Task 38616009

Name hif2a_2_A09_A10_r0_3-QUICO_ATM_OpenFF_NAGL_hif2a_2-1-6-RND1679_1
Workunit 31568053
Created 17 Apr 2026, 18:07:20 UTC
Sent 17 Apr 2026, 18:07:44 UTC
Report deadline 22 Apr 2026, 18:07:44 UTC
Received 17 Apr 2026, 20:31:20 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 623100
Run time 2 hours 5 min 1 sec
CPU time 1 hours 53 min 49 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 45,119.70 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 502.99 MB
Peak swap size 9.61 GB
Peak disk usage 2.89 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
21:26:49 (4936): wrapper (7.9.26016): starting
21:26:49 (4936): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A09_A10_0.pdb
QB_A09_A10_0.xml
QB_A09_A10.inpcrd
QB_A09_A10_input.yaml
QB_A09_A10.pdb
QB_A09_A10.prmtop
QB_A09_A10_sys.xml
run.bat
run.sh
21:26:50 (4936): Library/usr/bin/tar.exe exited; CPU time 0.000000
21:26:50 (4936): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\2\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\2\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
23:31:11 (4936): C:/Windows/system32/cmd.exe exited; CPU time 6829.406250
23:31:11 (4936): called boinc_finish(0)
0 bytes in 0 Free Blocks.
766 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 127687071 bytes.
Dumping objects ->
{3835567} normal block at 0x000001B1D50EB180, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835556} normal block at 0x000001B1D50EB880, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835545} normal block at 0x000001B1D50EB500, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835534} normal block at 0x000001B1D50C4D00, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835523} normal block at 0x000001B1D50C4B40, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835492} normal block at 0x000001B1D6EE7B70, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835481} normal block at 0x000001B1D50B16D0, 255 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835478} normal block at 0x000001B1D50BDB50, 8 bytes long.
 Data: <  &#184;&#214;&#177;   > 00 00 B8 D6 B1 01 00 00 
{3834725} normal block at 0x000001B1D50B1450, 255 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833971} normal block at 0x000001B1D50BDB00, 8 bytes long.
 Data: <&#224;&#221; &#213;&#177;   > E0 DD 0A D5 B1 01 00 00 
..\zip\boinc_zip.cpp(122) : {317} normal block at 0x000001B1D50B1D10, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{302} normal block at 0x000001B1D50B2500, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{301} normal block at 0x000001B1D50C6420, 16 bytes long.
 Data: < v &#213;&#177;           > 18 76 0C D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x000001B1D50C66A0, 16 bytes long.
 Data: <&#240;u &#213;&#177;           > F0 75 0C D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x000001B1D50C0730, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{298} normal block at 0x000001B1D50C6880, 16 bytes long.
 Data: <&#200;u &#213;&#177;           > C8 75 0C D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001B1D50C6330, 16 bytes long.
 Data: <&#160;u &#213;&#177;           > A0 75 0C D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000001B1D50C6470, 16 bytes long.
 Data: <xu &#213;&#177;           > 78 75 0C D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001B1D50C65B0, 16 bytes long.
 Data: <Pu &#213;&#177;           > 50 75 0C D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001B1D50C47C0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{293} normal block at 0x000001B1D50C6560, 16 bytes long.
 Data: <8&#249; &#213;&#177;           > 38 F9 0A D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001B1D50C0970, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{291} normal block at 0x000001B1D50C7280, 16 bytes long.
 Data: < &#249; &#213;&#177;           > 10 F9 0A D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001B1D50C71E0, 16 bytes long.
 Data: <&#232;&#248; &#213;&#177;           > E8 F8 0A D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001B1D50C6380, 16 bytes long.
 Data: <&#192;&#248; &#213;&#177;           > C0 F8 0A D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001B1D50C7190, 16 bytes long.
 Data: < &#248; &#213;&#177;           > 98 F8 0A D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001B1D50C7140, 16 bytes long.
 Data: <p&#248; &#213;&#177;           > 70 F8 0A D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001B1D50C70F0, 16 bytes long.
 Data: <H&#248; &#213;&#177;           > 48 F8 0A D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001B1D50C0430, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{283} normal block at 0x000001B1D50C6A10, 16 bytes long.
 Data: < &#248; &#213;&#177;           > 20 F8 0A D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001B1D50AF820, 320 bytes long.
