Task 38616456

Name hif2a_A02_A24_r0_5-QUICO_ATM_GAFF2_NAGL_hif2a-5-6-RND8335_0
Workunit 31568336
Created 17 Apr 2026, 20:41:19 UTC
Sent 17 Apr 2026, 20:42:32 UTC
Report deadline 22 Apr 2026, 20:42:32 UTC
Received 17 Apr 2026, 22:26:09 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 651565
Run time 1 hours 42 min 30 sec
CPU time 1 hours 42 min 18 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 58,072.02 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 527.72 MB
Peak swap size 9.68 GB
Peak disk usage 2.90 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
16:43:46 (28524): wrapper (7.9.26016): starting
16:43:46 (28524): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A02_A24_0.pdb
QB_A02_A24_0.xml
QB_A02_A24.inpcrd
QB_A02_A24_input.yaml
QB_A02_A24.pdb
QB_A02_A24.prmtop
QB_A02_A24_sys.xml
run.bat
run.sh
16:43:47 (28524): Library/usr/bin/tar.exe exited; CPU time 0.000000
16:43:47 (28524): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
18:25:35 (28524): C:/Windows/system32/cmd.exe exited; CPU time 6138.593750
18:25:35 (28524): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 158301813 bytes.
Dumping objects ->
{3835542} normal block at 0x00000225A4751250, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835531} normal block at 0x00000225A47513A0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835520} normal block at 0x00000225A47511E0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835509} normal block at 0x00000225A4751170, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835498} normal block at 0x00000225A4751640, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835467} normal block at 0x00000225A124A6A0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835456} normal block at 0x00000225A4887A50, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835453} normal block at 0x00000225A1231660, 8 bytes long.
 Data: <  &#193;&#162;%   > 00 00 C1 A2 25 02 00 00 
{3834703} normal block at 0x00000225A4887D10, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833971} normal block at 0x00000225A1232100, 8 bytes long.
 Data: <&#208;&#130;'&#161;%   > D0 82 27 A1 25 02 00 00 
..\zip\boinc_zip.cpp(122) : {317} normal block at 0x00000225A1213800, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{302} normal block at 0x00000225A1214560, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{301} normal block at 0x00000225A124E870, 16 bytes long.
 Data: <(&#244;$&#161;%           > 28 F4 24 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x00000225A124EA50, 16 bytes long.
 Data: < &#244;$&#161;%           > 00 F4 24 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x00000225A1230E80, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{298} normal block at 0x00000225A124F040, 16 bytes long.
 Data: <&#216;&#243;$&#161;%           > D8 F3 24 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x00000225A124F090, 16 bytes long.
 Data: <&#176;&#243;$&#161;%           > B0 F3 24 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x00000225A124E280, 16 bytes long.
 Data: < &#243;$&#161;%           > 88 F3 24 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x00000225A124E9B0, 16 bytes long.
 Data: <`&#243;$&#161;%           > 60 F3 24 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x00000225A122E000, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{293} normal block at 0x00000225A124E5A0, 16 bytes long.
 Data: <  #&#161;%           > 08 00 23 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000225A12307C0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{291} normal block at 0x00000225A124E960, 16 bytes long.
 Data: <&#224;&#255;"&#161;%           > E0 FF 22 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000225A124EFF0, 16 bytes long.
 Data: <&#184;&#255;"&#161;%           > B8 FF 22 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000225A124EDC0, 16 bytes long.
 Data: < &#255;"&#161;%           > 90 FF 22 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x00000225A124EEB0, 16 bytes long.
 Data: <h&#255;"&#161;%           > 68 FF 22 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000225A124EBE0, 16 bytes long.
 Data: <@&#255;"&#161;%           > 40 FF 22 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000225A124E410, 16 bytes long.
 Data: < &#255;"&#161;%           > 18 FF 22 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000225A1230340, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{283} normal block at 0x00000225A124ED20, 16 bytes long.
 Data: <&#240;&#254;"&#161;%           > F0 FE 22 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000225A122FEF0, 320 bytes long.
