Task 38607026

Name hif2a_A17_A16_r0_2-QUICO_ATM_GAFF2_NAGL_hif2a-0-6-RND0041_2
Workunit 31560341
Created 14 Apr 2026, 8:30:32 UTC
Sent 14 Apr 2026, 8:31:02 UTC
Report deadline 19 Apr 2026, 8:31:02 UTC
Received 14 Apr 2026, 15:20:52 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 630817
Run time 3 hours 54 min 57 sec
CPU time 3 hours 54 min 57 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 13,450.96 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 504.43 MB
Peak swap size 24.58 GB
Peak disk usage 2.87 GB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
14:57:40 (7584): wrapper (7.9.26016): starting
14:57:40 (7584): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A17_A16_0.pdb
QB_A17_A16_0.xml
QB_A17_A16.inpcrd
QB_A17_A16_input.yaml
QB_A17_A16.pdb
QB_A17_A16.prmtop
QB_A17_A16_sys.xml
run.bat
run.sh
14:57:42 (7584): Library/usr/bin/tar.exe exited; CPU time 0.000000
14:57:42 (7584): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\66\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\66\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
18:20:29 (7584): C:/Windows/system32/cmd.exe exited; CPU time 14097.187500
18:20:29 (7584): called boinc_finish(0)
0 bytes in 0 Free Blocks.
616 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 167745207 bytes.
Dumping objects ->
{3835311} normal block at 0x00000275FE490920, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835300} normal block at 0x00000275FE490DF0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835289} normal block at 0x00000275FE4913A0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835278} normal block at 0x00000275FE491410, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835267} normal block at 0x00000275FE4916B0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835236} normal block at 0x00000275FE53A400, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835225} normal block at 0x00000275FE5E0D00, 180 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835222} normal block at 0x00000275FC7F7D10, 8 bytes long.
 Data: <  o&#252;u   > 00 00 6F FC 75 02 00 00 
{3834576} normal block at 0x00000275FE5E0FD0, 180 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833943} normal block at 0x00000275FC7F7F40, 8 bytes long.
 Data: <&#144;&#135;Y&#254;u   > 90 87 59 FE 75 02 00 00 
..\zip\boinc_zip.cpp(122) : {303} normal block at 0x00000275FC800D30, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000275FC7E5A30, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{287} normal block at 0x00000275FC8029A0, 16 bytes long.
 Data: <h3&#128;&#252;u           > 68 33 80 FC 75 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000275FC802950, 16 bytes long.
 Data: <@3&#128;&#252;u           > 40 33 80 FC 75 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000275FC7FD440, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{284} normal block at 0x00000275FC802900, 16 bytes long.
 Data: < 3&#128;&#252;u           > 18 33 80 FC 75 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000275FC802400, 16 bytes long.
 Data: <&#240;2&#128;&#252;u           > F0 32 80 FC 75 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000275FC801DC0, 16 bytes long.
 Data: <&#200;2&#128;&#252;u           > C8 32 80 FC 75 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000275FC801D20, 16 bytes long.
 Data: <&#160;2&#128;&#252;u           > A0 32 80 FC 75 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000275FC7FC500, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{279} normal block at 0x00000275FC802540, 16 bytes long.
 Data: < &#171;~&#252;u           > 98 AB 7E FC 75 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000275FC7FDCE0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{277} normal block at 0x00000275FC802040, 16 bytes long.
 Data: <p&#171;~&#252;u           > 70 AB 7E FC 75 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000275FC802A90, 16 bytes long.
 Data: <H&#171;~&#252;u           > 48 AB 7E FC 75 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000275FC801EB0, 16 bytes long.
 Data: < &#171;~&#252;u           > 20 AB 7E FC 75 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000275FC8028B0, 16 bytes long.
 Data: <&#248;&#170;~&#252;u           > F8 AA 7E FC 75 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000275FC802360, 16 bytes long.
 Data: <&#208;&#170;~&#252;u           > D0 AA 7E FC 75 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000275FC801C80, 16 bytes long.
 Data: <&#168;&#170;~&#252;u           > A8 AA 7E FC 75 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000275FC7FD500, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{269} normal block at 0x00000275FC802310, 16 bytes long.
 Data: <&#128;&#170;~&#252;u           > 80 AA 7E FC 75 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000275FC7EAA80, 320 bytes long.
 Data: < #&#128;&#252;u    &#213; &#252;u   > 10 23 80 FC 75 02 00 00 00 D5 7F FC 75 02 00 00 
{267} normal block at 0x00000275FC802810, 16 bytes long.
