Task 38607345

Name MCL1_A25_A18_r0_4-QUICO_ATM_OpenFF_MCL1-0-6-RND2927_3
Workunit 31560384
Created 14 Apr 2026, 9:24:55 UTC
Sent 14 Apr 2026, 9:25:27 UTC
Report deadline 19 Apr 2026, 9:25:27 UTC
Received 14 Apr 2026, 13:17:16 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 644455
Run time 3 hours 47 min 42 sec
CPU time 3 hours 25 min 30 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 12,961.32 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 467.82 MB
Peak swap size 5.01 GB
Peak disk usage 2.89 GB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
05:27:21 (32696): wrapper (7.9.26016): starting
05:27:21 (32696): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A25_A18_0.pdb
QB_A25_A18_0.xml
QB_A25_A18.inpcrd
QB_A25_A18_input.yaml
QB_A25_A18.pdb
QB_A25_A18.prmtop
QB_A25_A18_sys.xml
run.bat
run.sh
05:27:23 (32696): Library/usr/bin/tar.exe exited; CPU time 0.000000
05:27:23 (32696): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
09:16:51 (32696): C:/Windows/system32/cmd.exe exited; CPU time 12330.906250
09:16:51 (32696): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 205142325 bytes.
Dumping objects ->
{3835507} normal block at 0x000001B7F20F5550, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835496} normal block at 0x000001B7F20F5A20, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835485} normal block at 0x000001B7F20F5470, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835474} normal block at 0x000001B7F20F5080, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835463} normal block at 0x000001B7EEA079E0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835432} normal block at 0x000001B7F206B5F0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835419} normal block at 0x000001B7EEA0EE30, 8 bytes long.
 Data: <   &#239;&#183;   > 00 00 08 EF B7 01 00 00 
{3833955} normal block at 0x000001B7EEA0EB60, 8 bytes long.
 Data: <P&#214;&#158;&#238;&#183;   > 50 D6 9E EE B7 01 00 00 
..\zip\boinc_zip.cpp(122) : {309} normal block at 0x000001B7EE9F1030, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001B7EE9F2110, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{293} normal block at 0x000001B7EEA0ED40, 16 bytes long.
 Data: <x&#233;&#160;&#238;&#183;           > 78 E9 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001B7EEA0F100, 16 bytes long.
 Data: <P&#233;&#160;&#238;&#183;           > 50 E9 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001B7EEA08D20, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{290} normal block at 0x000001B7EEA0F330, 16 bytes long.
 Data: <(&#233;&#160;&#238;&#183;           > 28 E9 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001B7EEA0EDE0, 16 bytes long.
 Data: < &#233;&#160;&#238;&#183;           > 00 E9 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001B7EEA0F3D0, 16 bytes long.
 Data: <&#216;&#232;&#160;&#238;&#183;           > D8 E8 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001B7EEA0F1A0, 16 bytes long.
 Data: <&#176;&#232;&#160;&#238;&#183;           > B0 E8 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001B7EEA073C0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{285} normal block at 0x000001B7EEA0EC50, 16 bytes long.
 Data: <&#184;&#224;&#160;&#238;&#183;           > B8 E0 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001B7EEA08F00, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{283} normal block at 0x000001B7EEA0AC90, 16 bytes long.
 Data: < &#224;&#160;&#238;&#183;           > 90 E0 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001B7EEA0AC40, 16 bytes long.
 Data: <h&#224;&#160;&#238;&#183;           > 68 E0 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001B7EEA0AA10, 16 bytes long.
 Data: <@&#224;&#160;&#238;&#183;           > 40 E0 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001B7EEA0A970, 16 bytes long.
 Data: < &#224;&#160;&#238;&#183;           > 18 E0 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001B7EEA0ABA0, 16 bytes long.
 Data: <&#240;&#223;&#160;&#238;&#183;           > F0 DF A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001B7EEA0A6F0, 16 bytes long.
 Data: <&#200;&#223;&#160;&#238;&#183;           > C8 DF A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001B7EEA085A0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{275} normal block at 0x000001B7EEA0A650, 16 bytes long.
 Data: <&#160;&#223;&#160;&#238;&#183;           > A0 DF A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001B7EEA0DFA0, 320 bytes long.
