Task 38612780

Name JNK1_A10_A16_r0_5-QUICO_ATM_OpenFF_JNK1-3-6-RND1619_0
Workunit 31565353
Created 16 Apr 2026, 11:41:05 UTC
Sent 16 Apr 2026, 11:41:12 UTC
Report deadline 21 Apr 2026, 11:41:12 UTC
Received 16 Apr 2026, 21:17:15 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 606440
Run time 9 hours 17 min 42 sec
CPU time 8 hours 39 min 16 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 6,468.02 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 622.17 MB
Peak swap size 3.70 GB
Peak disk usage 3.07 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
04:50:18 (15720): wrapper (7.9.26016): starting
04:50:18 (15720): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A10_A16_0.pdb
QB_A10_A16_0.xml
QB_A10_A16.inpcrd
QB_A10_A16_input.yaml
QB_A10_A16.pdb
QB_A10_A16.prmtop
QB_A10_A16_sys.xml
run.bat
run.sh
04:50:21 (15720): Library/usr/bin/tar.exe exited; CPU time 0.000000
04:50:21 (15720): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'G:\ProgramData1\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'G:\ProgramData1\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
14:16:11 (15720): C:/Windows/system32/cmd.exe exited; CPU time 31156.875000
14:16:11 (15720): called boinc_finish(0)
0 bytes in 0 Free Blocks.
536 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 458533555 bytes.
Dumping objects ->
{3835219} normal block at 0x00000281B9C16060, 48 bytes long.
 Data: <PATH=G:\ProgramD> 50 41 54 48 3D 47 3A 5C 50 72 6F 67 72 61 6D 44 
{3835208} normal block at 0x00000281B9C16450, 48 bytes long.
 Data: <HOME=G:\ProgramD> 48 4F 4D 45 3D 47 3A 5C 50 72 6F 67 72 61 6D 44 
{3835197} normal block at 0x00000281B9C16220, 48 bytes long.
 Data: <TMP=G:\ProgramDa> 54 4D 50 3D 47 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835186} normal block at 0x00000281B9C16610, 48 bytes long.
 Data: <TEMP=G:\ProgramD> 54 45 4D 50 3D 47 3A 5C 50 72 6F 67 72 61 6D 44 
{3835175} normal block at 0x00000281B9C16140, 48 bytes long.
 Data: <TMPDIR=G:\Progra> 54 4D 50 44 49 52 3D 47 3A 5C 50 72 6F 67 72 61 
{3835144} normal block at 0x00000281BB845630, 64 bytes long.
 Data: <PATH=G:\ProgramD> 50 41 54 48 3D 47 3A 5C 50 72 6F 67 72 61 6D 44 
{3835133} normal block at 0x00000281B9C5EBB0, 140 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835130} normal block at 0x00000281B9C0DAC0, 8 bytes long.
 Data: <   &#186;    > 00 00 1D BA 81 02 00 00 
{3834526} normal block at 0x00000281B9C5F710, 140 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833941} normal block at 0x00000281B9C0D6B0, 8 bytes long.
 Data: < &#213;&#191;&#185;    > 00 D5 BF B9 81 02 00 00 
..\zip\boinc_zip.cpp(122) : {302} normal block at 0x00000281B9C011B0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x00000281B9C021C0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{286} normal block at 0x00000281B9C14C30, 16 bytes long.
 Data: <&#200;]&#193;&#185;            > C8 5D C1 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000281B9C15130, 16 bytes long.
 Data: <&#160;]&#193;&#185;            > A0 5D C1 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000281B9C10A60, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{283} normal block at 0x00000281B9C148C0, 16 bytes long.
 Data: <x]&#193;&#185;            > 78 5D C1 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000281B9C14C80, 16 bytes long.
 Data: <P]&#193;&#185;            > 50 5D C1 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000281B9C155E0, 16 bytes long.
 Data: <(]&#193;&#185;            > 28 5D C1 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000281B9C14A00, 16 bytes long.
 Data: < ]&#193;&#185;            > 00 5D C1 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000281B9C16370, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{278} normal block at 0x00000281B9C14E10, 16 bytes long.
 Data: <8 &#192;&#185;            > 38 05 C0 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000281B9C10520, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{276} normal block at 0x00000281B9C14870, 16 bytes long.
 Data: <  &#192;&#185;            > 10 05 C0 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000281B9C14AA0, 16 bytes long.
 Data: <&#232; &#192;&#185;            > E8 04 C0 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000281B9C14820, 16 bytes long.
 Data: <&#192; &#192;&#185;            > C0 04 C0 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000281B9C14D20, 16 bytes long.
 Data: <  &#192;&#185;            > 98 04 C0 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000281B9C15450, 16 bytes long.
 Data: <p &#192;&#185;            > 70 04 C0 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000281B9C14A50, 16 bytes long.
