Task 38611525

Name CDK2_A16_A10_r0_1-QUICO_ATM_OpenFF_CDK2-4-6-RND9494_1
Workunit 31564229
Created 15 Apr 2026, 20:28:48 UTC
Sent 15 Apr 2026, 20:28:54 UTC
Report deadline 20 Apr 2026, 20:28:54 UTC
Received 16 Apr 2026, 11:07:52 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 640711
Run time 12 hours 43 min 16 sec
CPU time 12 hours 43 min 16 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 2,856.42 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 760.82 MB
Peak swap size 6.81 GB
Peak disk usage 3.59 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
16:44:08 (7752): wrapper (7.9.26016): starting
16:44:08 (7752): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A16_A10_0.pdb
QB_A16_A10_0.xml
QB_A16_A10.inpcrd
QB_A16_A10_input.yaml
QB_A16_A10.pdb
QB_A16_A10.prmtop
QB_A16_A10_sys.xml
run.bat
run.sh
16:44:10 (7752): Library/usr/bin/tar.exe exited; CPU time 0.000000
16:44:10 (7752): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\3\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\3\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
21:04:06 (7752): C:/Windows/system32/cmd.exe exited; CPU time 14962.906250
21:04:06 (7752): app exit status: 0x40010004
21:04:06 (7752): called boinc_finish(195)
21:05:32 (18732): wrapper (7.9.26016): starting
21:05:32 (18732): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\3\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
07:06:54 (18732): C:/Windows/system32/cmd.exe exited; CPU time 34614.796875
07:06:54 (18732): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 575095206 bytes.
Dumping objects ->
{1641} normal block at 0x000001EACC745380, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1630} normal block at 0x000001EACC7451C0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1619} normal block at 0x000001EACC745070, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{1608} normal block at 0x000001EACC7452A0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1597} normal block at 0x000001EACC7450E0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{1566} normal block at 0x000001EACC7302F0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1555} normal block at 0x000001EACC745A30, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {1552} normal block at 0x000001EACC7462B0, 8 bytes long.
 Data: <        > 00 00 B2 CC EA 01 00 00 
{922} normal block at 0x000001EACC72ECD0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{311} normal block at 0x000001EACC7463A0, 8 bytes long.
 Data: < ot     > 10 6F 74 CC EA 01 00 00 
{302} normal block at 0x000001EACC732970, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{301} normal block at 0x000001EACC746260, 16 bytes long.
 Data: < nt             > 18 6E 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x000001EACC746490, 16 bytes long.
 Data: < mt             > F0 6D 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x000001EACC73FD30, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{298} normal block at 0x000001EACC745D10, 16 bytes long.
 Data: < mt             > C8 6D 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001EACC745BD0, 16 bytes long.
 Data: < mt             > A0 6D 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000001EACC746850, 16 bytes long.
 Data: <xmt             > 78 6D 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001EACC746440, 16 bytes long.
 Data: <Pmt             > 50 6D 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001EACC744D60, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{293} normal block at 0x000001EACC745E00, 16 bytes long.
 Data: < Yt             > C8 59 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001EACC740450, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{291} normal block at 0x000001EACC746350, 16 bytes long.
 Data: < Yt             > A0 59 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001EACC7463F0, 16 bytes long.
 Data: <xYt             > 78 59 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001EACC746800, 16 bytes long.
 Data: <PYt             > 50 59 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001EACC745FE0, 16 bytes long.
 Data: <(Yt             > 28 59 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001EACC745E50, 16 bytes long.
 Data: < Yt             > 00 59 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001EACC7469E0, 16 bytes long.
 Data: < Xt             > D8 58 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001EACC740810, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{283} normal block at 0x000001EACC746300, 16 bytes long.
 Data: < Xt             > B0 58 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001EACC7458B0, 320 bytes long.
 Data: < ct       t     > 00 63 74 CC EA 01 00 00 10 08 74 CC EA 01 00 00 
{281} normal block at 0x000001EACC746670, 16 bytes long.
 Data: <0mt             > 30 6D 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001EACC745F40, 16 bytes long.
 Data: < mt             > 08 6D 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001EACC73FCD0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{278} normal block at 0x000001EACC746710, 16 bytes long.
 Data: < lt             > E0 6C 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001EACC7405D0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{276} normal block at 0x000001EACC7468A0, 16 bytes long.
 Data: <(lt             > 28 6C 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001EACC745EF0, 16 bytes long.
 Data: < lt             > 00 6C 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001EACC746210, 16 bytes long.
 Data: < kt             > D8 6B 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001EACC746620, 16 bytes long.
 Data: < kt             > B0 6B 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001EACC7461C0, 16 bytes long.
 Data: < kt             > 88 6B 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001EACC746580, 16 bytes long.
 Data: <`kt             > 60 6B 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001EACC7464E0, 16 bytes long.
 Data: < St             > 10 53 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001EACC745310, 40 bytes long.
 Data: < dt       s     > E0 64 74 CC EA 01 00 00 F0 02 73 CC EA 01 00 00 
{267} normal block at 0x000001EACC7466C0, 16 bytes long.
 Data: <@kt             > 40 6B 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001EACC745B30, 16 bytes long.
 Data: < kt             > 18 6B 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001EACC73FBB0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{264} normal block at 0x000001EACC745EA0, 16 bytes long.
 Data: < jt             > F0 6A 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001EACC746AF0, 992 bytes long.
 Data: < ^t       s     > A0 5E 74 CC EA 01 00 00 B0 FB 73 CC EA 01 00 00 
{99} normal block at 0x000001EACC740030, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{98} normal block at 0x000001EACC73E340, 16 bytes long.
 Data: < Ot             > 90 4F 74 CC EA 01 00 00 00 00 00 00 00 00 00 00 
{97} normal block at 0x000001EACC744F90, 40 bytes long.
 Data: <@ s     0 t     > 40 E3 73 CC EA 01 00 00 30 00 74 CC EA 01 00 00 
{76} normal block at 0x000001EACC73DFD0, 16 bytes long.
 Data: <   ?            > 80 EA 0A 3F F7 7F 00 00 00 00 00 00 00 00 00 00 
{75} normal block at 0x000001EACC73E2F0, 16 bytes long.
 Data: <@  ?            > 40 E9 0A 3F F7 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x000001EACC73DE40, 16 bytes long.
 Data: < W ?            > F8 57 07 3F F7 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x000001EACC73DF30, 16 bytes long.
 Data: < W ?            > D8 57 07 3F F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x000001EACC73D850, 16 bytes long.
 Data: <P  ?            > 50 04 07 3F F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000001EACC73DEE0, 16 bytes long.
 Data: <0  ?            > 30 04 07 3F F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001EACC73E070, 16 bytes long.
 Data: <   ?            > E0 02 07 3F F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001EACC73DDF0, 16 bytes long.
 Data: <   ?            > 10 04 07 3F F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001EACC73E020, 16 bytes long.
 Data: <p  ?            > 70 04 07 3F F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001EACC73DCB0, 16 bytes long.
 Data: <   ?            > 18 C0 05 3F F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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