Task 38613090

Name CDK2_A14_A11_r0_4-QUICO_ATM_OpenFF_CDK2-3-6-RND7453_1
Workunit 31565031
Created 16 Apr 2026, 15:49:45 UTC
Sent 16 Apr 2026, 15:49:50 UTC
Report deadline 21 Apr 2026, 15:49:50 UTC
Received 17 Apr 2026, 0:37:57 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 603954
Run time 8 hours 46 min 50 sec
CPU time 8 hours 8 min
Validate state Valid
Credit 750,000.00
Device peak FLOPS 33,169.07 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 798.74 MB
Peak swap size 13.12 GB
Peak disk usage 3.14 GB

Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
08:51:10 (14244): wrapper (7.9.26016): starting
08:51:10 (14244): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A14_A11_0.pdb
QB_A14_A11_0.xml
QB_A14_A11.inpcrd
QB_A14_A11_input.yaml
QB_A14_A11.pdb
QB_A14_A11.prmtop
QB_A14_A11_sys.xml
run.bat
run.sh
08:51:12 (14244): Library/usr/bin/tar.exe exited; CPU time 0.000000
08:51:12 (14244): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
17:37:08 (14244): C:/Windows/system32/cmd.exe exited; CPU time 29280.812500
17:37:08 (14244): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 442425141 bytes.
Dumping objects ->
{3835273} normal block at 0x000001E4748D78E0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835262} normal block at 0x000001E4748D7D40, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835251} normal block at 0x000001E4748D7640, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835240} normal block at 0x000001E4748D79C0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835229} normal block at 0x000001E4748D7DB0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835198} normal block at 0x000001E47487C480, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835185} normal block at 0x000001E472BCAEE0, 8 bytes long.
 Data: <  ft&#228;   > 00 00 66 74 E4 01 00 00 
{3833951} normal block at 0x000001E472BCB930, 8 bytes long.
 Data: <P&#234;}t&#228;   > 50 EA 7D 74 E4 01 00 00 
..\zip\boinc_zip.cpp(122) : {307} normal block at 0x000001E472BBFED0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001E472BBAA90, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{291} normal block at 0x000001E472BD3ED0, 16 bytes long.
 Data: <hB&#189;r&#228;           > 68 42 BD 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001E472BD3BB0, 16 bytes long.
 Data: <@B&#189;r&#228;           > 40 42 BD 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001E472BCEF00, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{288} normal block at 0x000001E472BD30C0, 16 bytes long.
 Data: < B&#189;r&#228;           > 18 42 BD 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001E472BD3250, 16 bytes long.
 Data: <&#240;A&#189;r&#228;           > F0 41 BD 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001E472BD31B0, 16 bytes long.
 Data: <&#200;A&#189;r&#228;           > C8 41 BD 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001E472BD3570, 16 bytes long.
 Data: <&#160;A&#189;r&#228;           > A0 41 BD 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001E472BCD2F0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{283} normal block at 0x000001E472BD33E0, 16 bytes long.
 Data: <X&#224;&#188;r&#228;           > 58 E0 BC 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001E472BCED20, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{281} normal block at 0x000001E472BD3C50, 16 bytes long.
 Data: <0&#224;&#188;r&#228;           > 30 E0 BC 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001E472BD3700, 16 bytes long.
 Data: < &#224;&#188;r&#228;           > 08 E0 BC 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001E472BD3E80, 16 bytes long.
 Data: <&#224;&#223;&#188;r&#228;           > E0 DF BC 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001E472BD3DE0, 16 bytes long.
 Data: <&#184;&#223;&#188;r&#228;           > B8 DF BC 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001E472BD3430, 16 bytes long.
 Data: < &#223;&#188;r&#228;           > 90 DF BC 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001E472BD35C0, 16 bytes long.
 Data: <h&#223;&#188;r&#228;           > 68 DF BC 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001E472BCE5A0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{273} normal block at 0x000001E472BD3E30, 16 bytes long.
 Data: <@&#223;&#188;r&#228;           > 40 DF BC 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001E472BCDF40, 320 bytes long.
