Task 38612016

Name p38_A18_A08_r0_2-QUICO_ATM_OpenFF_p38-3-6-RND2906_0
Workunit 31564668
Created 16 Apr 2026, 2:03:11 UTC
Sent 16 Apr 2026, 2:03:17 UTC
Report deadline 21 Apr 2026, 2:03:17 UTC
Received 16 Apr 2026, 16:42:02 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 651346
Run time 7 hours 45 min 49 sec
CPU time 7 hours 33 min 39 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 29,331.45 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 670.93 MB
Peak swap size 12.95 GB
Peak disk usage 3.08 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:35:10 (3372): wrapper (7.9.26016): starting
03:35:10 (3372): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A18_A08_0.pdb
QB_A18_A08_0.xml
QB_A18_A08.inpcrd
QB_A18_A08_input.yaml
QB_A18_A08.pdb
QB_A18_A08.prmtop
QB_A18_A08_sys.xml
run.bat
run.sh
03:35:11 (3372): Library/usr/bin/tar.exe exited; CPU time 0.000000
03:35:11 (3372): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
11:20:12 (3372): C:/Windows/system32/cmd.exe exited; CPU time 27219.859375
11:20:12 (3372): called boinc_finish(0)
0 bytes in 0 Free Blocks.
726 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 330461633 bytes.
Dumping objects ->
{3835568} normal block at 0x000002242DDD2C60, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835557} normal block at 0x000002242DDD2E20, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835546} normal block at 0x000002242DDD3280, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835535} normal block at 0x000002242DDD2DB0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835524} normal block at 0x000002242DDD2BF0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835493} normal block at 0x000002242FA87D40, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835482} normal block at 0x000002242DDBF5A0, 235 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835479} normal block at 0x000002242DDCD0F0, 8 bytes long.
 Data: <   .$   > 00 00 19 2E 24 02 00 00 
{3834703} normal block at 0x000002242DDBF6D0, 235 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833955} normal block at 0x000002242DDCD9B0, 8 bytes long.
 Data: < 5&#174;/$   > 20 35 AE 2F 24 02 00 00 
..\zip\boinc_zip.cpp(122) : {309} normal block at 0x000002242DDC12D0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000002242DDC1780, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{293} normal block at 0x000002242DDD42F0, 16 bytes long.
 Data: <&#216;O&#221;-$           > D8 4F DD 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000002242DDD3DF0, 16 bytes long.
 Data: <&#176;O&#221;-$           > B0 4F DD 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000002242DDD1040, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{290} normal block at 0x000002242DDD3EE0, 16 bytes long.
 Data: < O&#221;-$           > 88 4F DD 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000002242DDD42A0, 16 bytes long.
 Data: <`O&#221;-$           > 60 4F DD 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000002242DDD41B0, 16 bytes long.
 Data: <8O&#221;-$           > 38 4F DD 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000002242DDD4660, 16 bytes long.
 Data: < O&#221;-$           > 10 4F DD 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000002242DDBC470, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{285} normal block at 0x000002242DDD40C0, 16 bytes long.
 Data: <8&#242;&#219;-$           > 38 F2 DB 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002242DDD0B00, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{283} normal block at 0x000002242DDD4070, 16 bytes long.
 Data: < &#242;&#219;-$           > 10 F2 DB 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002242DDD3B20, 16 bytes long.
 Data: <&#232;&#241;&#219;-$           > E8 F1 DB 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000002242DDD3A80, 16 bytes long.
 Data: <&#192;&#241;&#219;-$           > C0 F1 DB 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000002242DDD3FD0, 16 bytes long.
 Data: < &#241;&#219;-$           > 98 F1 DB 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000002242DDD3990, 16 bytes long.
 Data: <p&#241;&#219;-$           > 70 F1 DB 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000002242DDD4610, 16 bytes long.
 Data: <H&#241;&#219;-$           > 48 F1 DB 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000002242DDD1160, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{275} normal block at 0x000002242DDD3D00, 16 bytes long.
