Task 38615357

Name p38_2_A15_A03_r0_2-QUICO_ATM_OpenFF_NAGL_p38_2-0-6-RND7652_0
Workunit 31567658
Created 17 Apr 2026, 16:49:03 UTC
Sent 17 Apr 2026, 17:03:14 UTC
Report deadline 22 Apr 2026, 17:03:14 UTC
Received 18 Apr 2026, 9:52:36 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 649732
Run time 6 hours 41 min 41 sec
CPU time 6 hours 41 min 6 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 54,075.75 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 676.95 MB
Peak swap size 6.98 GB
Peak disk usage 3.02 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
23:10:15 (1672): wrapper (7.9.26016): starting
23:10:15 (1672): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A15_A03_0.pdb
QB_A15_A03_0.xml
QB_A15_A03.inpcrd
QB_A15_A03_input.yaml
QB_A15_A03.pdb
QB_A15_A03.prmtop
QB_A15_A03_sys.xml
run.bat
run.sh
23:10:16 (1672): Library/usr/bin/tar.exe exited; CPU time 0.000000
23:10:16 (1672): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
05:51:37 (1672): C:/Windows/system32/cmd.exe exited; CPU time 24066.843750
05:51:37 (1672): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 375046405 bytes.
Dumping objects ->
{3835183} normal block at 0x000002B450AF5B00, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835172} normal block at 0x000002B450AF5E10, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835161} normal block at 0x000002B450AF5940, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835150} normal block at 0x000002B450AF5C50, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835139} normal block at 0x000002B450AF60B0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835108} normal block at 0x000002B45262B340, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835095} normal block at 0x000002B450AC5FE0, 8 bytes long.
 Data: <  &#170;P&#180;   > 00 00 AA 50 B4 02 00 00 
{3833945} normal block at 0x000002B450AC5F90, 8 bytes long.
 Data: <pURR&#180;   > 70 55 52 52 B4 02 00 00 
..\zip\boinc_zip.cpp(122) : {304} normal block at 0x000002B450ACF8D0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000002B450AB61B0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{288} normal block at 0x000002B450AD0D70, 16 bytes long.
 Data: < 0&#173;P&#180;           > 08 30 AD 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000002B450AD10E0, 16 bytes long.
 Data: <&#224;/&#173;P&#180;           > E0 2F AD 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000002B450ACBE90, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{285} normal block at 0x000002B450AD1310, 16 bytes long.
 Data: <&#184;/&#173;P&#180;           > B8 2F AD 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002B450AD1630, 16 bytes long.
 Data: < /&#173;P&#180;           > 90 2F AD 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002B450AD12C0, 16 bytes long.
 Data: <h/&#173;P&#180;           > 68 2F AD 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002B450AD1220, 16 bytes long.
 Data: <@/&#173;P&#180;           > 40 2F AD 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002B450ACA0F0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{280} normal block at 0x000002B450AD0C80, 16 bytes long.
 Data: < &#186;&#171;P&#180;           > 08 BA AB 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000002B450ACB650, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{278} normal block at 0x000002B450AD15E0, 16 bytes long.
 Data: <&#224;&#185;&#171;P&#180;           > E0 B9 AB 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000002B450AD0B40, 16 bytes long.
 Data: <&#184;&#185;&#171;P&#180;           > B8 B9 AB 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002B450AD1090, 16 bytes long.
 Data: < &#185;&#171;P&#180;           > 90 B9 AB 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002B450AD1130, 16 bytes long.
 Data: <h&#185;&#171;P&#180;           > 68 B9 AB 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002B450AD17C0, 16 bytes long.
 Data: <@&#185;&#171;P&#180;           > 40 B9 AB 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002B450AD0D20, 16 bytes long.
 Data: < &#185;&#171;P&#180;           > 18 B9 AB 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002B450ACC130, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{270} normal block at 0x000002B450AD1270, 16 bytes long.
 Data: <&#240;&#184;&#171;P&#180;           > F0 B8 AB 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002B450ABB8F0, 320 bytes long.
