Task 38617784

Name HIF2A_2_A02_A36_r0_1-QUICO_ATM_GAFF2_NAGL_hif2a_2-1-6-RND7255_0
Workunit 31569382
Created 18 Apr 2026, 7:13:16 UTC
Sent 18 Apr 2026, 7:13:23 UTC
Report deadline 23 Apr 2026, 7:13:23 UTC
Received 18 Apr 2026, 15:19:21 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 649098
Run time 2 hours 0 min 8 sec
CPU time 1 hours 59 min 36 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 91,069.07 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 514.21 MB
Peak swap size 18.84 GB
Peak disk usage 2.91 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
15:19:38 (23684): wrapper (7.9.26016): starting
15:19:38 (23684): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A02_A36_0.pdb
QB_A02_A36_0.xml
QB_A02_A36.inpcrd
QB_A02_A36_input.yaml
QB_A02_A36.pdb
QB_A02_A36.prmtop
QB_A02_A36_sys.xml
run.bat
run.sh
15:19:39 (23684): Library/usr/bin/tar.exe exited; CPU time 0.000000
15:19:39 (23684): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
17:19:02 (23684): C:/Windows/system32/cmd.exe exited; CPU time 7176.093750
17:19:02 (23684): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 113829977 bytes.
Dumping objects ->
{3835250} normal block at 0x000001F14034AC50, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835239} normal block at 0x000001F14034B2E0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835228} normal block at 0x000001F14034B200, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835217} normal block at 0x000001F14034A780, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835206} normal block at 0x000001F140320690, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835175} normal block at 0x000001F1422A6620, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835162} normal block at 0x000001F14031D150, 8 bytes long.
 Data: <  *@&#241;   > 00 00 2A 40 F1 01 00 00 
{3833959} normal block at 0x000001F14031D880, 8 bytes long.
 Data: <&#208;&#214;0@&#241;   > D0 D6 30 40 F1 01 00 00 
..\zip\boinc_zip.cpp(122) : {311} normal block at 0x000001F140310990, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000001F140311FB0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{295} normal block at 0x000001F1403256D0, 16 bytes long.
 Data: <&#184;i2@&#241;           > B8 69 32 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001F140325D60, 16 bytes long.
 Data: < i2@&#241;           > 90 69 32 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001F1403214B0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{292} normal block at 0x000001F1403264E0, 16 bytes long.
 Data: <hi2@&#241;           > 68 69 32 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001F140326490, 16 bytes long.
 Data: <@i2@&#241;           > 40 69 32 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001F140325720, 16 bytes long.
 Data: < i2@&#241;           > 18 69 32 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001F140326620, 16 bytes long.
 Data: <&#240;h2@&#241;           > F0 68 32 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001F140320460, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{287} normal block at 0x000001F1403263F0, 16 bytes long.
 Data: <  1@&#241;           > 18 07 31 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001F140321690, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{285} normal block at 0x000001F140326080, 16 bytes long.
 Data: <&#240; 1@&#241;           > F0 06 31 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001F140326210, 16 bytes long.
 Data: <&#200; 1@&#241;           > C8 06 31 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001F140325810, 16 bytes long.
 Data: <&#160; 1@&#241;           > A0 06 31 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001F140325A40, 16 bytes long.
 Data: <x 1@&#241;           > 78 06 31 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001F1403262B0, 16 bytes long.
 Data: <P 1@&#241;           > 50 06 31 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001F1403263A0, 16 bytes long.
 Data: <( 1@&#241;           > 28 06 31 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001F140321330, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{277} normal block at 0x000001F140326440, 16 bytes long.
 Data: <  1@&#241;           > 00 06 31 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001F140310600, 320 bytes long.
 Data: <@d2@&#241;   0 2@&#241;   > 40 64 32 40 F1 01 00 00 30 13 32 40 F1 01 00 00 
{275} normal block at 0x000001F140325D10, 16 bytes long.
 Data: <&#208;h2@&#241;           > D0 68 32 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001F1403261C0, 16 bytes long.
 Data: <&#168;h2@&#241;           > A8 68 32 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001F140321990, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{272} normal block at 0x000001F1403257C0, 16 bytes long.
 Data: < h2@&#241;           > 80 68 32 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001F140320FD0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{270} normal block at 0x000001F140325A90, 16 bytes long.
 Data: <&#200;g2@&#241;           > C8 67 32 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001F140326030, 16 bytes long.
 Data: <&#160;g2@&#241;           > A0 67 32 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001F1403259A0, 16 bytes long.
 Data: <xg2@&#241;           > 78 67 32 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001F140325B80, 16 bytes long.
 Data: <Pg2@&#241;           > 50 67 32 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001F1403265D0, 16 bytes long.
 Data: <(g2@&#241;           > 28 67 32 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001F140325CC0, 16 bytes long.
 Data: < g2@&#241;           > 00 67 32 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001F140326260, 16 bytes long.
 Data: <&#160; 2@&#241;           > A0 02 32 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001F1403202A0, 40 bytes long.
 Data: <`b2@&#241;    f*B&#241;   > 60 62 32 40 F1 01 00 00 20 66 2A 42 F1 01 00 00 
{261} normal block at 0x000001F140325FE0, 16 bytes long.
 Data: <&#224;f2@&#241;           > E0 66 32 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001F140325770, 16 bytes long.
 Data: <&#184;f2@&#241;           > B8 66 32 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001F1403215D0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{258} normal block at 0x000001F140325F40, 16 bytes long.
 Data: < f2@&#241;           > 90 66 32 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x000001F140326690, 992 bytes long.
 Data: <@_2@&#241;   &#208; 2@&#241;   > 40 5F 32 40 F1 01 00 00 D0 15 32 40 F1 01 00 00 
{93} normal block at 0x000001F140321630, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{92} normal block at 0x000001F14031DE70, 16 bytes long.
 Data: <0 2@&#241;           > 30 02 32 40 F1 01 00 00 00 00 00 00 00 00 00 00 
{91} normal block at 0x000001F140320230, 40 bytes long.
 Data: <p&#222;1@&#241;   0 2@&#241;   > 70 DE 31 40 F1 01 00 00 30 16 32 40 F1 01 00 00 
{70} normal block at 0x000001F14031DFB0, 16 bytes long.
 Data: < &#234;&#205; &#247;           > 80 EA CD 0E F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001F14031DAB0, 16 bytes long.
 Data: <@&#233;&#205; &#247;           > 40 E9 CD 0E F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001F14031D8D0, 16 bytes long.
 Data: <&#248;W&#202; &#247;           > F8 57 CA 0E F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001F14031D290, 16 bytes long.
 Data: <&#216;W&#202; &#247;           > D8 57 CA 0E F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001F14031D740, 16 bytes long.
 Data: <P &#202; &#247;           > 50 04 CA 0E F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001F14031D100, 16 bytes long.
 Data: <0 &#202; &#247;           > 30 04 CA 0E F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001F14031D650, 16 bytes long.
 Data: <&#224; &#202; &#247;           > E0 02 CA 0E F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001F14031DB50, 16 bytes long.
 Data: <  &#202; &#247;           > 10 04 CA 0E F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001F14031DC40, 16 bytes long.
 Data: <p &#202; &#247;           > 70 04 CA 0E F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001F14031D240, 16 bytes long.
 Data: < &#192;&#200; &#247;           > 18 C0 C8 0E F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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