 Data: <0>&#189;r&#228;   &#160;&#229;&#188;r&#228;   > 30 3E BD 72 E4 01 00 00 A0 E5 BC 72 E4 01 00 00 
{271} normal block at 0x000001E472BD3020, 16 bytes long.
 Data: < A&#189;r&#228;           > 80 41 BD 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001E472BD3B10, 16 bytes long.
 Data: <XA&#189;r&#228;           > 58 41 BD 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001E472BCE540, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{268} normal block at 0x000001E472BD3A70, 16 bytes long.
 Data: <0A&#189;r&#228;           > 30 41 BD 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001E472BCF2C0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{266} normal block at 0x000001E472BD2F80, 16 bytes long.
 Data: <x@&#189;r&#228;           > 78 40 BD 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001E472BD3660, 16 bytes long.
 Data: <P@&#189;r&#228;           > 50 40 BD 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001E472BD3D90, 16 bytes long.
 Data: <(@&#189;r&#228;           > 28 40 BD 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001E472BD34D0, 16 bytes long.
 Data: < @&#189;r&#228;           > 00 40 BD 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001E472BD3110, 16 bytes long.
 Data: <&#216;?&#189;r&#228;           > D8 3F BD 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001E472BD37A0, 16 bytes long.
 Data: <&#176;?&#189;r&#228;           > B0 3F BD 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001E472BD3160, 16 bytes long.
 Data: <p&#207;&#188;r&#228;           > 70 CF BC 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001E472BCCF70, 40 bytes long.
 Data: <`1&#189;r&#228;    &#196;&#135;t&#228;   > 60 31 BD 72 E4 01 00 00 80 C4 87 74 E4 01 00 00 
{257} normal block at 0x000001E472BD3CF0, 16 bytes long.
 Data: < ?&#189;r&#228;           > 90 3F BD 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000001E472BD3D40, 16 bytes long.
 Data: <h?&#189;r&#228;           > 68 3F BD 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000001E472BCE420, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{254} normal block at 0x000001E472BD3520, 16 bytes long.
 Data: <@?&#189;r&#228;           > 40 3F BD 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x000001E472BD3F40, 992 bytes long.
 Data: < 5&#189;r&#228;    &#228;&#188;r&#228;   > 20 35 BD 72 E4 01 00 00 20 E4 BC 72 E4 01 00 00 
{89} normal block at 0x000001E472BCF200, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{88} normal block at 0x000001E472BCB8E0, 16 bytes long.
 Data: < &#213;&#188;r&#228;           > 90 D5 BC 72 E4 01 00 00 00 00 00 00 00 00 00 00 
{87} normal block at 0x000001E472BCD590, 40 bytes long.
 Data: <&#224;&#184;&#188;r&#228;    &#242;&#188;r&#228;   > E0 B8 BC 72 E4 01 00 00 00 F2 BC 72 E4 01 00 00 
{66} normal block at 0x000001E472BCB2A0, 16 bytes long.
 Data: < &#234; (&#247;           > 80 EA 17 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001E472BCAE90, 16 bytes long.
 Data: <@&#233; (&#247;           > 40 E9 17 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001E472BCB980, 16 bytes long.
 Data: <&#248;W (&#247;           > F8 57 14 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001E472BCB160, 16 bytes long.
 Data: <&#216;W (&#247;           > D8 57 14 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001E472BCB1B0, 16 bytes long.
 Data: <P  (&#247;           > 50 04 14 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001E472BCBAC0, 16 bytes long.
 Data: <0  (&#247;           > 30 04 14 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001E472BCADA0, 16 bytes long.
 Data: <&#224;  (&#247;           > E0 02 14 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000001E472BCB890, 16 bytes long.
 Data: <   (&#247;           > 10 04 14 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000001E472BCAD50, 16 bytes long.
 Data: <p  (&#247;           > 70 04 14 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000001E472BCB750, 16 bytes long.
 Data: < &#192; (&#247;           > 18 C0 12 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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