 Data: < &#241;&#219;-$           > 20 F1 DB 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002242DDBF120, 320 bytes long.
 Data: < =&#221;-$   ` &#221;-$   > 00 3D DD 2D 24 02 00 00 60 11 DD 2D 24 02 00 00 
{273} normal block at 0x000002242DDD4570, 16 bytes long.
 Data: <&#240;N&#221;-$           > F0 4E DD 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002242DDD44D0, 16 bytes long.
 Data: <&#200;N&#221;-$           > C8 4E DD 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002242DDD05C0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{270} normal block at 0x000002242DDD3C10, 16 bytes long.
 Data: <&#160;N&#221;-$           > A0 4E DD 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002242DDD12E0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{268} normal block at 0x000002242DDD4840, 16 bytes long.
 Data: <&#232;M&#221;-$           > E8 4D DD 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002242DDD45C0, 16 bytes long.
 Data: <&#192;M&#221;-$           > C0 4D DD 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000002242DDD3E90, 16 bytes long.
 Data: < M&#221;-$           > 98 4D DD 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000002242DDD3AD0, 16 bytes long.
 Data: <pM&#221;-$           > 70 4D DD 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002242DDD4020, 16 bytes long.
 Data: <HM&#221;-$           > 48 4D DD 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000002242DDD4750, 16 bytes long.
 Data: < M&#221;-$           > 20 4D DD 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002242DDD3940, 16 bytes long.
 Data: < &#226;&#219;-$           > 10 E2 DB 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000002242DDBE210, 40 bytes long.
 Data: <@9&#221;-$   @}&#168;/$   > 40 39 DD 2D 24 02 00 00 40 7D A8 2F 24 02 00 00 
{259} normal block at 0x000002242DDD46B0, 16 bytes long.
 Data: < M&#221;-$           > 00 4D DD 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000002242DDD4520, 16 bytes long.
 Data: <&#216;L&#221;-$           > D8 4C DD 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x000002242DDD1280, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{256} normal block at 0x000002242DDD3A30, 16 bytes long.
 Data: <&#176;L&#221;-$           > B0 4C DD 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000002242DDD4CB0, 992 bytes long.
 Data: <0:&#221;-$     &#221;-$   > 30 3A DD 2D 24 02 00 00 80 12 DD 2D 24 02 00 00 
{91} normal block at 0x000002242DDD1220, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{90} normal block at 0x000002242DDCD820, 16 bytes long.
 Data: < &#174;&#219;-$           > 80 AE DB 2D 24 02 00 00 00 00 00 00 00 00 00 00 
{89} normal block at 0x000002242DDBAE80, 40 bytes long.
 Data: < &#216;&#220;-$     &#221;-$   > 20 D8 DC 2D 24 02 00 00 20 12 DD 2D 24 02 00 00 
{68} normal block at 0x000002242DDCD5F0, 16 bytes long.
 Data: < &#234;&#147;&#217;&#247;           > 80 EA 93 D9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000002242DDCD550, 16 bytes long.
 Data: <@&#233;&#147;&#217;&#247;           > 40 E9 93 D9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000002242DDCD5A0, 16 bytes long.
 Data: <&#248;W &#217;&#247;           > F8 57 90 D9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000002242DDCD370, 16 bytes long.
 Data: <&#216;W &#217;&#247;           > D8 57 90 D9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000002242DDCD8C0, 16 bytes long.
 Data: <P  &#217;&#247;           > 50 04 90 D9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000002242DDCD690, 16 bytes long.
 Data: <0  &#217;&#247;           > 30 04 90 D9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000002242DDCD780, 16 bytes long.
 Data: <&#224;  &#217;&#247;           > E0 02 90 D9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000002242DDCDC30, 16 bytes long.
 Data: <   &#217;&#247;           > 10 04 90 D9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000002242DDCD140, 16 bytes long.
 Data: <p  &#217;&#247;           > 70 04 90 D9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000002242DDCD960, 16 bytes long.
 Data: < &#192;&#142;&#217;&#247;           > 18 C0 8E D9 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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