 Data: < j &#213;&#177;   0  &#213;&#177;   > 10 6A 0C D5 B1 01 00 00 30 04 0C D5 B1 01 00 00 
{281} normal block at 0x000001B1D50C6790, 16 bytes long.
 Data: <0u &#213;&#177;           > 30 75 0C D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001B1D50C6D30, 16 bytes long.
 Data: < u &#213;&#177;           > 08 75 0C D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001B1D50C0EB0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{278} normal block at 0x000001B1D50C6920, 16 bytes long.
 Data: <&#224;t &#213;&#177;           > E0 74 0C D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001B1D50C0610, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{276} normal block at 0x000001B1D50C6FB0, 16 bytes long.
 Data: <(t &#213;&#177;           > 28 74 0C D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001B1D50C7050, 16 bytes long.
 Data: < t &#213;&#177;           > 00 74 0C D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001B1D50C6CE0, 16 bytes long.
 Data: <&#216;s &#213;&#177;           > D8 73 0C D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001B1D50C6B50, 16 bytes long.
 Data: <&#176;s &#213;&#177;           > B0 73 0C D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001B1D50C69C0, 16 bytes long.
 Data: < s &#213;&#177;           > 88 73 0C D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001B1D50C70A0, 16 bytes long.
 Data: <`s &#213;&#177;           > 60 73 0C D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001B1D50C7000, 16 bytes long.
 Data: <&#224;F &#213;&#177;           > E0 46 0C D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001B1D50C46E0, 40 bytes long.
 Data: < p &#213;&#177;   p{&#238;&#214;&#177;   > 00 70 0C D5 B1 01 00 00 70 7B EE D6 B1 01 00 00 
{267} normal block at 0x000001B1D50C6F60, 16 bytes long.
 Data: <@s &#213;&#177;           > 40 73 0C D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001B1D50C6F10, 16 bytes long.
 Data: < s &#213;&#177;           > 18 73 0C D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001B1D50C0C10, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{264} normal block at 0x000001B1D50C6650, 16 bytes long.
 Data: <&#240;r &#213;&#177;           > F0 72 0C D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001B1D50C72F0, 992 bytes long.
 Data: <Pf &#213;&#177;      &#213;&#177;   > 50 66 0C D5 B1 01 00 00 10 0C 0C D5 B1 01 00 00 
{99} normal block at 0x000001B1D50C0AF0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{98} normal block at 0x000001B1D50BDD30, 16 bytes long.
 Data: <pM &#213;&#177;           > 70 4D 0C D5 B1 01 00 00 00 00 00 00 00 00 00 00 
{97} normal block at 0x000001B1D50C4D70, 40 bytes long.
 Data: <0&#221; &#213;&#177;   &#240;  &#213;&#177;   > 30 DD 0B D5 B1 01 00 00 F0 0A 0C D5 B1 01 00 00 
{76} normal block at 0x000001B1D50BE960, 16 bytes long.
 Data: < &#234;&#170;`&#247;           > 80 EA AA 60 F7 7F 00 00 00 00 00 00 00 00 00 00 
{75} normal block at 0x000001B1D50BE410, 16 bytes long.
 Data: <@&#233;&#170;`&#247;           > 40 E9 AA 60 F7 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x000001B1D50BE2D0, 16 bytes long.
 Data: <&#248;W&#167;`&#247;           > F8 57 A7 60 F7 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x000001B1D50BE0F0, 16 bytes long.
 Data: <&#216;W&#167;`&#247;           > D8 57 A7 60 F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x000001B1D50BE8C0, 16 bytes long.
 Data: <P &#167;`&#247;           > 50 04 A7 60 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000001B1D50BE820, 16 bytes long.
 Data: <0 &#167;`&#247;           > 30 04 A7 60 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001B1D50BE7D0, 16 bytes long.
 Data: <&#224; &#167;`&#247;           > E0 02 A7 60 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001B1D50BE870, 16 bytes long.
 Data: <  &#167;`&#247;           > 10 04 A7 60 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001B1D50BE730, 16 bytes long.
 Data: <p &#167;`&#247;           > 70 04 A7 60 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001B1D50BE6E0, 16 bytes long.
 Data: < &#192; `&#247;           > 18 C0 A5 60 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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