Task 38606588

Name hif2a_A18_A08_r0_4-QUICO_ATM_GAFF2_NAGL_hif2a-0-6-RND0485_0
Workunit 31560365
Created 14 Apr 2026, 8:09:48 UTC
Sent 14 Apr 2026, 8:12:12 UTC
Report deadline 19 Apr 2026, 8:12:12 UTC
Received 16 Apr 2026, 20:38:39 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 487743
Run time 5 hours 15 min 9 sec
CPU time 5 hours 4 min 45 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 7,320.33 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 475.99 MB
Peak swap size 12.44 GB
Peak disk usage 2.87 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
17:24:32 (656): wrapper (7.9.26016): starting
17:24:32 (656): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A18_A08_0.pdb
QB_A18_A08_0.xml
QB_A18_A08.inpcrd
QB_A18_A08_input.yaml
QB_A18_A08.pdb
QB_A18_A08.prmtop
QB_A18_A08_sys.xml
run.bat
run.sh
17:24:33 (656): Library/usr/bin/tar.exe exited; CPU time 0.015625
17:24:33 (656): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\22\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\22\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
22:38:11 (656): C:/Windows/system32/cmd.exe exited; CPU time 18285.750000
22:38:11 (656): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 287243477 bytes.
Dumping objects ->
{3835308} normal block at 0x0000022DD21EE500, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835297} normal block at 0x0000022DD21EE730, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835286} normal block at 0x0000022DD21EE340, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835275} normal block at 0x0000022DD21EE420, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835264} normal block at 0x0000022DD21C3310, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835233} normal block at 0x0000022DD3E7B710, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835222} normal block at 0x0000022DD3E920C0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835219} normal block at 0x0000022DD21BDDF0, 8 bytes long.
 Data: <  s&#210;-   > 00 00 73 D2 2D 02 00 00 
{3834585} normal block at 0x0000022DD3E92590, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833965} normal block at 0x0000022DD21BD8A0, 8 bytes long.
 Data: <&#224;  &#210;-   > E0 19 1B D2 2D 02 00 00 
..\zip\boinc_zip.cpp(122) : {314} normal block at 0x0000022DD21B6520, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x0000022DD21B4D80, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{298} normal block at 0x0000022DD21C98A0, 16 bytes long.
 Data: <X&#159; &#210;-           > 58 9F 1C D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x0000022DD21C98F0, 16 bytes long.
 Data: <0&#159; &#210;-           > 30 9F 1C D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000022DD21C4C00, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{295} normal block at 0x0000022DD21C9B70, 16 bytes long.
 Data: < &#159; &#210;-           > 08 9F 1C D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000022DD21C8D60, 16 bytes long.
 Data: <&#224;&#158; &#210;-           > E0 9E 1C D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000022DD21C8FE0, 16 bytes long.
 Data: <&#184;&#158; &#210;-           > B8 9E 1C D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000022DD21C9760, 16 bytes long.
 Data: < &#158; &#210;-           > 90 9E 1C D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000022DD21C3380, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{290} normal block at 0x0000022DD21C9B20, 16 bytes long.
 Data: <(@ &#210;-           > 28 40 1B D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000022DD21C4900, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{288} normal block at 0x0000022DD21C9710, 16 bytes long.
 Data: < @ &#210;-           > 00 40 1B D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000022DD21C8D10, 16 bytes long.
 Data: <&#216;? &#210;-           > D8 3F 1B D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000022DD21C9940, 16 bytes long.
 Data: <&#176;? &#210;-           > B0 3F 1B D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000022DD21C9850, 16 bytes long.
 Data: < ? &#210;-           > 88 3F 1B D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000022DD21C96C0, 16 bytes long.
 Data: <`? &#210;-           > 60 3F 1B D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000022DD21C9350, 16 bytes long.
 Data: <8? &#210;-           > 38 3F 1B D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000022DD21C4F00, 32 bytes long.
 Data: <CUDA_DEVICE=1 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 31 00 50 55 
{280} normal block at 0x0000022DD21C8E50, 16 bytes long.
 Data: < ? &#210;-           > 10 3F 1B D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000022DD21B3F10, 320 bytes long.