 Data: <P&#166;&#160;&#238;&#183;   &#160;&#133;&#160;&#238;&#183;   > 50 A6 A0 EE B7 01 00 00 A0 85 A0 EE B7 01 00 00 
{273} normal block at 0x000001B7EEA0B2D0, 16 bytes long.
 Data: < &#232;&#160;&#238;&#183;           > 90 E8 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001B7EEA0B050, 16 bytes long.
 Data: <h&#232;&#160;&#238;&#183;           > 68 E8 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001B7EEA08D80, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{270} normal block at 0x000001B7EEA0B320, 16 bytes long.
 Data: <@&#232;&#160;&#238;&#183;           > 40 E8 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001B7EEA08540, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{268} normal block at 0x000001B7EEA0AF60, 16 bytes long.
 Data: < &#231;&#160;&#238;&#183;           > 88 E7 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001B7EEA0AF10, 16 bytes long.
 Data: <`&#231;&#160;&#238;&#183;           > 60 E7 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001B7EEA0A920, 16 bytes long.
 Data: <8&#231;&#160;&#238;&#183;           > 38 E7 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001B7EEA0A790, 16 bytes long.
 Data: < &#231;&#160;&#238;&#183;           > 10 E7 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001B7EEA0A6A0, 16 bytes long.
 Data: <&#232;&#230;&#160;&#238;&#183;           > E8 E6 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001B7EEA0AE20, 16 bytes long.
 Data: <&#192;&#230;&#160;&#238;&#183;           > C0 E6 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001B7EEA0A560, 16 bytes long.
 Data: <`v&#160;&#238;&#183;           > 60 76 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001B7EEA07660, 40 bytes long.
 Data: <`&#165;&#160;&#238;&#183;   &#240;&#181; &#242;&#183;   > 60 A5 A0 EE B7 01 00 00 F0 B5 06 F2 B7 01 00 00 
{259} normal block at 0x000001B7EEA0A4C0, 16 bytes long.
 Data: <&#160;&#230;&#160;&#238;&#183;           > A0 E6 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001B7EEA0B0A0, 16 bytes long.
 Data: <x&#230;&#160;&#238;&#183;           > 78 E6 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x000001B7EEA084E0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{256} normal block at 0x000001B7EEA0AD80, 16 bytes long.
 Data: <P&#230;&#160;&#238;&#183;           > 50 E6 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000001B7EEA0E650, 992 bytes long.
 Data: < &#173;&#160;&#238;&#183;   &#224;&#132;&#160;&#238;&#183;   > 80 AD A0 EE B7 01 00 00 E0 84 A0 EE B7 01 00 00 
{91} normal block at 0x000001B7EEA08F60, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{90} normal block at 0x000001B7EEA0AFB0, 16 bytes long.
 Data: < u&#160;&#238;&#183;           > 80 75 A0 EE B7 01 00 00 00 00 00 00 00 00 00 00 
{89} normal block at 0x000001B7EEA07580, 40 bytes long.
 Data: <&#176;&#175;&#160;&#238;&#183;   ` &#160;&#238;&#183;   > B0 AF A0 EE B7 01 00 00 60 8F A0 EE B7 01 00 00 
{68} normal block at 0x000001B7EEA0B370, 16 bytes long.
 Data: < &#234;`y&#247;           > 80 EA 60 79 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001B7EEA0B3C0, 16 bytes long.
 Data: <@&#233;`y&#247;           > 40 E9 60 79 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001B7EEA0A830, 16 bytes long.
 Data: <&#248;W]y&#247;           > F8 57 5D 79 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001B7EEA0A880, 16 bytes long.
 Data: <&#216;W]y&#247;           > D8 57 5D 79 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001B7EEA0B140, 16 bytes long.
 Data: <P ]y&#247;           > 50 04 5D 79 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001B7EEA0ADD0, 16 bytes long.
 Data: <0 ]y&#247;           > 30 04 5D 79 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001B7EEA0ACE0, 16 bytes long.
 Data: <&#224; ]y&#247;           > E0 02 5D 79 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001B7EEA0AB50, 16 bytes long.
 Data: <  ]y&#247;           > 10 04 5D 79 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001B7EEA0A600, 16 bytes long.
 Data: <p ]y&#247;           > 70 04 5D 79 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000001B7EEA0A7E0, 16 bytes long.
 Data: < &#192;[y&#247;           > 18 C0 5B 79 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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