 Data: <p &#173;P&#180;   0&#193;&#172;P&#180;   > 70 12 AD 50 B4 02 00 00 30 C1 AC 50 B4 02 00 00 
{268} normal block at 0x000002B450AD0FA0, 16 bytes long.
 Data: < /&#173;P&#180;           > 20 2F AD 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002B450AD0B90, 16 bytes long.
 Data: <&#248;.&#173;P&#180;           > F8 2E AD 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000002B450ACC430, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{265} normal block at 0x000002B450AD0F00, 16 bytes long.
 Data: <&#208;.&#173;P&#180;           > D0 2E AD 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002B450ACB7D0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{263} normal block at 0x000002B450AD1450, 16 bytes long.
 Data: < .&#173;P&#180;           > 18 2E AD 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000002B450AD1040, 16 bytes long.
 Data: <&#240;-&#173;P&#180;           > F0 2D AD 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002B450AD11D0, 16 bytes long.
 Data: <&#200;-&#173;P&#180;           > C8 2D AD 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000002B450AD0BE0, 16 bytes long.
 Data: <&#160;-&#173;P&#180;           > A0 2D AD 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000002B450AD0960, 16 bytes long.
 Data: <x-&#173;P&#180;           > 78 2D AD 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000002B450AD0E60, 16 bytes long.
 Data: <P-&#173;P&#180;           > 50 2D AD 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000002B450AD0F50, 16 bytes long.
 Data: <&#192;&#165;&#172;P&#180;           > C0 A5 AC 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000002B450ACA5C0, 40 bytes long.
 Data: <P &#173;P&#180;   @&#179;bR&#180;   > 50 0F AD 50 B4 02 00 00 40 B3 62 52 B4 02 00 00 
{254} normal block at 0x000002B450AD1590, 16 bytes long.
 Data: <0-&#173;P&#180;           > 30 2D AD 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x000002B450AD0CD0, 16 bytes long.
 Data: < -&#173;P&#180;           > 08 2D AD 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x000002B450ACC010, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{251} normal block at 0x000002B450AD0E10, 16 bytes long.
 Data: <&#224;,&#173;P&#180;           > E0 2C AD 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{250} normal block at 0x000002B450AD2CE0, 992 bytes long.
 Data: <  &#173;P&#180;    &#192;&#172;P&#180;   > 10 0E AD 50 B4 02 00 00 10 C0 AC 50 B4 02 00 00 
{86} normal block at 0x000002B450ACBFB0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{85} normal block at 0x000002B450AC5540, 16 bytes long.
 Data: < &#167;&#172;P&#180;           > 80 A7 AC 50 B4 02 00 00 00 00 00 00 00 00 00 00 
{84} normal block at 0x000002B450ACA780, 40 bytes long.
 Data: <@U&#172;P&#180;   &#176;&#191;&#172;P&#180;   > 40 55 AC 50 B4 02 00 00 B0 BF AC 50 B4 02 00 00 
{63} normal block at 0x000002B450AC5630, 16 bytes long.
 Data: < &#234;&#156;g&#247;           > 80 EA 9C 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000002B450AC5900, 16 bytes long.
 Data: <@&#233;&#156;g&#247;           > 40 E9 9C 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000002B450AC5F40, 16 bytes long.
 Data: <&#248;W g&#247;           > F8 57 99 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000002B450AC56D0, 16 bytes long.
 Data: <&#216;W g&#247;           > D8 57 99 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000002B450AC5AE0, 16 bytes long.
 Data: <P  g&#247;           > 50 04 99 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000002B450AC5D60, 16 bytes long.
 Data: <0  g&#247;           > 30 04 99 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000002B450AC5D10, 16 bytes long.
 Data: <&#224;  g&#247;           > E0 02 99 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x000002B450AC6120, 16 bytes long.
 Data: <   g&#247;           > 10 04 99 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x000002B450AC5CC0, 16 bytes long.
 Data: <p  g&#247;           > 70 04 99 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
{54} normal block at 0x000002B450AC5C70, 16 bytes long.
 Data: < &#192;&#151;g&#247;           > 18 C0 97 67 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


©2026 Universitat Pompeu Fabra