 Data: <P&#142; &#210;-    O &#210;-   > 50 8E 1C D2 2D 02 00 00 00 4F 1C D2 2D 02 00 00 
{278} normal block at 0x0000022DD21C8E00, 16 bytes long.
 Data: <p&#158; &#210;-           > 70 9E 1C D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000022DD21C8DB0, 16 bytes long.
 Data: <H&#158; &#210;-           > 48 9E 1C D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000022DD21C5200, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{275} normal block at 0x0000022DD21C8F90, 16 bytes long.
 Data: < &#158; &#210;-           > 20 9E 1C D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000022DD21C4BA0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{273} normal block at 0x0000022DD21C9620, 16 bytes long.
 Data: <h  &#210;-           > 68 9D 1C D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000022DD21C9580, 16 bytes long.
 Data: <@  &#210;-           > 40 9D 1C D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000022DD21C9530, 16 bytes long.
 Data: <   &#210;-           > 18 9D 1C D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000022DD21C9670, 16 bytes long.
 Data: <&#240;&#156; &#210;-           > F0 9C 1C D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000022DD21C94E0, 16 bytes long.
 Data: <&#200;&#156; &#210;-           > C8 9C 1C D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000022DD21C8F40, 16 bytes long.
 Data: <&#160;&#156; &#210;-           > A0 9C 1C D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000022DD21C9A30, 16 bytes long.
 Data: <02 &#210;-           > 30 32 1C D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000022DD21C3230, 40 bytes long.
 Data: <0&#154; &#210;-    &#183;&#231;&#211;-   > 30 9A 1C D2 2D 02 00 00 10 B7 E7 D3 2D 02 00 00 
{264} normal block at 0x0000022DD21C9440, 16 bytes long.
 Data: < &#156; &#210;-           > 80 9C 1C D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000022DD21C9AD0, 16 bytes long.
 Data: <X&#156; &#210;-           > 58 9C 1C D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000022DD21C46C0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{261} normal block at 0x0000022DD21C95D0, 16 bytes long.
 Data: <0&#156; &#210;-           > 30 9C 1C D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000022DD21C9C30, 992 bytes long.
 Data: <&#208;&#149; &#210;-   &#192;F &#210;-   > D0 95 1C D2 2D 02 00 00 C0 46 1C D2 2D 02 00 00 
{96} normal block at 0x0000022DD21C4960, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{95} normal block at 0x0000022DD21BD530, 16 bytes long.
 Data: < 6 &#210;-           > 20 36 1C D2 2D 02 00 00 00 00 00 00 00 00 00 00 
{94} normal block at 0x0000022DD21C3620, 40 bytes long.
 Data: <0&#213; &#210;-   `I &#210;-   > 30 D5 1B D2 2D 02 00 00 60 49 1C D2 2D 02 00 00 
{73} normal block at 0x0000022DD21BD3A0, 16 bytes long.
 Data: < &#234;M&#244;&#247;           > 80 EA 4D F4 F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x0000022DD21BDF80, 16 bytes long.
 Data: <@&#233;M&#244;&#247;           > 40 E9 4D F4 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000022DD21BD710, 16 bytes long.
 Data: <&#248;WJ&#244;&#247;           > F8 57 4A F4 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000022DD21BD7B0, 16 bytes long.
 Data: <&#216;WJ&#244;&#247;           > D8 57 4A F4 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000022DD21BD440, 16 bytes long.
 Data: <P J&#244;&#247;           > 50 04 4A F4 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000022DD21BDF30, 16 bytes long.
 Data: <0 J&#244;&#247;           > 30 04 4A F4 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000022DD21BD350, 16 bytes long.
 Data: <&#224; J&#244;&#247;           > E0 02 4A F4 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000022DD21BDD00, 16 bytes long.
 Data: <  J&#244;&#247;           > 10 04 4A F4 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000022DD21BE110, 16 bytes long.
 Data: <p J&#244;&#247;           > 70 04 4A F4 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000022DD21BD6C0, 16 bytes long.
 Data: < &#192;H&#244;&#247;           > 18 C0 48 F4 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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