 Data: <H &#192;&#185;            > 48 04 C0 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000281B9C106A0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{268} normal block at 0x00000281B9C146E0, 16 bytes long.
 Data: <  &#192;&#185;            > 20 04 C0 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000281B9C00420, 320 bytes long.
 Data: <&#224;F&#193;&#185;    &#160; &#193;&#185;    > E0 46 C1 B9 81 02 00 00 A0 06 C1 B9 81 02 00 00 
{266} normal block at 0x00000281B9C150E0, 16 bytes long.
 Data: <&#224;\&#193;&#185;            > E0 5C C1 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000281B9C153B0, 16 bytes long.
 Data: <&#184;\&#193;&#185;            > B8 5C C1 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000281B9C11060, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{263} normal block at 0x00000281B9C14F00, 16 bytes long.
 Data: < \&#193;&#185;            > 90 5C C1 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000281B9C109A0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{261} normal block at 0x00000281B9C15630, 16 bytes long.
 Data: <&#216;[&#193;&#185;            > D8 5B C1 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x00000281B9C147D0, 16 bytes long.
 Data: <&#176;[&#193;&#185;            > B0 5B C1 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x00000281B9C15220, 16 bytes long.
 Data: < [&#193;&#185;            > 88 5B C1 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x00000281B9C14F50, 16 bytes long.
 Data: <`[&#193;&#185;            > 60 5B C1 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x00000281B9C15400, 16 bytes long.
 Data: <8[&#193;&#185;            > 38 5B C1 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x00000281B9C149B0, 16 bytes long.
 Data: < [&#193;&#185;            > 10 5B C1 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x00000281B9C14960, 16 bytes long.
 Data: <@&#236;&#191;&#185;            > 40 EC BF B9 81 02 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x00000281B9BFEC40, 40 bytes long.
 Data: <`I&#193;&#185;    0V&#132;&#187;    > 60 49 C1 B9 81 02 00 00 30 56 84 BB 81 02 00 00 
{252} normal block at 0x00000281B9C154A0, 16 bytes long.
 Data: <&#240;Z&#193;&#185;            > F0 5A C1 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{251} normal block at 0x00000281B9C14D70, 16 bytes long.
 Data: <&#200;Z&#193;&#185;            > C8 5A C1 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{250} normal block at 0x00000281B9C11000, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{249} normal block at 0x00000281B9C154F0, 16 bytes long.
 Data: <&#160;Z&#193;&#185;            > A0 5A C1 B9 81 02 00 00 00 00 00 00 00 00 00 00 
{248} normal block at 0x00000281B9C15AA0, 992 bytes long.
 Data: <&#240;T&#193;&#185;      &#193;&#185;    > F0 54 C1 B9 81 02 00 00 00 10 C1 B9 81 02 00 00 
{84} normal block at 0x00000281B9C10B80, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{83} normal block at 0x00000281B9C0DC50, 16 bytes long.
 Data: < &#196;&#191;&#185;            > 00 C4 BF B9 81 02 00 00 00 00 00 00 00 00 00 00 
{82} normal block at 0x00000281B9BFC400, 40 bytes long.
 Data: <P&#220;&#192;&#185;      &#193;&#185;    > 50 DC C0 B9 81 02 00 00 80 0B C1 B9 81 02 00 00 
{61} normal block at 0x00000281B9C0D5C0, 16 bytes long.
 Data: < &#234;)6&#247;           > 80 EA 29 36 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x00000281B9C0D200, 16 bytes long.
 Data: <@&#233;)6&#247;           > 40 E9 29 36 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x00000281B9C0D7F0, 16 bytes long.
 Data: <&#248;W&6&#247;           > F8 57 26 36 F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x00000281B9C0CE40, 16 bytes long.
 Data: <&#216;W&6&#247;           > D8 57 26 36 F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x00000281B9C0CDF0, 16 bytes long.
 Data: <P &6&#247;           > 50 04 26 36 F7 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x00000281B9C0D660, 16 bytes long.
 Data: <0 &6&#247;           > 30 04 26 36 F7 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x00000281B9C0CDA0, 16 bytes long.
 Data: <&#224; &6&#247;           > E0 02 26 36 F7 7F 00 00 00 00 00 00 00 00 00 00 
{54} normal block at 0x00000281B9C0DB10, 16 bytes long.
 Data: <  &6&#247;           > 10 04 26 36 F7 7F 00 00 00 00 00 00 00 00 00 00 
{53} normal block at 0x00000281B9C0D160, 16 bytes long.
 Data: <p &6&#247;           > 70 04 26 36 F7 7F 00 00 00 00 00 00 00 00 00 00 
{52} normal block at 0x00000281B9C0D1B0, 16 bytes long.
 Data: < &#192;$6&#247;           > 18 C0 24 36 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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