 Data: <&#128;2&#128;&#252;u           > 80 32 80 FC 75 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000275FC802B80, 16 bytes long.
 Data: <X2&#128;&#252;u           > 58 32 80 FC 75 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000275FC7FDBC0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{264} normal block at 0x00000275FC801E60, 16 bytes long.
 Data: <02&#128;&#252;u           > 30 32 80 FC 75 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000275FC7FDC80, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{262} normal block at 0x00000275FC802BD0, 16 bytes long.
 Data: <x1&#128;&#252;u           > 78 31 80 FC 75 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000275FC802180, 16 bytes long.
 Data: <P1&#128;&#252;u           > 50 31 80 FC 75 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x00000275FC8023B0, 16 bytes long.
 Data: <(1&#128;&#252;u           > 28 31 80 FC 75 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x00000275FC8025E0, 16 bytes long.
 Data: < 1&#128;&#252;u           > 00 31 80 FC 75 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x00000275FC801E10, 16 bytes long.
 Data: <&#216;0&#128;&#252;u           > D8 30 80 FC 75 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x00000275FC801CD0, 16 bytes long.
 Data: <&#176;0&#128;&#252;u           > B0 30 80 FC 75 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x00000275FC802860, 16 bytes long.
 Data: < &#193; &#252;u           > 10 C1 7F FC 75 02 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x00000275FC7FC110, 40 bytes long.
 Data: <`(&#128;&#252;u    &#164;S&#254;u   > 60 28 80 FC 75 02 00 00 00 A4 53 FE 75 02 00 00 
{253} normal block at 0x00000275FC8027C0, 16 bytes long.
 Data: <&#144;0&#128;&#252;u           > 90 30 80 FC 75 02 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x00000275FC802720, 16 bytes long.
 Data: <h0&#128;&#252;u           > 68 30 80 FC 75 02 00 00 00 00 00 00 00 00 00 00 
{251} normal block at 0x00000275FC7FE0A0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{250} normal block at 0x00000275FC8022C0, 16 bytes long.
 Data: <@0&#128;&#252;u           > 40 30 80 FC 75 02 00 00 00 00 00 00 00 00 00 00 
{249} normal block at 0x00000275FC803040, 992 bytes long.
 Data: <&#192;"&#128;&#252;u   &#160;&#224; &#252;u   > C0 22 80 FC 75 02 00 00 A0 E0 7F FC 75 02 00 00 
{85} normal block at 0x00000275FC7FDE60, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{84} normal block at 0x00000275FC7F81C0, 16 bytes long.
 Data: <P&#198; &#252;u           > 50 C6 7F FC 75 02 00 00 00 00 00 00 00 00 00 00 
{83} normal block at 0x00000275FC7FC650, 40 bytes long.
 Data: <&#192;&#129; &#252;u   `&#222; &#252;u   > C0 81 7F FC 75 02 00 00 60 DE 7F FC 75 02 00 00 
{62} normal block at 0x00000275FC7F8120, 16 bytes long.
 Data: <&#128;&#234;&#149;&#213;&#247;           > 80 EA 95 D5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x00000275FC7F75E0, 16 bytes long.
 Data: <@&#233;&#149;&#213;&#247;           > 40 E9 95 D5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x00000275FC7F7590, 16 bytes long.
 Data: <&#248;W&#146;&#213;&#247;           > F8 57 92 D5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x00000275FC7F74A0, 16 bytes long.
 Data: <&#216;W&#146;&#213;&#247;           > D8 57 92 D5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x00000275FC7F7A40, 16 bytes long.
 Data: <P &#146;&#213;&#247;           > 50 04 92 D5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x00000275FC7F7B80, 16 bytes long.
 Data: <0 &#146;&#213;&#247;           > 30 04 92 D5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x00000275FC7F7770, 16 bytes long.
 Data: <&#224; &#146;&#213;&#247;           > E0 02 92 D5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x00000275FC7F8170, 16 bytes long.
 Data: <  &#146;&#213;&#247;           > 10 04 92 D5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{54} normal block at 0x00000275FC7F8030, 16 bytes long.
 Data: <p &#146;&#213;&#247;           > 70 04 92 D5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{53} normal block at 0x00000275FC7F7E50, 16 bytes long.
 Data: < &#192;&#144;&#213;&#247;           > 18 C0 90 D5 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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