, 40 bytes long.
 Data: < &#204;&#162;<J     &#163;<J   > 10 CC A2 3C 4A 02 00 00 90 1A A3 3C 4A 02 00 00 
{83} normal block at 0x0000024A3CA2CE90, 16 bytes long.
 Data: < &#234;&#242;i&#246;           > 80 EA F2 69 F6 7F 00 00 00 00 00 00 00 00 00 00 
{82} normal block at 0x0000024A3CA2CE40, 16 bytes long.
 Data: <@&#233;&#242;i&#246;           > 40 E9 F2 69 F6 7F 00 00 00 00 00 00 00 00 00 00 
{81} normal block at 0x0000024A3CA2CDF0, 16 bytes long.
 Data: <&#248;W&#239;i&#246;           > F8 57 EF 69 F6 7F 00 00 00 00 00 00 00 00 00 00 
{80} normal block at 0x0000024A3CA2CB70, 16 bytes long.
 Data: <&#216;W&#239;i&#246;           > D8 57 EF 69 F6 7F 00 00 00 00 00 00 00 00 00 00 
{79} normal block at 0x0000024A3CA2D200, 16 bytes long.
 Data: <P &#239;i&#246;           > 50 04 EF 69 F6 7F 00 00 00 00 00 00 00 00 00 00 
{78} normal block at 0x0000024A3CA2CAD0, 16 bytes long.
 Data: <0 &#239;i&#246;           > 30 04 EF 69 F6 7F 00 00 00 00 00 00 00 00 00 00 
{77} normal block at 0x0000024A3CA2CDA0, 16 bytes long.
 Data: <&#224; &#239;i&#246;           > E0 02 EF 69 F6 7F 00 00 00 00 00 00 00 00 00 00 
{76} normal block at 0x0000024A3CA2CC60, 16 bytes long.
 Data: <  &#239;i&#246;           > 10 04 EF 69 F6 7F 00 00 00 00 00 00 00 00 00 00 
{75} normal block at 0x0000024A3CA2C8F0, 16 bytes long.
 Data: <p &#239;i&#246;           > 70 04 EF 69 F6 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x0000024A3CA2CD50, 16 bytes long.
 Data: < &#192;&#237;i&#246;           > 18 C0 ED 69 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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