 Data: < &#237;$&#161;%   @ #&#161;%   > 20 ED 24 A1 25 02 00 00 40 03 23 A1 25 02 00 00 
{281} normal block at 0x00000225A124E690, 16 bytes long.
 Data: <@&#243;$&#161;%           > 40 F3 24 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000225A124E460, 16 bytes long.
 Data: < &#243;$&#161;%           > 18 F3 24 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000225A1230DC0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{278} normal block at 0x00000225A124EF50, 16 bytes long.
 Data: <&#240;&#242;$&#161;%           > F0 F2 24 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000225A12302E0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{276} normal block at 0x00000225A124EC80, 16 bytes long.
 Data: <8&#242;$&#161;%           > 38 F2 24 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000225A124E3C0, 16 bytes long.
 Data: < &#242;$&#161;%           > 10 F2 24 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000225A124E550, 16 bytes long.
 Data: <&#232;&#241;$&#161;%           > E8 F1 24 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000225A124ED70, 16 bytes long.
 Data: <&#192;&#241;$&#161;%           > C0 F1 24 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000225A124E8C0, 16 bytes long.
 Data: < &#241;$&#161;%           > 98 F1 24 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000225A124EAA0, 16 bytes long.
 Data: <p&#241;$&#161;%           > 70 F1 24 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000225A124EB90, 16 bytes long.
 Data: <&#176;&#222;"&#161;%           > B0 DE 22 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000225A122DEB0, 40 bytes long.
 Data: < &#235;$&#161;%   &#160;&#166;$&#161;%   > 90 EB 24 A1 25 02 00 00 A0 A6 24 A1 25 02 00 00 
{267} normal block at 0x00000225A124E730, 16 bytes long.
 Data: <P&#241;$&#161;%           > 50 F1 24 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000225A124EB40, 16 bytes long.
 Data: <(&#241;$&#161;%           > 28 F1 24 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000225A12309A0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{264} normal block at 0x00000225A124E4B0, 16 bytes long.
 Data: < &#241;$&#161;%           > 00 F1 24 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000225A124F100, 992 bytes long.
 Data: <&#176;&#228;$&#161;%   &#160;	#&#161;%   > B0 E4 24 A1 25 02 00 00 A0 09 23 A1 25 02 00 00 
{99} normal block at 0x00000225A1230E20, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{98} normal block at 0x00000225A1231890, 16 bytes long.
 Data: <&#240;&#220;"&#161;%           > F0 DC 22 A1 25 02 00 00 00 00 00 00 00 00 00 00 
{97} normal block at 0x00000225A122DCF0, 40 bytes long.
 Data: <  #&#161;%     #&#161;%   > 90 18 23 A1 25 02 00 00 20 0E 23 A1 25 02 00 00 
{76} normal block at 0x00000225A1231700, 16 bytes long.
 Data: < &#234;"?&#246;           > 80 EA 22 3F F6 7F 00 00 00 00 00 00 00 00 00 00 
{75} normal block at 0x00000225A12319D0, 16 bytes long.
 Data: <@&#233;"?&#246;           > 40 E9 22 3F F6 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x00000225A12321F0, 16 bytes long.
 Data: <&#248;W ?&#246;           > F8 57 1F 3F F6 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x00000225A12315C0, 16 bytes long.
 Data: <&#216;W ?&#246;           > D8 57 1F 3F F6 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x00000225A1231F20, 16 bytes long.
 Data: <P  ?&#246;           > 50 04 1F 3F F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x00000225A1231C50, 16 bytes long.
 Data: <0  ?&#246;           > 30 04 1F 3F F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x00000225A1231610, 16 bytes long.
 Data: <&#224;  ?&#246;           > E0 02 1F 3F F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x00000225A1231750, 16 bytes long.
 Data: <   ?&#246;           > 10 04 1F 3F F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000225A1232010, 16 bytes long.
 Data: <p  ?&#246;           > 70 04 1F 3F F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000225A12317A0, 16 bytes long.
 Data: < &#192; ?&#246;           > 18 C0 1D 3F F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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